Pangasianodon hypophthalmus (striped catfish): 113530697
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Entry
113530697 CDS
T05759
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113530697
03036 Chromosome and associated proteins [BR:
phyp03036
]
113530697
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113530697
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113530697
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113530697
UBL E3 ligases
113530697
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
113530697
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113530697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
zf-ANAPC11
zf_PCFS4
zf-RING_10
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
113530697
NCBI-ProteinID:
XP_026776735
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MMAPTKMKLRVRKKEKASVKSSQQQQQQQQQQPLRPETSPDSKCPICLDRFVNVASVERC
LHRFCFRCIREWAKNKAECPLCKQPFRSIFHSVKAENDFKEFVVLEDNTQSATTSASATV
TMTAAAIAATPAGQNDAESTATRTRRSRATRTRQRRSQRAQDPAPSASSIDGVALDHATL
MQRDPACLRQLLPWLRRERVMGTNPSELRPFLLARTDHILHELVSFARSIEAMQCPPAPS
YEEDSGSQSSIINISEDDDDSEEADVTEDNPQDRAPPVPMATSSEISLSQSAWDDETPGP
SYSTLSHPQTEEVQPDGNQLEGTNAATEQREHNDEEEECMIVGYVKPMAERTPELVQLSS
DSTEEEEQEQGRNEAAATETVMKAESSVPSHEQAPLSPKPYPSTSHTETGENLEQSREQD
AGKHSRHRRKEHTPRRGFRKPSRSLSGSRSQTSSESSPQSGHSVKISRSHVRLSCREPRR
QGHHLLGRSPTAFAERDGSSSEDLVQTRSLSTRDRSSKPFSPWDSPGHDGERKRKRRKRR
RERETERSRSPHRESRHRHGDRELWLRSSSSSSDAGSRREKPAGKRKYKTRHLERTARRR
SSRKSRERERSPSVEIIFERRASDTHSRDRRRKRRNRRKEREQNSPTIITIDSDSSSDHT
GQNRHTQANRHTADYRNRLLDNDKDDVANDHTVDYQDGTADDNERVTDFSDHTIDYQERL
AEFSDRTADDKDCFTDGRNCTNDYKDHVSDQNCETLFTGRTPEYKDGAAGVSSQTSDYKD
KVTGVGDYTTDYRRGGEKVSDQAAEHRDHAADVSCRSADYGRGDTEVHSNNADRVKDRVK
EVSSYPRPCDAEVNDRTADYQESLLDVDDSPDDFQDSITDIRNRGASVLDMLNLEHCLVD
VVQPNRRVDDDSRRAATPLSDTRLLELEDSLLGEGQGTLGNVTVDQQEAGLVDHRDQSEA
EREQADVTRDSRVSAEMSPDV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcccacaaagatgaagctgcgtgtgaggaagaaggagaaagcctcagtgaag
tcgtctcagcagcagcagcagcagcagcagcagcagccgctccgtcccgagacgtccccg
gactcgaagtgtccgatctgcctggaccgctttgtgaacgtggcgtctgtggagcgctgc
ctgcaccgtttctgcttccgctgcatccgcgagtgggccaagaacaaagcggagtgtccg
ctgtgcaagcagccgttccgctccatcttccactcggtgaaggctgagaacgacttcaaa
gagttcgtggtgctggaggacaacacgcagagcgcgaccacgtcggcttcagcgactgtt
acaatgactgcagcagcgatagcggcgacccccgctggccaaaacgacgctgaaagcaca
gcgacacgaactcggcgttccagagcaacgaggaccaggcagaggcggagtcagagagct
caagaccccgccccttctgcttcctcgatagatggcgtagcattggaccacgcgacgttg
atgcagcgagatccagcgtgcctgcgacagctgctgccatggctacgccgcgagcgagtc
atgggaaccaatcccagtgagctccgccccttcctgctggcacgcactgaccacatcctg
cacgagctggtgagctttgcacgctccatcgaggccatgcagtgtcctccggccccaagc
tacgaggaggacagcggctcccagtcctccataatcaacatctcagaggacgacgatgat
agcgaggaagcagatgtcaccgaggacaacccccaggatcgcgcacccccggttcccatg
gcaactagtagcgaaatctctctcagccaatccgcctgggacgacgagactccaggcccc
tcctactccaccctcagccatccacaaacggaggaagtccagcctgacgggaaccaatta
gaaggaaccaacgcagccacggaacagcgggaacacaacgatgaagaggaagagtgtatg
atcgtgggttacgtgaagccgatggctgaacggactccagaactcgtgcagctctcatct
gactccactgaggaggaggagcaggagcaggggaggaacgaggcagctgccacggagacc
gtaatgaaggcggagtcgtcggtgccatctcacgagcaggctccactctctccgaagccg
tatccctccacctcccacacggagacaggagagaacctggagcagtcgcgagagcaagat
gctgggaagcactcgcgtcacaggaggaaggaacacactccgaggcgtggcttcaggaag
ccgtcacgctcgctttcagggtcacgttcccagacgagtagtgagagttctccccagagt
ggacattctgtaaaaatcagcagatcccatgtgaggttgagctgccgagagccaaggagg
cagggtcaccacttattagggcggagccccaccgctttcgccgaaagagacggctcatct
tcagaggacctcgttcaaacgcgttccctttctacacgagacagatcatccaagcctttc
tcgccatgggattcgcccgggcacgacggcgagcgcaagaggaagaggaggaagaggaga
agagagagagaaaccgagaggagtagatctcctcatcgggagtcacggcatcgccacggt
gaccgcgagctctggcttcgcagcagcagcagcagcagcgatgcgggttcacgtcgggaa
aaacctgctgggaaacgcaaatacaaaacgcggcacctggagagaacggctcgccggcgg
agcagcaggaagtcgagggagagggaacgaagtccgagcgtggagatcatcttcgagcgc
cgggcctctgatacacactcgagggacaggaggcgcaaaaggaggaatcggagaaaagag
agagagcagaactcgcctactattatcactatagacagcgacagcagcagcgatcacacc
ggtcagaaccgtcatacgcaggctaacagacacaccgctgactatcggaaccggctactg
gacaatgacaaagacgacgtagctaatgatcacaccgtcgactatcaggatggcaccgct
gacgacaacgagcgcgttacggacttcagcgatcacaccattgattatcaggaacgtctt
gctgagttcagcgatcgtaccgctgacgataaagactgttttacagacggcagaaattgc
accaacgactataaagatcacgttagcgatcagaactgtgaaacattgttcactggccgt
acgccggaatataaagacggcgctgcaggtgttagcagtcaaacctctgattataaagat
aaagttacgggggttggcgattacaccactgactacagacgtggtggtgagaaggttagt
gatcaggccgctgagcatcgagaccacgctgcagacgttagctgtcgctctgctgattat
ggacgcggtgatacggaggttcacagtaacaacgctgatcgggttaaagatcgcgttaaa
gaggtaagtagttaccctcggccttgtgatgcggaggttaacgatcgcaccgctgactat
caggagtcgcttctggatgttgacgacagtccagacgattttcaggactccattacggat
atcaggaacagaggtgcgagtgtgttggacatgctgaacctggagcactgcctggtggac
gtggtgcagccaaacaggagagtcgatgacgacagccgcagggcagcgactccgctctcg
gacacgcggctgctggaactagaggacagtctgttgggggaggggcaagggacgcttggg
aatgttaccgtggaccagcaggaggcggggcttgtggatcacagggaccaatcagaggcg
gagagagaacaggctgatgtgacgagggactctcgtgttagtgcagagatgagccctgat
gtatag
DBGET
integrated database retrieval system
