Pangasianodon hypophthalmus (striped catfish): 113530715
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Entry
113530715 CDS
T05759
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04110
Cell cycle
phyp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113530715 (smc1a)
04114 Oocyte meiosis
113530715 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113530715 (smc1a)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113530715 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
113530715 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113530715
NCBI-ProteinID:
XP_026776760
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFRKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRACVSMVYCEDNGDERTFTRVIIGASSEYRIDNKVVGLSDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYERRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRANVQLQLFKLYHNESEIEKLNR
ELSQRNREIEKDRKKMDHIEEELKDKKRELGRMMREQQNVEKEIKEKDAELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMEELDREQGAVEMARQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQRRMEEELTEEVELAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIRRIIQSRERDITQLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYERNQLKEDQEKVMMWEQ
TVKKDESEIERLKKEEHRQMKIIDETMAQLQDLKNQHLTKKGEVNDKNREMEDIRKKLGS
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLKSGTMDDISQEEGGSQVD
ESISSHKTSSSVHAKEALIEIDYSNLHEDLKDALSEEEIKIEMNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSLQNFQAVVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSQYPDANPNPND
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggctatctgaaactaattgagattgaaaatttcaaatcttataaaggccgacaaata
atcggacctttccgcaaattcacggctataatcggaccgaacggctcgggaaaatccaac
ctgatggacgccatcagttttgtcctggcagaaaagaccagtaacctccgtgttaagaca
ctgaaagacctgatccacggtgcgcctgtaggaaagcctgcagctaaccgtgcatgtgtc
agtatggtgtactgtgaggataacggtgatgagcgcacattcacacgagtcataatcggt
gcctcttctgaataccggattgacaacaaggtggttggactctcagactacagtgaggaa
ctggagaaactgggtatcctcatcaaggccaggaacttcctagtatttcagggtgccgtt
gagtccatagccatgaaaaaccccaaagagagaacagctctgtttgaggagatctcccgc
tctggggaactagctcaggagtacgagcggaggaagaaagagatggtgaaggcagaagag
gacacccagttcaattaccaccgtaagaagaacattgcagctgagcgcaaagaggccaag
caggagaaagaggaggctgagcgttaccagagactgaaggacgaggttgttagagctaat
gtgcagttgcagcttttcaagctctaccacaatgagtctgagattgagaagctcaaccga
gagctctcccaacgcaaccgggagattgagaaagacagaaagaagatggatcatatcgaa
gaggagctgaaggacaagaagagagaactggggaggatgatgagggagcagcagaacgtg
gagaaggagataaaagagaaggatgctgagctgaaccagaaacggcctcagtacattaag
gccaaggagaacacctcacacaagataaagaagctggaggcggcacgcaagtctctgcag
aacgctcagaagatgtacaagaagcgtaaagcagacatggaggagctggaccgagaacag
ggagctgtggagatggccaggcaggagtttgaggagcgcatggaggaggaggctcagagt
caaggccaggacctcactctggaggagaaccaggtaaagcaataccacaggctgaaggag
gaggcgagtaagcgagcagccactctggcacaggagctggagaagttcaaccgggatcag
aaagctgaccaggacagactggatctagaggagaggaagaaagtggagactgaggccaaa
atcaagcagaaaatcagagagattgaggaaaaccagaaacgtattgagaaattggaagat
tacattgcgaccagcaggcagtcattagatgaacagaggaggatggaggaggagctgact
gaggaagtggagctcgccaaaaggaggattgatgagataaacatggaattaaaccaggtg
atggagcaacttggggatgcgagaattgacaggcaggaaaatagccgtcagcagcgcaaa
gctgagatcatggagagcatcaagaggctgtaccctggctctgtatacggcagacttatt
gacctgtgccagcccacacaaaagaaatatcagattgctgtgacgaaagttctgggaaag
aacatggatgccatcattgtggactcagagaagacaggtagagactgcatccagtacatc
aaagagcaaagaggagaaccagagacttttctgcccctggactacctagaggtgaaaccc
acagatgaaaaattaagggagctgcgaggggccaagctggtgattgacgtgatccgctat
gagccacctcacattaagaaagctttgcagtatgcctgtggaaatgctctcgtgtgtgag
aatgtagaggatgcacgcaggattgcctttggagggccttacaggcataagactgtagct
ttggatggcactcttttccaaaagtctggggtgatctctggaggagcaagtgacctcaaa
gcgaaggctcgacgctgggatgaaaaagccgtggacaaacttaaagacaaaaaagagaag
ctaactgaggagctcaaggagcaaatgaaggcaaagaggaaggaagcagagctgaggcag
gtgcagtctcaggcccatggcttacaaatgagactgaagtactctcagagtgacctggaa
cagactaaaacacgccacctgtcccttaacatgcaggagaagtcaaagctggagagcgaa
ctggcaaattttggaccccgaatcaatgatatcaggagaatcatccagtcacgtgagaga
gacatcacacagctgagagaccgcatgaacctggtggaggatgaggtatttgtggaattc
tgcaaagagattggagtgagaaatatccgagagtttgaggaagagaaagttaaaagacag
aatgagattgccaaaaaacgacttgaattcgagacccagaagacccgcttagccattcag
ctggactatgagaggaaccaactgaaggaagaccaggagaaagtgatgatgtgggagcag
actgtgaagaaagatgagagtgagattgaaagacttaaaaaggaagagcacagacagatg
aagatcattgacgagaccatggctcagctgcaggacctcaaaaaccagcacctcactaaa
aaaggagaggtcaatgacaagaaccgagagatggaggatatccgcaagaaactagggtct
gccaacaaagagctgactcagctccagaaagaggtgacggctattgagacaaagctggag
cagaagcgcagtgacaggcacaaccttctgcaggcctgcaagatgcaggacatcaaactg
cccctcaaatcaggaaccatggatgacatcagccaggaagagggaggctcccaagttgat
gagtccatcagcagccacaaaacctccagctctgtgcatgccaaggaggctctcattgaa
atcgactacagcaacttgcatgaggatctcaaagacgctttgtctgaggaagagatcaag
attgagatgaacactttgcagcagaggctgaatgagcagcagagcatcctccagcgcatc
agtgctcccaacatgaaggccatggagaagttggagagcgtcagggacaagttccaggag
actagtgatgagtttgaagcagcacgaaagagagctaagaaggccaagcaggcatttgag
cagattaagaaggagaggtttgaccgatttaatacctgctttgagtctgtcgccaccaat
attgatgaaatctacaaagccctctctcgtaacagcagtgcacaggcattcctaggccca
gagaaccctgaggagccatacttagatgggatcaattacaactgtgtggctccgggaaag
agattcaggccgatggacaacctgtctggaggtgagaagacagtcgcagccctcgctctg
cttttcgccattcacagctacaagcctgctcctttttttgtccttgatgagattgatgct
gcgcttgataacacgaacattggcaaggtggccaattacataaaagatcagtcgctccaa
aacttccaggcagttgtcatttcattgaaagaagagttttacaccaaggctgattctctc
ataggagtttaccctgagcaaggagactgtgtcatcagcaaggtgctgacctttgacctc
tcccagtatcctgatgccaatccaaatcccaacgattga
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