KEGG   Pangasianodon hypophthalmus (striped catfish): 113530730
Entry
113530730         CDS       T05759                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113530730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113530730
   03041 Spliceosome [BR:phyp03041]
    113530730
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     113530730
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113530730
Spliceosome [BR:phyp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    113530730
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_PARP14_1
Other DBs
NCBI-GeneID: 113530730
NCBI-ProteinID: XP_026776790
LinkDB
Position
Unknown
AA seq 372 aa
MPKEEQPREPEQLRKLFIGGLSFETTDDSLRSYFEQWGTLTDCVVMRDPNSKRSRGFGFV
TYSCVDEVDAAMQARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKEDTEESH
LRDYFQEFGKIEAIEIMIDHKTGNKRGFAFVTFDDHDAVDRIVIQKYHTINGHNSEVRKA
LSKQEMQNSSMNMRGRGGGNFDGRYGNNDFGGGRDGFRDGFRGGRGGSGGYGGGDGYNNG
FGGDGGYGGGGPGYGGNRGGGYGGGGPGYGGYGGGGYGGGGGGGYGGGGNNYDNYNNGNG
NFGGGNFGGGGGGGGGGNYNDFGNYNNQQSNFGPMKGNFGGGGRNSGPYGGGYGGSSGGG
GGYGGGSGGRRY
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgccaaaggaggaacagccacgagaaccggagcagctccggaagttgttcattgggggc
ctcagcttcgagacaacagacgacagcctgcgctcttattttgagcaatggggcacgtta
accgactgtgtggttatgagagacccgaactccaagcgctccagaggcttcggttttgtc
acatactcctgtgtggacgaagtcgatgccgccatgcaggcacgtcctcacaaagtcgat
ggtcgtcttgtagagcccaaacgtgctgtgtctagagaggattccaacaaaccttttgca
cacaccacagtgaaaaagatctttgtgggtggcattaaggaggatacagaagagagccac
ctacgagactacttccaggaatttggaaagatcgaagcaattgaaataatgatcgatcat
aagactggcaacaaaagaggctttgcgtttgttacgttcgacgatcatgatgctgtggat
cgtatcgttattcaaaagtaccacacaataaatggccataattcagaagtgaggaaggct
ctctctaaacaagagatgcagaattcatcaatgaacatgagagggcgtggaggtggaaac
tttgatggtcgatatggcaacaatgactttggaggaggcagagatggattcagggatgga
ttcagaggaggcagaggaggcagtggaggatatggaggtggagatggctacaacaatgga
tttggaggagatggtggctatggtggtggcggtcctggctacggaggcaaccgtggtgga
ggatatgggggcggaggaccaggctacggtggctacggtggtggcggatatggtggtggt
ggtggcggcggatacggtggcggtggcaacaactacgacaattataacaacggcaacgga
aactttggaggtggtaacttcggaggtggaggcggcggcggtggtggtggcaactacaat
gactttgggaactacaacaaccagcagtcaaattttggccccatgaaaggaaactttggt
ggaggtggcagaaatagcggcccatatggtggtggatatgggggtagctcaggaggaggt
ggaggctatggtggtggctctggtggtagacgatattaa

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