Pangasianodon hypophthalmus (striped catfish): 113530759
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Entry
113530759 CDS
T05759
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113530759 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113530759 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
ATG17_like
EzrA
Motif
Other DBs
NCBI-GeneID:
113530759
NCBI-ProteinID:
XP_026776857
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MRTLLLLFFCGMVTTLAQEPDHPHGCTHGSCYPATGDLLVGREKNLKASSTCGLTKREPY
CIVSHLQEEKKCFQCDSRRPYNSVYNTISHRIENVITSFRPDHKKCWWQSENGKSDVYVQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFAHDCASVYPGISQGPLRN
VDDLICESRYSDIEPSTEGEVIFRVLDPAIQIEDPYSARIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAIYELVVRGNCFCYGHASECAPIDGIRDDIENMVHGRCVCKHNT
KGLNCEQCDDFHNDLPWKPAEGRNTNACKKCNCNGHSNKCHFDMAVYLATGNVSGGVCDD
CLHNTMGRNCETCKPFFYQDPARDIRDPRVCVACNCDPDGSVNGGMCDGRDDSTLGMIAG
QCRCKENVEGPRCDRCKSGFFGLSANDPQGCQPCRCDPRGTVSGSPQCDPIRGDCFCKHM
VTGRTCNQCLPEHWALSHDASGCRACECDVGGATDNQCSMESGQCRCRNHLMGRQCNQVD
TGYFFMALDYYIYEAELAKLGQGCTVEEREWQSGRPVSWTGTGFARVPEGSTLEFFINNI
PYSMEYDVLIRYEPQMPQDWEEVRVKVIRPGSIPTSSPCGNTIPADDLLTVSLPSGSRFM
VLPWSVCLERGVSYTLRLEFISYADKNSIPGFSNANILIDSIALLPRYNSLDMFVVGDPA
SILRKQIYERYRCHESAKSVSRPAMSEVCAKLIFSMSAIINDGALPCQCDPQGSLSSQCD
VRGGQCPCRPNVIGRRCDRCAPGSYGFGPAGCKACECSKEGSRSQFCDQHTGQCSCLPGA
FSQRCDSCQAGHWGFPNCRPCQCNGHTEECHQRTGVCLNCRGHTAGDQCEKCANGYYGNP
VLGSGSRCQPCPCPDGPESGRHFAASCYQDNHSRQVVCNCKQGYTGIVKRSGGTVLKRAR
CEECAPGYYGNPSQPGGRCQPCRCSNNIDLSDPESCDRRTGECLKCLYNTEGPECAVCKS
GYYGDASRRNCRKCTCNFLGTERSQCLSRDDCLCQRAKGQCQCLPHVIGLTCDHCAPNYW
NLASGHGCEPCNCDPNNAYTSACNEFTGQCQCRDGFGGKTCRDCQENFWGDPRILCRACD
CDSRGIETSQCDRLTGHCTCRQGVSGVRCDQCARGFSGIFPACQPCHQCFGDWDRIVQDL
AARTKALVARAQEIQTTGLTGAYEKHFRELEEKLAQAQSIVNARNATAEAVTNLMGMIEY
LRSRIGETTDTLTQLEGDLTAVQDSNYEASNDLSSLEREAKELNLSSERLNSQLDILKNS
NFLGAYDSIRASYNKSRDAERRTNQSTTDIPSTVSQSADTRKKTERLMAVNKDDFNRKNA
ANKRALTDLNTKVQNLDIKKINEKVCGAPGDVPCSESPCGGVDCRDDERRHCGGLNCNGA
AAVADNAMERSKHAEKELIKAMGEVEDLFKQVADAKTKAQEAKDKAQAALMKASDTKNKV
ERSNNDLRDLIKQIRAFLMQEGADPDSIEAVANQVLELSIPASPQQIRHLADEIKDRVRS
LSNVDAILDRTQDDVRKAEQLLTKARNAKNKADRVKNTADSVKQALDDARKAQAAAEKAI
QRAKDDIGTTENRLAQIQSETSASEKDLNDAMNKLGHLGQQIEALKAKRANNSMVAARAK
DTATTAQNKANEAKQDLDGELSDKYRSVQDLVGRKASAVQDAKNKAERLRDEAKQLLKDA
QDKLHRLAELEKDYEENQKTLQAKARQLDGLEDKMKMILDAINKQIQIYNTCQ
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactttgctcctgctgttcttctgtggcatggtaaccacccttgctcaagaacct
gaccaccctcatggatgtactcatggaagttgttacccagcaaccggtgacctcctggtg
ggtcgagagaagaacctgaaagcctcgtctacctgtggcctcacgaaaagagaaccctat
tgcatcgttagtcatctacaggaggagaagaaatgtttccagtgtgattcacgcagacca
tacaattctgtgtacaacactatcagtcaccgtatcgagaatgtcatcaccagcttcaga
ccagaccacaagaagtgctggtggcagtctgagaatggcaagtctgatgtttacgttcag
ctggaccttgaagcagagtttcacttcactcaccttatcatgacttttaagacgttccgt
cctgcagccatgttgattgagcgatctgcagattttgggcgtacctggcaggtgtaccgc
tactttgcccatgactgtgcatcagtctaccctggaatttctcaggggccactccgcaat
gttgatgatctcatctgtgagtcacgttattcagacattgagccgtccactgaaggagag
gtgatctttagagttctagaccctgctatccaaattgaagatccctacagtgctcgcatt
caaaaccagctgaaaatcaccaacttgcgtgtgaactttacaaagctgcacacactggga
gataatctactggactcccgggtagagatcaaggagaagtactactatgccatatatgag
ctagtcgtcaggggcaactgcttctgctatggccatgcttctgagtgcgcacccattgat
gggataagggatgacatcgaaaacatggtgcacgggaggtgcgtgtgcaagcacaataca
aaagggttgaactgtgagcagtgtgacgatttccataatgatctgccctggaaaccagcc
gagggtcgcaacaccaatgcctgcaagaagtgcaactgtaatggccactccaacaaatgt
cactttgatatggcggtgtatctggccacggggaacgtcagtggaggtgtatgtgatgac
tgccttcacaacaccatgggccgcaactgtgaaacctgtaaacccttcttctaccaggac
ccagccagagatatccgagacccccgcgtctgtgtagcttgtaattgtgacccagatggc
tctgtaaatggtggtatgtgcgatggtcgcgacgactccactctgggcatgattgctggt
cagtgccgctgtaaggagaatgtggaaggccctcgctgtgacagatgcaagtctggcttc
tttggcctgagtgctaatgacccacaaggctgccagccatgtaggtgtgaccccagggga
acagtctctggcagtccccagtgtgaccctatccgaggagactgcttctgcaagcacatg
gtcactggacgcacctgcaaccagtgcctgccagagcactgggccttaagccatgatgcc
agtggctgcagagcatgcgaatgtgatgtaggtggagctacagataaccagtgctcaatg
gaatcaggccagtgtcgctgccgcaatcacttgatgggccgccagtgcaaccaggtagac
actgggtatttcttcatggccctggactactatatctatgaggctgaacttgccaaactt
ggtcagggctgcactgttgaggaaagggagtggcagtcaggtcgaccagtttcttggact
ggcactgggtttgcacgagttcctgaaggaagcactctggagtttttcatcaacaacatt
ccttattccatggagtatgatgttcttatccgttatgagcctcagatgccacaagactgg
gaggaggtgcgtgtaaaagttattaggcctggttcaattcccaccagcagcccatgtgga
aacaccatccctgcagatgatctactgactgtctccctgccctctggatccaggttcatg
gttctgccctggtctgtgtgtttggagagaggagtgagctatacactccgtctggagttt
atcagctatgcagacaaaaatagcattcctggctttagcaatgccaacatcttgatagat
tctattgccctgctccctcggtacaattccctggacatgtttgtagtgggtgaccctgcc
tctatcctccggaagcaaatttatgagcgttaccgctgccatgagagtgctaagagtgtg
tcccgcccagccatgagcgaagtgtgtgccaaacttatctttagcatgtcagccatcatt
aacgacggagcactgccttgccagtgtgacccccagggttcactcagctctcagtgtgat
gttcgtggaggtcagtgtccctgtaggcctaatgtaattggccggcgctgtgataggtgt
gctccaggaagctatggctttggacctgctggatgcaaagcatgtgaatgtagtaaggag
ggctctcgcagtcagttctgtgatcagcacacaggacagtgttcatgcctgccaggagca
ttcagccagcgatgtgacagctgccaggctggacactggggctttcccaactgcaggcca
tgtcagtgtaacggacacacagaggaatgccaccaaagaactggtgtctgtctcaactgc
aggggccacacggctggggaccagtgtgaaaagtgtgctaatggatactatggaaatcca
gtgttaggttcaggaagcagatgtcagccttgcccttgtccagatggacctgagagtgga
cgtcactttgctgcctcctgttaccaagacaaccatagcagacaggtggtctgcaactgt
aaacaggggtacacaggaattgttaagcgctcaggagggacagtcctcaagcgtgcgcgc
tgtgaggaatgtgcccctggttactatggtaatccctctcaacctggtggccgctgccag
ccatgtcgctgtagtaacaacatcgacctatcagatcctgagtcatgtgacaggcggact
ggggagtgtctcaaatgtctctacaacactgagggacctgagtgtgcagtgtgcaagagc
ggctactatggggatgcttctcgtcgcaactgcaggaagtgcacgtgcaacttcctgggt
acagagcgcagtcagtgtctatctcgagatgactgtctgtgtcagcgtgccaaaggacag
tgccagtgtctgcctcatgtcattggactcacctgtgatcactgtgcaccaaactattgg
aacctggccagtggccatgggtgtgaaccctgcaactgtgaccccaacaatgcctacaca
tcagcctgcaacgagttcacaggtcagtgtcagtgtcgtgatggctttggtggaaagact
tgcagggactgccaggagaacttctggggtgatcccagaatcctctgcagagcttgtgac
tgtgactctcggggcattgagacctcccagtgtgaccgtttgacaggtcactgcacttgc
cggcagggtgtatcgggtgtccgttgtgaccagtgtgcccgtggcttctcaggcattttt
ccagcttgccagccttgccaccagtgttttggagactgggatcgcattgtccaagattta
gcagctaggactaaggccctcgtagcccgggctcaggagatccagaccacaggcctgact
ggagcttatgagaagcattttagggagctggaagagaagctggcacaggcacagagcatt
gtcaatgcccgtaacgccactgctgaagctgtgaccaacctaatgggcatgatagagtac
ctcaggtctcgcattggtgagacaacagacaccctgacccagctggagggagacctaact
gcagtgcaggacagcaactatgaggccagcaatgacctgagctcactggagagagaggcc
aaagaactcaacctcagctctgagaggctcaacagccagcttgacatcctcaaaaattcc
aactttttgggggcctacgatagtatccgtgcctcttacaacaagtcacgtgacgcagag
cgacgcaccaaccagtccactactgacattccaagtactgtcagccaatcagcagacacc
cgtaaaaagacagagcgactaatggcagtgaataaagatgacttcaaccgtaagaatgct
gcaaacaagcgagccctcactgatctgaatacaaaagtccagaatttggatataaagaaa
atcaatgagaaggtatgtggagctccaggtgatgtcccatgttcagagagcccttgcggt
ggcgttgattgtcgtgatgatgagcgcagacactgtggagggctgaactgtaatggagct
gctgcagtggctgacaatgccatggagagatccaaacatgcagaaaaagagctcattaaa
gccatgggagaagtggaggacctcttcaagcaggtagcagatgctaaaacaaaggctcag
gaggccaaggataaagcccaggctgctctgatgaaagccagcgataccaagaacaaagtg
gaacgatctaacaacgacttgcgtgaccttatcaaacagattcgtgccttccttatgcaa
gagggagctgacccagacagcattgaggcagtggcaaatcaggttcttgagctgtccatt
ccagcctcaccccagcaaatcagacacctagctgatgagataaaagatcgtgtcagaagt
ctgtccaatgtcgatgctattcttgaccggacccaggatgatgtgcgcaaagcagaacaa
ctgcttacaaaagccagaaatgccaagaataaagcagacagagtgaagaacacagcagac
agtgtgaaacaggcactcgatgatgctcgtaaagcccaggcagctgctgagaaggctata
cagagagcaaaggatgacattggaacgactgagaaccgattggctcagattcagtctgag
acgtcagctagtgagaaggacctgaatgatgccatgaacaagctggggcatctgggacag
cagatagaagccttaaaggccaaacgggccaacaatagcatggttgcagctcgagctaag
gacactgccaccacggcacaaaacaaggctaatgaagcaaaacaggatctagatggtgaa
ctttcagataaataccgcagtgttcaagatctagttggcaggaaagcgagtgcagtgcag
gatgccaagaacaaagcagagcgactaagagatgaagcaaagcagctgcttaaggatgcc
caagacaaactgcatagactggcagaacttgagaaagactatgaggagaatcagaagacg
ttgcaggccaaagccaggcagcttgatggcctagaggacaaaatgaagatgattctggat
gccatcaacaagcaaatccagatctacaatacatgccagtaa
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integrated database retrieval system
