Pangasianodon hypophthalmus (striped catfish): 113530813
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Entry
113530813 CDS
T05759
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113530813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113530813
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
L1 family
113530813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
BiPBP_C
Syndecan
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
113530813
NCBI-ProteinID:
XP_026776949
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MRTERLWEILAAFIFLLQIWKQVSAVEIPPDVRQPPMIIKQSVQDHIVEPTDPIIVECEA
TGNPPPVFTWTRNGVYLNVARDPQVTMKRRSGTLEIFFWGRPEDYEGMYQCTATNEFGSA
LSSHIHLRVSKARTWLKEYLEPVSVFVGLPLILPCNPPVGPPKPQTYWMNSSMVPIRQDR
RVSMAENGDLYFSSVIADDALTNYVCTARFPNSNIIQQKPPLILQVHTARMAAQTAPKFL
KPRGTASTQIAMLGEELILECFASGVPAPTIKWTKDWESLSMDGMKLENFNKTLHIKKIS
LDDGGDYICTATNRMGSVDHIITVKVKSTPFWVEKPESLILSRDDSGQIVCKADGIPRPQ
IRWLVNGEPIEDAPKSPGRQVSGDTLIFRAVVPDSTAVFQCNASNQYGYILANAFLAVMD
MRPRMLGIRDDLVKVIEGTQTLLHCPYFGSPKPVLRWSKGGVGLLEGSRYSILSNGTLEI
KLTKLQDQGTYLCIASNVIGRDEMEIQLEVKEPTKIIRAPHNVIVIKGSLAQFDCKIQSD
PTLEVKVTWLKDNKFLIFGRRITKNEDSMSIADVYRRDEGIYTCRVKTELEEISASAKLT
VMDRPDPPTDLEVSDPSERSVRLTWVPGLSNHSPIKEYLVQYTEDLLADYWLVPSGWKNL
TRYPGHLNSVVLQLTPFVEYQFRVVAINVIGPSKPSKPSVHYETGGAVPDAIPRNIQGRG
TGVFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSHIIYETDTFT
PYEIKVQAVNYFGLGPESPVIIGYSGEDRPTAAPDDLHVSDVESTKLTVHWHPVPQASIM
GEIKEYTVYYWRESSRLPHHSVTTRIKSKSFKANGPRLSGTLTGLIPYSNYKMYIVVANN
RFEGPPSNRIEFQTLEGVPSVPRSFRIMHRHYDTIYLDWEEPAEPNGILTGYILKYQTLN
VSAGERMLVEEIPPNTTQFSLRRFDRYTRYKFSLAAQTQVGVGEAYTEESPHFTTEEYTR
EQVDIVTQGWFIGLMCAIALLVLIMLTVFFIKKTRGGKYPVRDKRDFTLDSVDEKDEGSF
EYRSLERITRVPTLPYTRREEESRQGRSQGHMQKKTNSDDSLMEYTEGDEIEFNEDGSFI
GEYTGTTKRDRDSFA
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgaaagattgtgggagattctggctgcattcatattcctgttgcagatatgg
aaacaggtatctgcggtggaaatcccaccggatgtgagacagcctcctatgataattaag
caaagcgtccaagatcatatagtggagccaacagaccctatcatagtggagtgtgaggcc
actggaaaccctcctccagtcttcacttggacacgtaatggagtgtacctgaatgttgca
cgtgaccctcaggtcaccatgaagaggcgctctggcactctggagatatttttttggggt
cgtccggaagattacgagggcatgtaccaatgcacagctactaatgagtttggttcagct
ctatccagtcacattcatttgcgcgtctccaaggctcgtacatggctgaaggaatatttg
gagccagtgtctgtgtttgtgggtcttcctttgattctgccctgtaatcctcctgtgggc
ccacccaaacctcagacctactggatgaacagctctatggtaccaattcgtcaggatcgt
agagtatcaatggcagagaatggagacttgtacttctccagcgtcatagctgatgatgca
ctaacaaactatgtgtgcacagctcgcttccccaactccaacatcatccagcagaaacct
ccactaattcttcaggtgcacacagcccgtatggcagctcagactgctcccaagttcttg
aagcccagaggaacagccagcactcaaatcgccatgctaggggaggagcttatcttggag
tgtttcgcttctggagttccagctcccaccatcaaatggactaaagattgggaaagcttg
tccatggatggcatgaagctggaaaacttcaataaaactctgcacattaagaaaatctct
ttggatgatgggggcgactacatctgcactgctaccaacaggatgggcagtgtggaccac
ataatcacagttaaagttaaatcaaccccattttgggtcgagaaaccagagagtcttatt
ctctctcgagacgatagtgggcagatagtgtgtaaagctgatggaattcccagaccccag
atacggtggctagttaatggagaacctattgaggatgctcctaagagtcctggcagacaa
gtatctggcgatactttgatatttcgtgccgtggtgcctgatagcacagctgtgttccag
tgtaatgcctccaaccaatatggctacatcctggccaatgccttccttgcagtaatggat
atgaggccacgaatgctgggcattagagatgacttggttaaagtaattgaagggactcaa
acacttctgcactgcccatattttggctcaccaaaacctgtcctgcgctggtctaaaggt
ggagtgggtttattagagggaagtcgatatagcattctttctaatggaacactggaaata
aagctcaccaaactccaggaccaggggacatatctctgcattgctagcaatgtcattggt
cgagacgagatggagatacaactggaggtcaaagaacccactaaaatcatccgtgcccca
cataatgttattgtgataaaagggagcttggcacaatttgactgtaagatccagtctgac
ccaaccttggaggtaaaggtcacctggctcaaggacaacaaattcctgatctttggaaga
agaatcacaaagaatgaggactctatgagcattgctgatgtgtatagaagagatgagggt
atttatacctgcagagttaagaccgaactggaggaaatcagtgcatcagccaaactcact
gtgatggatcgtcctgacccacctactgacttggaggtgtcagatccatcagaacgaagt
gttagacttacctgggtgccaggactgagcaaccacagccctatcaaagagtatctggtg
cagtacacagaagatctgcttgctgattattggctagtgccgagtggctggaagaacctg
acccgttaccctggccacctgaactctgttgtgctgcagctgacgccgtttgttgagtac
cagttccgggttgtggctatcaatgtgatcggccccagcaaacccagcaagccatctgtg
cattacgagactggtggagctgtgccagatgccataccaagaaacatccaaggaaggggg
actggagtgttccgaaataacatggagatcagctgggagccgttggagtatagagagtgg
aatgggccaaagcttggctacatggtgtggtggagaagaagagattccagagaggagtgg
aaaaattacaccacctattggtggtgcagtcacattatctatgagacggacaccttcaca
ccctatgagattaaagtgcaggctgtcaattactttggccttggaccagaatctcctgtg
atcattggatactcaggagaggatcggcccactgctgctccagatgacctgcatgtctca
gatgtggagagcacgaagctgacagtccactggcaccctgttccccaagccagcatcatg
ggggagattaaagagtacacggtgtattactggcgagagagcagccgcctgccccatcac
agcgtcaccacaaggatcaaatccaagagctttaaagcaaatggacctcggctttctggc
accctaactggcctcattccctacagcaactacaaaatgtacatagtagtggccaataac
cgctttgagggtccaccgagcaacaggattgagttccaaacccttgagggagtgccatca
gtacccagatccttcaggatcatgcataggcattatgacaccatctacctggactgggag
gaacctgcagaacccaacggcatcctgaccgggtacatcctcaaataccagacattgaac
gtgtcagcaggagagcggatgctggtggaggaaatcccccccaacaccacacaattctca
ttgcgccgctttgaccgctacactcgctacaagttcagtctggctgcccagacgcaggtg
ggagtgggagaggcatacacagaggagtcgccccatttcacaacagaggaatatacccgg
gaacaagtggacatagtcacgcagggatggttcatcgggttgatgtgtgccattgcactt
ttggttctcatcatgctcacagtcttcttcattaaaaaaacacgtggagggaagtaccca
gtgagagacaagcgggattttacacttgactctgtggatgagaaggatgaggggtctttt
gaatacaggtctcttgaaaggataacgcgtgtacccaccctaccctacaccaggcgagag
gaggagagccgccagggtcggagtcagggacacatgcagaagaagacaaacagtgatgac
agcctgatggaatatactgaaggtgatgagatcgagttcaacgaagatggctctttcatt
ggtgaatataccggcaccactaagagagacagagactcttttgcatag
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integrated database retrieval system
