Pangasianodon hypophthalmus (striped catfish): 113530825
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Entry
113530825 CDS
T05759
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113530825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113530825
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113530825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
IQ
ATP-synt_B
GPHH
FraC
Phage_T7_Capsid
Motif
Other DBs
NCBI-GeneID:
113530825
NCBI-ProteinID:
XP_026776968
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MAAPLLAPPGPDSFRLFTLETLANIEKRVAEEKAKPPPKPDSSYRDDDDENKPKPNSDLE
AGKNLPFIYGDISPGMVATPLEDIDPFYMNKKTFIVINKGKTIFRFSATPSLYIISPFNI
VRRIAIKILIHSLFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESAIKIIAR
GFCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINITELYQANGSHTF
DWDEYIMNETNFYKLPGSLDALLCGNGSDAGRCPEGYTCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAAQKEEEFKAMLEQLKKQQEEAQANAMATSAGTVSEDAAEDDGVENLSCSSSEMSK
LSSKSAKERRNRKKKWKQKEQDREKGDSEKFVKSESDDGSRKRFRFPDNRLGRRSSIMNQ
SLLSIPGSPFLSRHNSKSSIFSFKGRCRDAGSENEFADDEHSTVEECDQRRGSLFSPYRR
SSYSGYHGKHNSTVDCNGVVSLIGPGPGGRLLPEVIIDKAASDDSPTTDIEIKKKLSGSL
MVSMDQLNASFGHKERANSVMSVTNTLVEELEESQRKCPPCWYKFANNFLIWECCPMWLK
IKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFEHVLSVGNLVFTGIFTAEMV
AKLVAMDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYRDCVCKIAESCELPRWHMND
FFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADNLAATDDDGEMNNLQISVNRIKRGIAWVKAKIRQLVRVILRRQVVDEAKPLDELYDKK
LNCIANHTDLNRELDYQKDANGTTSGIGSSVGRYMIDEDHMSFIHNPNLTVCVPIAAGES
DFENLNTEDFSSESEAEGSKDGLDDSSSSEGSTIDIKPEVEEAVVVEAVEEYVDPEPCWT
EACVARYKCCDVSITEGWGKSWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYI
EQRKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLIAN
ALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFS
IMGVNLFAGKYYYCFNETSEEYFKPHEVNNRTQCIELINSNYTEVRWKNVKINFDNVGAG
YLALLQVATFKGWMDIMYAAVDSRKVEDQPLYEDNIYMYLYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDFVTQQ
VFDISIMILICLNMVTMMVETDDQSQETENILYWVNFIFIVVFTSEFVLKLFALRHYYFT
NGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLF
ALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKRESGIDDMYNFETFGNSMIILFMIT
TSAGWDGLLAPILNYPPDCDPEKENPGTSVKGNCGNPSVGIFFFVMYIIVSFLIVVNMYI
AIILENFSVATEESADPLCEDDFESFYEIWEKFDPTASQFITFAKLSDFADTLEHPLRVP
KPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFIAANPSKVS
FEPITTTLRRKQEHMSASVIQRAYRAHLVRRGFICKRLLSSGKLENGGTNQEKKEDTPST
ASLPSYDSVTKPEKEKMDDSESKGKNGKNQKDIKESKC
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccgccaggacctgacagcttcagattgtttaccttggag
actctggctaatattgaaaagcgtgttgctgaggagaaagccaagcctccacccaagcca
gacagcagttatcgtgatgatgatgatgaaaacaagcccaaacccaacagtgacctggaa
gcgggcaaaaacctgcccttcatctatggtgacatctctcctggaatggtggcgacacca
ctggaggacatcgaccctttctacatgaataagaaaacatttatagtgataaacaaaggg
aaaacaatattccgctttagtgccacaccttccttgtacattataagtccttttaatatt
gttaggcgaatagctattaaaattttgatacattcgttattcagcatgatcatcatgtgt
acgattttgaccaactgtgtattcatgacgtttagtaatcctccagaatggtccaaacaa
gtagagtacacattcacaggaatttatacgttcgaatcggccatcaaaatcatcgcccgc
ggcttctgtatagacgacttcacattcctgagagatccatggaactggctggacttcatg
gtcatctcaatggcatatataacagaatttgtggacctggggaatgtatctgcgctgaga
acgttcagagttctccgagcattgaaaactatctctgtcattccaggtctaaagaccatc
gttggcgccttgatccagtcagtgaagaagctgtcggatgtgatgatcctcaccgtgttc
tgtctcagcgtgttcgccctcatcggtctgcagctcttcatggggaacctgcggcacaag
tgtgtcatctggcccatcaacatcactgagttataccaggccaacggcagccacaccttc
gactgggacgagtacatcatgaatgaaaccaatttctacaaactccctggcagtctggat
gctctgttatgtgggaacggctccgatgctggtcgttgtcctgagggctacacatgtatg
aaggctggacgcaatccaaactacggctacaccagctttgacagctttggctgggcattt
cttgctcttttccgcctcatgacgcaggacttctgggagaacttgtacatgctgactcta
agggcagcagggaagacctacatgatctttttcgtgctggtgatcttcgtgggctccttc
tacctggtcaatctgatcctggctgtggtggccatggcctatgaagagcagaaccaggcc
accatggaagaagcagcacagaaagaggaggaattcaaagccatgctggaacagcttaag
aaacagcaagaggaagcccaggcaaacgccatggccacatcagcaggtacggtgtcagag
gatgcagcggaggatgatggagtggagaacttgtcgtgtagctcctccgagatgtccaaa
ctcagttccaagagcgccaaggagcgcaggaaccgcaagaagaagtggaagcagaaggag
caggacagggaaaaaggggacagtgagaagtttgtcaaatctgaatcggatgatggcagc
aggaagaggttccgtttccctgacaaccgcttaggccgaaggtcctccatcatgaaccag
tctctcctcagcatccctggctcgcccttcttatcacgccacaacagcaagagcagcatc
ttcagcttcaaaggccgctgccgggacgctggctctgagaacgagtttgcagatgacgag
cacagcactgtggaggagtgcgatcagagacgtggctcgctgtttagcccgtaccgccgc
agcagctacagtggctaccatggcaaacacaacagcacggtggactgcaatggggttgtg
tctctaatcgggcctggtccgggaggacgcctactgcctgaggtgataatagataaggca
gcttctgacgacagcccaaccactgacattgagatcaagaagaaactctcaggctcttta
atggtttctatggaccaactcaatgcttcttttgggcacaaagagcgagcgaacagcgtc
atgagcgtcaccaatacattagtagaggaactggaggaatcgcagagaaagtgtccacca
tgctggtacaagtttgccaacaacttccttatctgggaatgctgccccatgtggctgaag
atcaaagagattgttaacctgatcgtgatggaccccttcgtagacttggctatcactata
tgcatcgtcctcaacactctgttcatggccatggagcactacccgatgacgccacacttt
gaacacgtgttgtctgtgggcaacctggtattcactggaattttcactgcggaaatggtg
gccaagctggttgcaatggacccgtactactacttccaggagggctggaacatctttgat
ggttttattgtgagcctgagcttgatggagcttggattagctgatgtggagggcctatct
gtgctcagatcattccgattgctgcgagtgtttaagctggctaagtcgtggcccactttg
aacatgctgataaagatcattgggaactcagtgggtgctctggggaacctgactctggtc
ctggccatcattgtcttcatctttgctgtggtgggcatgcagctgtttgggaagaactac
agggactgtgtgtgtaagattgctgaaagctgcgagctcccccgttggcacatgaatgac
ttcttccactcgtttctgatcgtgttccgtgtgctgtgtggagagtggatcgagacgatg
tgggactgcatggaagtggccggtcaagccatgtgtctcatcgtgtttatgatggtcatg
gttatcggaaacttagtggtgctgaatctgttccttgccttgctgctgagctcattcagt
gcagacaacctggcggccacggatgatgatggagagatgaacaacctgcagatctctgtt
aaccgtatcaagagaggcatagcctgggtaaaggccaaaatccgtcagttagtgcgtgtt
atcctccggaggcaggtggtggatgaggccaagcctctggacgagctgtatgacaagaaa
ctgaactgcatcgccaaccacacggacctcaaccgtgagttggattaccagaaagacgcc
aacggcaccaccagtggcatcggcagcagtgtgggcaggtacatgatcgacgaggaccac
atgtccttcatccacaaccccaatctgaccgtatgtgtgcccatcgcggcaggggagtcc
gactttgaaaatctgaacacggaggacttcagcagtgagtcagaggctgagggcagcaaa
gatgggctggatgacagcagctcgtcagaaggcagcactatagacattaagccagaggtc
gaggaggctgtggtggtggaggcagtagaggagtatgtcgacccagagccatgctggact
gaagcttgtgttgcgcgctacaagtgctgtgacgtgtccatcactgagggctggggaaag
agctggtggtacctccgcaagacctgctatctcattgtggagcacaactggtttgaaacg
ctcatcatcttcatgattctgctgagtagtggagccttggcttttgaagatgtatacatc
gagcagaggaagactattcggatcatcttggagtacgctgaccgagtgttcacctacatc
ttcatcctggagatgctgctgaaatgggtggcctacggtttcgtgaagtatttcaccaac
gcctggtgctggctggacttcttcatcgtggatgtgtctatagtcagccttatagctaat
gcgctgggctactccgatctagggcccattaaatcactcaggacactcagggccctgaga
ccactcagagcattgtcccgttttgaagggatgagggttgtagtcaacgccttggtgggt
gccatcccttccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagt
atcatgggcgtcaacctgtttgcggggaagtactactactgcttcaatgaaacttctgag
gaatactttaaaccacacgaggtgaacaacaggacgcagtgcatcgaactcatcaattcg
aactacactgaagtgcgctggaagaatgtcaagatcaattttgacaacgtgggtgccggc
tatctagctctgctccaagtggctactttcaaaggttggatggacattatgtatgcagct
gttgattcacgaaaggtggaagaccagcccttgtatgaggacaacatctatatgtacctt
tacttcgtcatctttattatttttggctcgtttttcactctcaacctgtttattggtgtc
atcatcgacaacttcaaccagcaaaagaaaaagtttggaggtcaggatattttcatgaca
gaagaacagaagaaatactacaatgcaatgaagaaacttggttcaaagaaaccacaaaaa
cccatacctagacctcagaacaagatccagggaatggtgtttgactttgtgacgcagcag
gtctttgacatctctatcatgattctcatctgtctgaacatggtaaccatgatggtggaa
acagatgatcagtcacaggagacagaaaatatactgtactgggtgaacttcatcttcatt
gtggtcttcacctctgaatttgtcctcaagctctttgccctgcgtcattactatttcacc
aatggttggaatatctttgactgtgttgtggtcattctttctatagtcggtatgttccta
gcagacttgattgagaagtactttgtgtcaccaacactgttcagggttattcgcttggct
cgaattggtcgtatcttgcgtctgatcaaaggcgccaaaggcatccggactttactgttt
gccttgatgatgtcactgccagctctgttcaacatcggcttgctgctcttcctggtcatg
ttcatcttctccatcttcggcatgtctaactttgcctatgtcaaacgggaatctggaatt
gatgacatgtacaattttgagacctttggaaacagcatgatcattctgtttatgatcacc
acctcagcaggctgggatggcctattggctcccatcctcaactaccctccagactgtgat
cctgagaaggagaacccaggtacctcggtaaagggcaactgtggcaatccttccgtgggc
attttcttctttgtcatgtacatcattgtgtcttttctgatcgtggtaaatatgtacatc
gccattatcctggaaaactttagcgtggcgacagaagagagtgctgatccgctgtgcgaa
gatgactttgagtctttctatgagatctgggagaagtttgatcctacagcttcgcagttt
atcacatttgcaaagctcagtgactttgctgacactctcgagcaccccctaagggtgcct
aagcccaacacgatagaactcattgccatggacctgcccatggtgagtggagaccgaatt
cactgcctggacatcctgtttgcctttaccaagcgtgttctgggtgacagtggtgacctg
gacatgatgcggcagcagatggaggagcgtttcattgccgccaatccctccaaggtatct
tttgagcccattaccaccacattgcggcgcaagcaggagcacatgtctgcttcggtcatc
cagcgtgcttaccgcgcccaccttgtacgccgaggcttcatttgcaagcgtcttctaagc
agtggcaagctggagaatggagggaccaaccaggagaagaaggaggacacaccctccact
gcctcactgccctcctacgacagcgtgaccaaaccagagaaagaaaaaatggatgacagc
gaaagcaaaggcaagaatggcaaaaaccaaaaagacatcaaggaatcaaagtgttag
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integrated database retrieval system
