Pangasianodon hypophthalmus (striped catfish): 113530905
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Entry
113530905 CDS
T05759
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113530905
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phyp00537
]
113530905
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
Contactins
113530905
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phyp00537
]
Others
113530905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Pur_ac_phosph_N
V-set_CD47
Tissue_fac
Fn3_nematode
Motif
Other DBs
NCBI-GeneID:
113530905
NCBI-ProteinID:
XP_026777099
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MKLLWKPFLLLSVMECLTDCLDYKSFHGPKWRMEPSDLMVPVGLPEEEATLTCDAKGFPA
PQYRWSLNGTLIDLRADNRRRLSGGNLVIRNLDLAEDAGIYQCTAFNSLGAILSRRASLQ
FAYLNFKTQMRSAVSVREGQGVVLLCGTPIYAGELHFAWVFNEYPYFVQQDNRRFVSQET
GNLYIAKVEPSDVGNYTCVVVNRITKVKMLSSPTPLVLRTDGVMGEYEPKIEVHFPDMVP
AAKGSIVILECFALGNPVPEITWRRANGVPFPNKVKMKNSNVVLEIPSFQQEDAGGYECV
AENKMGRNTVKGRLSFHAKPQWVQTMHDSALSIDESLFWECKASGKPKPSYSWLKNGELL
NTEDRIHIENGALTVVSVNLSDAGMYQCVAENKHGIIYFSAELVVLASPPDFSRSQVRAL
LKAKTGSTVTMECRPQAYPPPITSWRKGSEQLQSTDRISLLPDGTLKIINVTKTDVGSYT
CLARNQFGMASTTRRLLVTDPTRITQGPVDMEIIVGESIVLPCQIACDASLDVSFSWAFN
GQLLNKLDPHYEHVGGGVAGDLMIRNIQLKHAGKYVCVIDTDVESLSAAAILIVKGPPGA
PDSVTVEEITDSTAQLSWRPGQDNGSPILSYIIQTKTAFTVGWQAVNTVPEVIDGNTLTA
TVVDLNAWVEYEFRVLARNSVGVGEPSPASLKTRTEDAVPDTAPANVGGGGGSKSELVIT
WEPVPEELQNGDGFGYIIALRLLGELTWTHVVTSAPGRYVYRNESIAPFSPFTVKVGAYN
VKGQGPFSPVTTVFSAEEEPSRMPEGVWARSISDTEFEVSWQTLSDSPERVLGYEVMYWE
DDTKPETMGKVRVSANQCTVNISGLKGYTQYFLTVSSFNTAGTGPRTPTINITTKKSPPG
QPPVNVEWNLIGSKLTVHWDPVVTMEMESEVTGYKVSYTRNRHTEINTVTTNVTSVELIL
PADDNYIIQICALSDSGDGMPTEPINIHKLSMSVRGSRAWQPTAIPLSLLFIIALTAMRP
TL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaagttattatggaaaccgtttttgctgctatcagtcatggagtgtcttacagattgt
ttggattataaatcattccatgggccaaaatggcggatggagcccagtgatttaatggtg
cctgttggtttaccggaagaagaggccacactcacctgtgatgccaaaggcttccctgct
cctcagtacaggtggtcactgaacggcacactgattgatctgagggctgataatcggcgg
cgtctctctggggggaatctggtgattaggaatctggaccttgcagaggacgcgggaatc
taccagtgcactgcttttaactcactaggagccattctcagcaggagagcgagccttcag
tttgcatacttgaattttaaaactcaaatgagaagtgctgtgtcagtgcgggagggccaa
ggagtagttttactatgtggtacacccatatatgcaggagagctgcattttgcctgggtg
ttcaacgagtacccgtactttgtccagcaagacaacagacgttttgtctctcaagagact
gggaacctttacatcgctaaagtagagccttcggacgtagggaactacacatgcgtggtg
gtaaatcgcattacaaaggtcaaaatgctgagctctcccactccgctggtcctgaggaca
gatggtgtgatgggtgaatatgagcctaaaatagaagttcatttccctgacatggttcca
gctgccaagggctccattgtgatactggaatgctttgctttggggaacccagtgcctgaa
ataacatggagaagggctaatggagttccctttcccaacaaagtgaagatgaagaactct
aatgtcgttctggagattcccagtttccaacaagaggatgcgggtggttacgagtgtgtg
gcagagaacaagatgggcaggaacactgtgaaaggacgactctccttccatgctaagcct
cagtgggtgcagaccatgcacgacagtgccttatccattgatgaaagtctgttttgggaa
tgtaaagccagtggaaaacccaagccctcatacagctggctaaagaatggagaactactt
aacacagaggacaggattcacatagagaatggagctctaactgtagtatcagtcaaccta
tctgacgctggcatgtatcagtgtgtagcggaaaacaaacatggaatcatttatttcagc
gctgaactggtggtacttgcttcacccccggatttctccagatcccaagtgcgagcacta
cttaaagctaaaactggcagcactgtgactatggagtgtaggccccaggcttatccccct
cccatcacatcctggaggaaaggcagtgaacagctccagagcacagacaggataagtctt
ctccctgatggaacactaaaaatcataaatgtgacaaagacagatgtgggcagctataca
tgcctggctagaaaccaatttgggatggcaagcaccaccagaagactattggtcacagat
ccgacacggatcactcagggcccagtggatatggagatcatagtgggtgagagtatcgtg
ctgccatgccaaatcgcgtgtgatgcctctctggatgtgtccttttcctgggcctttaac
ggccagctcctcaacaaactcgacccgcactatgagcacgttggtgggggggtggctgga
gatctaatgatacgcaatattcaactgaagcatgctgggaagtatgtctgcgtcatcgac
actgatgtagaaagtttgtctgccgctgccattttgattgtaaaaggtccccctggagct
ccggacagtgtaacagtagaggagatcacagacagcacagcgcagctctcctggaggcct
ggccaagacaatggcagtcccatcctcagctacatcatccagaccaaaacggctttcact
gtgggatggcaggcagtgaacacagtacccgaggtgatagatgggaacactttgactgct
acagtggtggacctgaacgcgtgggtggagtatgagttccgagtcctggctagaaacagc
gttggcgtaggggaaccaagcccagcctcactcaagaccagaaccgaggatgcagttcct
gatacagcaccagctaatgttggcggtgggggaggctccaagtctgaattggtaataaca
tgggagcctgtgcctgaggagctgcagaatggagatggttttggttacatcattgctttg
cggctgctcggtgagctaacatggacccatgtcgtgacgtcagcacccggacgctatgtt
taccgcaatgagagcattgcaccattttctcctttcactgtgaaagtgggtgcatacaac
gtgaaaggccagggacccttcagccctgtcaccacagtgttctcagcagaggaagagcct
agcagaatgccagagggcgtgtgggctcggagtatttctgacactgaatttgaagtgagc
tggcagacactctctgactctcctgaaagagttttgggttatgaggtcatgtactgggaa
gacgacactaagccagagacaatggggaaagtgcgagtgtctgcaaatcagtgcacagtg
aacataagtggcctgaaggggtacactcaatatttcctcacagtgagctccttcaacaca
gcaggaactgggccacgcacacctaccattaacatcaccaccaaaaagtctccaccagga
cagccgccagtgaatgtggagtggaatctgattggctcaaagctgactgtccactgggac
cctgtagtcaccatggagatggagtcagaggtcactgggtataaggtttcttacacaagg
aacagacatactgagatcaacacagtgaccactaacgttacttctgtggagctcatcctc
cctgccgacgataattacatcattcagatttgtgctctgagcgacagcggagatggcatg
cccactgagcccatcaacattcacaaactgagtatgagtgtacggggttcaagagcgtgg
caacctaccgccatccccctgtccttgctttttatcatcgcattaactgccatgaggcca
actttgtga
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integrated database retrieval system
