Pangasianodon hypophthalmus (striped catfish): 113530949
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Entry
113530949 CDS
T05759
Name
(RefSeq) mimecan-like
KO
K08126
osteoglycin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phyp00535
]
113530949
Proteoglycans [BR:
phyp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
113530949
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
113530949
NCBI-ProteinID:
XP_026777170
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MDSRMLFFSFLLVPWMLCSTAQNDQMEHQNSGLLIVDFDKWQTDDSFFMEVKKKKEKVIA
APDYGSVDNTSDEGSAVEKKEADLPTCLLCVCLSGSVYCEEVNPEMISVPPLPKETTYLY
ARFNKITRITKKDFADFGTLKRIDLTGNLISEIEDAAFSKLDQLEELTLAENRLIKLPML
PPKLISLNANHNRLKTKGIRSTVLKKLKKLAFLYLGDNELEAIPPLPESLRVVHLHNNNI
TTLTDDTFCKGNDTHYIRYNMQEVRLDGNPVVLAQHPNSFICLKSLPIGLYI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggactcgaggatgttatttttctcctttctgcttgtaccatggatgttatgttcaaca
gcacaaaatgatcaaatggaacatcaaaacagtggtttactgatagtggattttgacaaa
tggcagacagatgatagctttttcatggaggtgaagaaaaaaaaggaaaaggtcattgca
gccccagactatggaagtgttgataatacaagtgacgaaggttcagcagtagagaaaaaa
gaagcagatcttcccacttgcttgctgtgtgtatgtttatctggatctgtgtattgtgaa
gaggtcaacccagaaatgatatcagtaccacctttgccaaaggaaaccacatacctttat
gcacgcttcaacaaaatcaccagaatcactaagaaggactttgctgattttggcacactg
aaaagaatcgatctgactggcaatctcatttcggaaatcgaggatgcagccttctccaaa
ctggaccaactagaagaactaacactcgctgagaacagactaatcaaactaccaatgctg
cccccaaagcttatctcactcaatgccaatcacaatcgactcaaaacaaaaggcatcaga
tcaactgttttaaagaaactcaaaaaactggcattcctgtaccttggtgacaatgaattg
gaggccattccaccacttcctgagagtctgcgtgttgtgcatctgcataataataacata
accaccctgacggatgacactttctgcaagggcaacgacacacactacatcaggtacaac
atgcaggaggtgcgactggatggaaacccggtggttcttgctcagcatccgaacagcttc
atctgtctgaaatctcttccaattggcctctacatttaa
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