Pangasianodon hypophthalmus (striped catfish): 113531141
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Entry
113531141 CDS
T05759
Name
(RefSeq) keratin, type I cytoskeletal 50 kDa-like
KO
K07604
type I keratin, acidic
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113531141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113531141
04147 Exosome [BR:
phyp04147
]
113531141
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
113531141
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
113531141
Exosomal proteins of other body fluids (saliva and urine)
113531141
Exosomal proteins of colorectal cancer cells
113531141
Exosomal proteins of melanoma cells
113531141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
CCDC39
TPR_MLP1_2
RNA_binding
ADIP
FKBP15
BAT
ApoLp-III
CENP-F_leu_zip
GAS
DUF1664
AIF-1
ATG16
Baculo_PEP_C
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
113531141
NCBI-ProteinID:
XP_026777475
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MTSFSSFTSSGGSFSGGSFRGPGIGGSSRLSTISSGGSHRLMVGRAPSMYGGSGGSGVRI
STVSSSIRGGGGAAGLGFGSGAGFGFGAGGGAGGGAGFGLGGGFGGEDLGIVTANEKATM
QNLNDRLASYLDKVRTLEKANADLELKIRQFMENKASPAARDYSAYEATIKDLQDKIQDA
ARDNGSIYLSIDNAKLAADDFRTKYENELAMRQSVEADIAGLRRLLDELTLTRSDLEMQI
EGLKDELIFLKKNHEEELEAMRNTMSGSVNVEVEAAPGEDLNRVLDEIREQYEAVAAKNR
RELEGWFQAKIDNLNKEVTASSANLETSKSEVTEVRRTLQGLEIELQSQLSMKASLEGAL
ADTEGRYSMKLTGLQAQVTGLEQQLMELRADIERQAQDYKLLLDIKTRLEMEIAEYRRLL
DGEADSLKTNISKNLMVKTIVEEMVDGKVVSSTTS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcttcagcagttttacctcctcaggtggttccttcagcgggggctcctttcgg
ggtcccggtataggtggatcatctcggctttccacgataagcagtggtggtagccaccgc
ttgatggttggacgtgcccccagtatgtatggtggttctggaggatctggtgtgcgcatc
tccactgtctccagctccatacgtggtggtggaggtgctgcaggcctaggttttggtagt
ggagcaggctttggctttggagctggtggaggagctggtggaggagccgggtttggcttg
ggtgggggttttggtggtgaagatctgggcattgtgacagccaatgagaaggccaccatg
cagaacctgaatgaccgtctggcatcctacctggacaaggtacgcaccctggagaaggcc
aatgctgacttggaactgaagatcagacagtttatggaaaacaaggcctcccctgctgcc
agagactactctgcttatgaggccaccataaaggacctgcaggataagatacaggatgct
gccagagataatggaagcatctacctgagcattgataatgctaaactggcagcagatgac
ttcagaaccaagtatgagaatgagttggccatgcgtcagtcagtggaggcagacattgct
gggcttaggagactcctggatgagctgacactgacaaggtcagacctggagatgcagatt
gaaggccttaaggatgagttgatcttcctcaagaaaaaccacgaggaggaactggaagca
atgcgtaatacaatgtcaggtagtgtgaacgtggaagtggaggcagcacctggggaagac
ctgaaccgtgtcctggatgagattcgtgagcagtatgaagctgtggctgccaagaaccgg
cgtgaactagagggctggttccaggccaagatcgataatctgaacaaggaggtgaccgcc
agctcagcgaatcttgaaacgtccaagtcagaggtcactgaagtcagacgcactttacaa
ggcctggagattgagctacaatcccaactcagcatgaaagcatctctggagggcgctcta
gcagatacagaggggcgctactccatgaaactaactggactgcaagctcaggtaacagga
ttggagcagcagctgatggagctcagagctgatatagagaggcaagctcaggactacaag
cttctgctggacatcaagacccggctggagatggagattgctgagtacaggaggctgctg
gatggagaggctgacagtctcaaaacaaacatcagtaaaaatttgatggtgaagaccatt
gtggaagagatggtagatgggaaagtggtgtcctccacaactagttaa
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