KEGG   Pangasianodon hypophthalmus (striped catfish): 113531174
Entry
113531174         CDS       T05759                                 
Symbol
wdr44
Name
(RefSeq) WD repeat-containing protein 44
  KO
K20241  WD repeat-containing protein 44
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113531174 (wdr44)
Membrane trafficking [BR:phyp04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    113531174 (wdr44)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_SPT8 DAO_C
Other DBs
NCBI-GeneID: 113531174
NCBI-ProteinID: XP_026777523
LinkDB
Position
Unknown
AA seq 883 aa
MASDTSDAEEFYDAAEDVNLSPSPNVSPAKFVLPQSQGLENPVQEEAATSEPRHDDSLQI
IDSIIEESQKGGGVEEDLLSGEEKSSASSLPEPPVAPDLPAAPAEPDVEQEVRSQDTPET
QEVAADGAQASQEETSPPPPPPDITRALGTSQSAEANSITNTPKTADILDQVPLGDKPES
DSSGPSKPPRQFTVEPDIVASTKKAPPTRPPPPSGAPPPRPPPPSRPSLPASKKSQETIR
PTRLEVSAEGAEEPCGLVSPNSSVRGLAKELQHSLDLASATSGDKVVTAQESDERQPSPS
GGETPGPQRPRSNSGRELTDEEILASVMIKNLDTGEEIPLNQAEEKLPAGINPLTLHIMR
RTKEYITNDAAQSDDDDKSQPPLTDSDGGKLKQKTTQLKKFLGKSVKRAKHLAEEYGERA
VNKVKSVRDEVFHSEQDEPSSSDDEGMPYTRPVKFKAAHGFKGPFDFDQIRVVQDLSGEH
MGAVWTMKFSHCGRLLATAGQDNVVRIWVLKNAYDYFNNMRIKYNTEGRVSPSPSQESLC
SSKSDTEGGLAGAAVEDSDLEDRNVPFRQLPFCKYKGHTADLLDLSWSKNYFLLSSSMDK
TVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEV
DGQTRLITAANFCQNGKYAVIGTYDGRCIFYDTERLKYHTQIHVRSTRGRNRVGRKITGI
EPLPGENKILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDYSFIVSGSEDK
YVYIWSTYHDLSKFTSVRRDRNDFWEGIKAHNAVVTSAIFAPHPDLIVPQEPGAEKPDTE
CKSNVTDESEPIPSGALKTDHTEVLLSADFTGAIKVFVNVKKY
NT seq 2652 nt   +upstreamnt  +downstreamnt
atggcgtcggatacgagtgatgccgaggaattttacgacgcagcggaggatgtcaacttg
tctccgtcgccgaatgtgtcacctgcaaagttcgtccttccccaatctcagggtctagag
aacccagtacaggaagaagctgctacgtcagagcctcgccatgatgactctctccagatc
atcgacagtattatagaggagagtcagaaagggggcggagtcgaggaggatctgttgagc
ggtgaggagaaaagctccgcctcctcacttccggaacctccagtagccccggatctccct
gcggctcctgccgaacccgatgtcgaacaggaagtgaggtcgcaggacacaccagaaaca
caggaagtggctgctgatggagctcaggcatctcaggaagaaacttctcctcctcctcct
cctccggacatcacgcgcgctctggggacgtctcaatccgccgaagctaactccatcaca
aacacacccaaaacggcggacatcttggatcaggtgccgctcggagacaaaccggagtca
gactcctccggtccatcgaagcctcccaggcagttcacggtagagccggatatcgtagct
agcaccaagaaagctcctcccacaagaccaccacctcccagcggagctccgcctcccagg
ccaccgccgccgtctcgcccctctctccccgccagtaaaaaatctcaggaaaccattcgg
cccacgagactggaggtgtctgcagagggagcggaggagccgtgcggattggtcagtccc
aactccagcgtcagaggactcgctaaagagctgcagcactctctggacctggctagcgcc
accagcggggataaagtggtgactgcgcaggaatctgatgagcgacagcccagtccgagt
ggtggtgaaactcctggaccacagagaccacgctctaactcaggcagagagctcactgat
gaggagatcttggcgagcgtgatgattaagaacctggacacgggtgaggagatcccactg
aaccaggccgaggagaagctcccagctggaatcaacccgctcacactgcacatcatgagg
aggaccaaggagtacatcacgaacgacgccgctcagtcagacgacgacgataagagtcag
cctccgctgaccgactcggatggagggaaactcaaacagaaaaccacccagctgaagaag
ttcctggggaagtcggtgaagcgggcgaagcacctggcggaggagtacggcgagcgcgcg
gtgaataaggtgaagagcgtgcgggacgaggtgttccactcggagcaggacgagccgtcc
tccagcgatgacgagggcatgccgtacacacggcccgtcaaattcaaagcagcgcacggc
ttcaagggtccgttcgacttcgaccaaatccgagtggtgcaggacctcagcggagagcac
atgggagcggtctggacgatgaagttctctcactgcggccggctcctggctacagccggt
caggataacgtggttcgcatctgggtcctaaaaaacgcctatgactactttaacaacatg
aggatcaaatacaacacagaaggtcgtgtctcaccttcgccctctcaagagagtctgtgc
tcctccaagtctgacactgaaggagggctggcaggagcagcagtggaggactcggacctc
gaagacagaaacgttcccttcagacagcttcccttctgcaagtataaaggccacacagca
gaccttctcgatctctcctggtcaaagaactacttcctgttgtcgtcgtccatggataag
acggtgcgcttgtggcacatatcgaggcgagagtgtctctgctgtttccagcatatcgac
ttcgtcacagcgatcgccttccatcccagagacgaccggtattttctgagcggctctctg
gacggtaagctgcgtctgtggaatatcccggataagaaggtggctctgtggaacgaggtg
gacggccagacgcgcctcatcactgcagccaacttctgccagaacggcaaatacgccgtc
atcggcacatacgacggacgctgcattttctacgacacagagcgccttaagtaccatacg
cagatccacgtgcgctccaccagggggaggaaccgcgtgggccgcaaaattactggcatc
gagcctctgcctggagagaataagatcctggtgacatcaaacgactctcgaattcgtctg
tatgacctgagagacctgtcgctgtccatgaagtacaaaggctacgtgaacagcagcagt
cagatcaaagctagcttcagtcatgattactcgttcatcgtgagcggctcagaggataaa
tatgtgtacatctggagcacgtaccatgacctgagcaaattcacctctgtacggcgggac
cgcaatgacttctgggaaggaattaaagcccataacgcagtcgtgacgtcggccatcttt
gcgccacacccggatctgatcgtgcctcaggagccgggggcggagaaacctgataccgag
tgcaagagcaatgtcacagacgaatcagagcccatcccttcaggagctttaaaaacagat
cacacggaagttctcctctccgccgacttcacaggcgccatcaaagtgttcgtcaacgtg
aaaaaatactga

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