Pangasianodon hypophthalmus (striped catfish): 113531303
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Entry
113531303 CDS
T05759
Name
(RefSeq) nuclear receptor corepressor 1-like isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113531303
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113531303
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113531303
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113531303
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
113531303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
113531303
NCBI-ProteinID:
XP_026777734
LinkDB
All DBs
Position
Unknown
AA seq
2086 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYTFSPARHPPEFTVPEYRNAHLQDQQQRRRPSLL
SEFHPGTERPPERRHGYEQQFHTVTAQSEHDAMDAKRPRIEGTTEAHLARAPPSSIVLPL
PHPVQDGLRTPGEIKKETQFSVKLEASSPGGGIQAMGEEQDASPSKLSKEELIQSMDRVD
REIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVSPPPVEHKHRSIVQIIYDENRKKAEE
AHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQ
RYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGL
SATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPMK
VFKSRQFMNVWTEHEKEIFKEKFVQHPKNFGLIATYLERKCVSDCVLYYYLTKKSQNYKT
LVRRNYGSRRRRNQQITRPSQEDKSDDKNEEDKSEKSDKKEEDDKKDEEEKDEKEDSKDI
SKDKEKCEGEDEEGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASTATEEAPAPPPPP
PPPPPEPAVPESVPPPKPDSAPKPARELTKLAPVTNMDSQARGAVEAGETSRWTEEEMEV
AKKGLVEHGRNWSAIAKMVGTKSEAQCKNFYFNYKRRHNLDDLLPQPKQATRRLRDRDAC
QSDSVATASADDDEENPDDSEGADNTSDTESAPSPSQSDTSKPSESQPQALDQEATAPKV
PNADTKAQEPFNELQVKLEKSPEGAAVDESMVKDEAHLHPKSEPQDTETAGGDRGEVQVK
TEPELREKEKQSEQHSDNDSSATCSADEDVEAEPDRQRMFSLEKPSILGGSGSVVVSSGK
QAPLSMQQLQQRAATIPPMVAGPFGTAGVPVGAPLSGLTMFQHQIKAVHESAHMEDSQRQ
DAGEVDRRPRFITRSPTVLDRDGKPFAYMSYDIKLMEQEAHAAGRPGSPYRLSPREPSKA
SPQPEPNNPARYSVPPVLQPAPNQVVQNLPDGMRVTFTRHRPPNIPSPPPLIPTSKPSDK
PTFIQGGSILQGTPGTYLPSHTHAMYGPEGAKSAGGSISLGLPRQQDPAKPVSYIKQEEC
SPRGQNAQAEGLLSRAQYEGVVRGGPMPTIQDLARGSTGKGPEGLPLRAGSITHGTPALP
QSGIPADLLKSKLTAEDLSSPEKGRGEPLPKGHVIYEGKSGHILSYDAIKNPREGTRSPR
TGHELKRTYEMMEGARGHPGREAAPFEGLISRALPRDGTHPDTKERPILTGSIMQGTPRT
SADAFDEVKYGKQIKRESPPIRSFEGGITKGKPYEGVNTIKEMGRSIHEIPRKEVPDSRK
TPVLEGSITQGIPLKYESSGASQSAIKHNVKSLLTSPGKLEDSKVQERVRHTSVVSSTSV
LRSTHQEASKAQLSPGMYEDANALRTSSYTSGSISRGSPLLRAQEGGITAGKPVSHERKS
TLTPTQRDSVPAKSPVSGGEPLASHSPFDPHQVYRAHLAPHLDPSLFHHSAYMFQRQPSP
TGYPNTYQLYTMENTRQTILNDYITSQQMQVIPRAEVARGLSPREQQIAIPYPAGARGII
DLAQMPPTILLPHPGGTGSPNLDRITYLPGPQPPFPPRVFNPASISPGHPAHLAASVERE
RERERERERERERDREHREREKEREKERERERERERERERERERMAAANEYIRGAPEQPG
RPGSRDFLRSPSPSMRSQEGVVQQRPSIFQGTKSVITPLMQMPSAAAAAQTSSRYNTAAD
ALAALVDAAASAPQMDVAKVKEGKHEGISARDDEVSPSRAMSLPAGKAPLPVYSDGGGGA
TSGKDKPPPTKSRIEEELRTLGKTTITAASFIDVIITRQIASEKDSRERGSQSSDSSGSL
SSNRYDGQSSGAIEVISPASSPAQREDKNERSFSSDKSTQPATGTVRGFDINRYRQPVES
GPTAAPPPPTQTHRVMTLADHISHIITQDFAKNQDPPPSSSSSSSSSSISSTFQNSGAVG
SSARSKVPNRYSPENPVNPAHHQKPPSRVSPENASEKSRSRYCIVP
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctcgggctttccccccagtcaggggagcttcagcagcgagcagagccgctat
ccgccccactcggtacagtacaccttcagtcctgcacgccatccgccggagttcacagtt
ccagagtaccgtaatgctcacctgcaggaccagcagcagcgtcgccgaccctcattactg
tcagaattccaccctggaaccgagaggcctccggagcgccgacacggctatgagcagcag
ttccacacagtcacggcccagtcggagcacgacgccatggatgccaagcgtcctcgcatt
gagggcaccaccgaagcccacctggcccgtgcaccgccctccagcatcgtcctgccgcta
ccacaccccgtacaggacggcctgagaaccccaggagagatcaagaaggagactcagttc
agtgtgaagctggaggcctcgtccccaggaggagggattcaggccatgggggaggagcag
gacgcgtctccttccaagctctccaaagaagagctaatccagagcatggaccgtgtggac
cgcgagattgccaaggttgagcaacagatttttaaactcaagaagaagcagcaacaactg
gaggaggaagcagcaaagccagtggagccggaaaagccagtgtctcctccccccgtggag
cacaaacaccgcagcatcgtgcagatcatctacgacgagaaccggaaaaaagcagaggag
gcccataagatctttgaaggacttggccctaaagtagagctgcccctgtataaccagccg
tcagatactaaagtgtaccacgacaacattaagacaaatcaagtgatgaggaagaagctg
attctgtttttcaagaggaggaaccacgcacgcaaacagagggaacagaaaatctgccag
cgctacgaccagctgatggaggcgtgggagaagaaggtggagcggatggagaacaaccca
cggcgtaaggccaaggagagtcgcacgcgcgagtactacgagcgccaattccccgagatc
cgcaagcagcgcgagcagcaggagcgcttccaaagggtgggacagagagggacggggctg
tctgccaccatagcaaggagcgagcatgagatctcagaaatcatagacggcctctcggaa
caagagaacaacgagaagcagatgaggcagctatcagtcatccctcccatgatgtatgac
tcggagcagaggcgcgtgaagttcatcaacatgaacggacttatggatgaccccatgaag
gtctttaagtctcgccagttcatgaacgtctggactgagcacgagaaggagatttttaag
gagaagtttgtgcagcacccaaagaactttggcctcattgccacttatcttgagcgaaag
tgtgtctcagattgtgtactgtattactacttgaccaagaagagccagaactataagaca
ctggtccgacgaaactatggcagccgacgacggaggaaccagcagataacacggccctca
caagaagacaagtccgacgacaagaacgaggaggataagtcggagaaatcagacaagaaa
gaggaagacgataagaaggacgaggaggagaaagatgaaaaagaggactcaaaggacatt
agcaaagacaaagagaagtgtgagggagaggacgaggaggggaaggagcagagcacgcca
cgaggtcgcaagacagctaacagccagggacggcgtaagggccgaatcaccacacgctcc
atggccaacgaagctgctagtactgccacagaggaagcaccagcaccacccccgccacca
ccaccaccaccacctgagcctgctgtaccggagtctgtccctcctcccaaaccagattct
gctccgaagccagcacgcgaactcactaagcttgctcctgtgaccaacatggacagccaa
gcacgaggagctgtagaggctggagagacgtctcgctggacagaggaggagatggaggtc
gccaaaaaagggctggtagagcatggcaggaactggtcggccattgctaaaatggtgggc
accaagagtgaggcacagtgcaagaacttctacttcaactacaagaggcggcacaacctg
gacgacctgctgcctcagcccaaacaggcaaccagacgcttgcgtgatcgagatgcatgt
cagagcgacagtgtggccacggcttcggctgacgatgatgaggagaacccagacgacagt
gaaggtgcagataacacttcagacacagagagcgcgccatctccttctcagtctgacacg
tccaagccctccgagtcacagcctcaagccctggatcaggaagctactgcccccaaagtc
cctaatgcagataccaaagctcaggagcccttcaacgagctgcaggtaaagctggagaaa
agtccagaaggagcagcggtggacgaatccatggttaaggacgaggcccacctgcaccct
aagagcgaacctcaggacacagaaacagcgggaggagaccggggagaggtgcaagtaaag
accgagccggaattgagggagaaagagaagcagagcgagcaacattcagacaacgactcg
agtgccacctgcagcgctgatgaagatgtcgaggcagagccagacagacagaggatgttt
tctctggagaagccatcgattctcggaggctctgggtcagtggtggtctcctcaggcaag
caggctccgctcagtatgcagcagctccagcagcgtgctgccaccatccctcccatggtt
gcaggtccatttgggacggccggtgttcctgtaggagctcctctgagcggcttaaccatg
ttccagcaccagatcaaagctgtacacgaatctgcgcacatggaggacagccagagacaa
gatgctggagaggtggaccgtaggccgcgcttcatcactcgcagccccactgtcctcgac
cgagatggtaagccgtttgcctacatgtcatacgatataaagctgatggagcaggaggct
cacgctgcaggaagaccaggttcaccctacagactgtctccccgagagccaagcaaagca
tcgccccaacccgagcccaacaaccctgcccgctacagcgtccctccagtcctgcagccc
gctcctaaccaggtggtccagaaccttccagatggaatgcgtgtgacattcactcgccac
aggccccccaacattccgtcccctcctccgctaatccctacgtccaaaccctcggataag
cccaccttcatccagggaggatccattttacagggaacgccaggcacatatctgccctca
cacactcacgccatgtatgggccagagggagccaagagcgctggaggatccatctctctc
ggcttgccaagacagcaggaccctgccaaacctgtgtcctatataaagcaggaggaatgt
tcaccgcgtgggcaaaatgctcaggctgaagggctgctctccagggcacagtatgaagga
gtagtccgaggagggccaatgcctaccatccaggacctggcaagagggtctactggaaaa
ggccctgagggacttcctttaagagcaggatccatcacacatggcaccccagctcttcct
cagtccggcataccggcagatctgctgaagagcaagctgactgctgaggacctgagcagc
ccagagaagggccgaggcgagccactgcctaaaggccacgtcatctatgagggcaagagt
ggccacatcctgtcgtatgacgccattaagaaccccagagaaggtactagaagtcccagg
acaggacatgagttgaagcgcacatacgagatgatggagggagccagaggacatcctgga
cgggaggctgcaccttttgaaggtttgattagcagggcgctgcctagagatggcacacac
cctgacaccaaggagaggcccatactcacgggatccatcatgcaagggacaccccgaacc
tccgctgatgcttttgacgaggttaagtatggtaagcagatcaagagggaaagtccacca
attcgctcctttgaagggggaatcactaaaggcaagccctatgagggtgtgaacaccatt
aaagagatgggacgctccattcacgagatcccccgcaaagaagtaccggacagccgcaag
acccctgtcttggaaggatccattacgcaaggcatccctctgaagtatgagagcagcggc
gccagccagtcggccatcaagcacaatgttaagtcacttctcaccagcccaggcaagctg
gaggactccaaagtacaagagcgcgtgcgacacacatccgtcgtcagctccacatcagtg
ctgcgctccacacaccaggaggccagcaaggctcagctcagcccagggatgtacgaggat
gcgaatgccctcaggacctccagctacaccagcggctccatctccagaggatcacccctg
ctgcgagcacaagaaggaggcataactgcaggaaagcctgtgtcccacgagagaaagagc
acgctgaccccaacccagagagacagtgtcccagccaagtctcctgtatccggaggagag
ccgctggcctctcacagcccctttgacccccatcaggtgtaccgagcccacctggcccct
catttggaccccagccttttccaccactcagcttacatgttccaacggcagccatcccct
accggataccccaacacctaccaactgtacaccatggagaacacgcgccagacaatcttg
aatgattacattacctcgcagcaaatgcaggtcatcccacgggctgaggtcgccagaggc
ctgtcacccagggaacagcagatcgccatcccataccctgctggagccagaggtataatt
gatctagcccagatgcctcccaccatcctgttgcctcaccctggggggacaggttcccct
aacttggaccgcatcacgtacctccctggacctcagcccccttttcctcctagggttttc
aacccagcctccatatctccaggacaccctgcacatctcgcagccagcgtggagagggag
agagagagggaaagagaacgtgaaagagagagggagagggatcgtgaacacagagaacgg
gagaaagagagggagaaggagcgagagagggagagagaacgggaacgagaaagggagagg
gagcgtgagcgcatggcagccgctaacgaatacatccgtggagctccagagcagcctggc
aggcctggtagccgtgatttcctgcgttccccgtccccttcaatgaggtcccaggagggt
gtagtccagcagaggcccagcatcttccagggcacaaagagtgtcatcacgcctctgatg
cagatgccctctgcagcagccgcagcacagacttcctctcgctacaacacagccgcggat
gcattggctgcactggtggatgccgctgcctctgcccctcagatggatgtagcaaaggtc
aaagagggtaaacatgagggcatcagtgcccgtgacgacgaggtgagcccctcacgagcc
atgtctcttcctgctgggaaagcaccacttcctgtatattcagacggaggaggaggggca
acaagtggcaaagataaaccacctcccaccaagtctcgcatagaggaagagctgcgcaca
ctcggcaagaccaccatcaccgcggccagcttcatcgacgtcatcatcactcgtcagatt
gcatcagaaaaagactcgcgcgagcggggctcacagagctcagactcctcaggaagtttg
tcatcgaaccgttatgatggacagagcagtggagccatcgaggtgatcagcccggcaagt
tccccagctcagagagaggacaagaatgaacggtctttctcctcagacaagagcactcag
ccagctacaggtacggttagaggatttgatattaatcgctacaggcagccggtggaatcg
ggacccacagcagccccacctccacctacacaaactcaccgtgttatgaccctggctgac
cacatctcgcatatcataacccaggactttgccaagaatcaggaccctcctccttcctcc
agctcttcttcctcctcttcctccatatcctctacattccaaaactctggagcagtaggc
agcagtgctcggtccaaagtgcctaaccgctacagtccagagaaccctgtcaaccccgcc
caccatcagaaaccacccagccgagtgtcccctgagaacgcttcagagaaatccagatcc
aggtactgcatagtgccatag
DBGET
integrated database retrieval system
