Pangasianodon hypophthalmus (striped catfish): 113531316
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Entry
113531316 CDS
T05759
Symbol
arhgef28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113531316 (arhgef28)
Membrane trafficking [BR:
phyp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113531316 (arhgef28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
C1_2
PH_13
PHD
PHDvar_NSD
Phage_zn_bind_3
Ank_2
DUF7588
Motif
Other DBs
NCBI-GeneID:
113531316
NCBI-ProteinID:
XP_026777767
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MELNRDEVPVYGQVEVCAVLQDPQSVQEKAEYYVLLKGSHIHHVTTAQRKKESHLLSFII
PGHNVAERVSVQLYCWEESSSYNQPTPMSEELLLEYKWDAIQEVADLLISDPDNLTSSTH
VDIQRKLCLGERIQPGQSSSDTNEQHGTSRLDEESLGLGQRLYKLKKESGNHNLEENPEC
WEPDPGEGCRLEPCGAVDVKITQAVSNMSSLLEWNNQKTQQSQALRHMETPLHIAVRLGL
YHLTLFYLHQAGGQEMATLPNEEGHTPTELAQSRGHAATISVLSNLSAWREESPVWMSQI
WADESHLLRVCPLTSSFVLTVKHQIHFNAQRSIRLYREKHGYLESHVQEVVLTEVEEKSK
QNQTDDTSEGLTSRTNVEDCVLLDSVFEEQLVLSLDEDDENPTTYNSEKSCSPPSSSSPF
QLQSTDITTARITAMLNRTGKNDDQHRKYNTAAVTNDSSAPDTPPAVKVEGMKEQRPFAR
PFSPSLTHFSPTSSAGLVLDRFLRSSCHNEHDNHSAGSPPESYEISPNLVALEMDSEEED
DDLLMKKPLPQISAENKDTGDKQDSFNISSDLSCTRSHSASSDSNHASQKDSADQGVRLR
SYSYSSPKISLLPPRSSRDTPRPPADLSHDGVLTSNSSGSRSLLQALSLSKSLSLLNPVK
QRALSLTEQPQEKRIEEEGWDKYIIPSKTEPEKYKVSRTFSFIKSRMYSTRSKKGKAKEK
EVKEKQGNGHQFAAGPVLGTSVCEVCDKPVTGKETLHCANCAVSIHKGCKDSAAQCLKKV
QDKYAVSMMKARAATLPQNFVLRESIPSSQISTSASLPVMTPRDRRDTSTLPCPLSRSVP
LVPEWLAESPEGDNDSSSWRSHGQSEELLQTMESSTSTDSSLVEDTVDAPLQNSFGMDAL
YLEAESWSLAVEPQFCQKQEKRTIKRQDVIYELMHTELHHLQTLTIMAEVFRRGMREEVG
LDAEAIGRIFPCLDELLVLHRDFLSAMTERRNNSTQPDNDKNYLIHHVGDILLQQFSQEN
AENMKRVYGEFCSRHNEAVSFFKELQQQNKRFQLFIKQQSSNSLVKRREIPECILLVTQR
ITKYPVLLERLLQYTEEGTQEHADISGALSLVRELISAVDMRVSEREQSQWLSDVLGRME
SKSLARLKSGAAFRKHDMTNGRTLLHHGPLLWKTATGRLKDVLALLLTDLLVFLQEKDQK
YIFAAVDQKCPVISLQKLIVREVANEERGMFLISASSSGPEMYEVHAASKDERNAWMRLI
REAVVICHEKEEDTASESEEERRAAEAKSQKIQKLQESLCGHDQLICSSLEEKLHMYAEL
AAMVGHRDISPEPKLLVHPNTEELPNAAVLLNAALKEAESLKEALSFHCNSSSCSDLLLA
SEEQNTSDSTTHLEAPPPAPSPPPMPAEEEPQAVDAVRSEEEELSGEDSLELQLRNQSSA
TDNHNIHRKVCQSVQSLTQLLYSLQAMVTIQDSRYEVRRLLLLLLSNSSHQRISQGSLQE
QERQREAERRRQELARAARERQRWARECQAQQLRYEERESELAQREQQCHEEAQRLQRQR
EELEEQQQEYQQSLERLREGQRSVEREREKLEMQQKMMERWRHERQSSLPVTSIKVEGHQ
GSGDETKNFHHGHHGGLDEDGSIFVNEAAFLAPTMNNRHLNHYQHQYQHNTRIHPGFVNS
PSAQNSLNSLLALSNHTHPTISMQDELWTEDVGPAIHTTRTAGAVGPGIYQGDALLVPQA
FVSMETENQDPDGEEKIVYL
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaacagagatgaggtccctgtttatggtcaggtggaagtgtgtgcagtgctg
caggatcctcagtctgttcaggaaaaggctgagtactatgtgttattaaaaggctcgcat
atccaccatgtcaccacagctcagaggaagaaagagagccatttactgagcttcatcata
cctggtcacaatgtggcagaaagggtctcagtgcagttgtactgctgggaagagagcagc
agctacaatcaaccaaccccgatgtcagaggaactcttattggagtacaaatgggacgct
atacaggaagtggctgatctgctcatatctgaccctgataaccttacttccagcacacat
gtggacatccagaggaaattatgtctaggagagcgtattcagccagggcagagcagttca
gatacgaatgaacagcatgggacctcgagactagatgaagaaagtttaggacttggccaa
agactatataaactaaaaaaagaatcagggaaccacaatctagaagagaatcctgaatgc
tgggagcctgatcctggtgaaggatgcagactggagccatgcggtgcagttgatgtgaaa
atcacacaggcggtttcaaacatgtcctctcttctagagtggaacaaccaaaagacacag
caatcacaagctctccgccacatggagacacctctgcacatagctgtgcgtttgggtctg
tatcacctcaccctcttctaccttcatcaggctggaggtcaggagatggcaacactgccc
aatgaggaaggacacactcctactgaactggcccaaagtagaggccatgcagcaaccatc
agtgtcttatctaacctttcggcttggagagaggagagcccagtgtggatgtcacagatc
tgggctgatgaatcacaccttctcagagtgtgcccgctaaccagttccttcgtcctgaca
gtcaaacaccaaattcattttaatgcacagaggagcatccggctctatagggaaaaacat
ggatatctagaaagccatgtgcaggaggttgtactcactgaggtggaagagaaaagcaaa
cagaaccagacagatgacacaagtgaaggtcttaccagccggacaaacgtagaggattgt
gttctgctggacagtgtttttgaagaacagcttgtcctttctctggatgaagacgacgag
aatcccaccacatataattcagagaagtcttgctctcctccaagttccagctctccattc
cagcttcagtctacagacatcactactgccagaatcacagccatgctcaaccgcaccgga
aagaatgatgaccagcacaggaagtacaacactgccgcagtgacaaatgacagctctgcc
cctgacacaccacctgccgtcaaagtcgaagggatgaaagagcaacgcccgttcgctcgt
cctttctctccatccctcactcatttctcccccacttcttcagcaggactagtcttggac
cggtttcttcgtagcagctgccacaatgaacacgacaaccacagtgcaggttcacctcca
gaatcatatgaaattagcccaaatctggtggccttggaaatggacagtgaagaggaggat
gatgacttacttatgaagaagcccctccctcagatatcagctgaaaataaggacaccgga
gataaacaggacagctttaatatatcctcagacctcagctgcactcgctctcactccgct
tcctctgactcgaaccatgcctcccaaaaggactctgcagatcagggagtacgtctccgt
tcatattcttattcatcacccaaaatcagcctgctgcccccacgttccagccgagacact
ccccgtcctcctgctgacctcagccacgatggcgtcctcaccagcaacagcagtggcagc
agatctctcctacaggctctgtctctgtctaaatctctgtctctgctcaatcctgttaaa
cagcgtgcactcagcttaaccgagcagccacaagagaaaagaatcgaagaagaaggatgg
gataaatacattattccttccaagactgagcctgagaaatacaaagtcagccgcaccttc
agttttattaaaagccgaatgtacagtacacgcagcaagaagggaaaagcgaaggagaag
gaagtgaaagaaaaacagggcaacggacaccaatttgcagcaggtcctgttctggggact
tcagtttgtgaggtgtgtgacaaacctgttactgggaaggaaactctgcactgcgccaat
tgtgcggtgagcatccataagggttgtaaagattctgcagcacagtgcctcaagaaagtg
caggacaaatacgcagtttctatgatgaaggccagagcagccaccctccctcaaaacttt
gtattgcgcgaaagcatcccgtcttctcagatatccacttcagcctccctccctgtgatg
actccacgggacaggagagacacttccactctgccgtgtcctctatccaggagtgtcccc
ctagtcccagagtggcttgcagagagcccagagggagacaatgactcctcctcctggaga
tctcatggccagtcagaggagctcctacagaccatggagtcttccacttccactgactcc
tccctcgttgaagacacagtggacgctcctctacagaacagttttgggatggacgctctg
tatttggaggcagagtcgtggagtctagcggtggagcctcagttctgccagaagcaggaa
aaacgcacaatcaagagacaggatgtcatctacgagctaatgcatacggagctacaccac
ctgcaaacgctgaccatcatggcggaggtgtttaggcgaggtatgcgggaggaggtgggc
ttggatgcggaggctattggtcggatattcccgtgcttggacgagctcctcgtcctgcac
cgagacttcctttctgccatgacggagcgccggaataactccacgcagcctgacaatgat
aagaactacctcattcaccatgtgggtgatatcctcctgcaacagttctctcaggagaat
gctgagaacatgaagcgggtctatggggagttctgcagccgccacaacgaagccgtcagc
ttcttcaaggagcttcagcagcagaacaaacgatttcaactctttattaaacaacagagc
agcaactcgctggtaaagaggcgagagatcccagaatgcattttgttagtgacgcagcga
attacaaagtatccagtgcttttagagaggcttctgcaatacacagaagagggtacgcag
gagcatgctgatatctctggtgctctgtctctggtgagagagttgatttcagcagtggat
atgcgagtgagcgagcgggagcagagtcaatggctgagcgatgtgctcggccgcatggaa
agcaagagcttagccagactgaagagcggcgctgcctttcgtaagcatgacatgaccaat
ggccgaacgctgcttcaccatggcccgttgctttggaagaccgccaccggtagactcaaa
gatgtgctggccctcctgctgactgatctgctggtattcctccaggagaaggaccaaaaa
tacatctttgctgctgttgaccagaaatgtccagtgatctccctgcaaaagttgatagtg
agggaggtggctaatgaggagagaggcatgttcttaatcagtgcctcctccagcggcccc
gagatgtatgaggtgcacgcagcatccaaagacgagcgcaacgcctggatgaggcttatc
cgagaagcagtggtgatttgccatgagaaggaggaggacactgcaagtgagtcagaagaa
gaacggcgagcagcagaagccaagagccagaaaattcagaagctacaagagtctctctgc
ggtcatgaccagctgatctgctccagcctggaggagaagctccacatgtatgctgagctt
gcagccatggtgggccacagagacatcagcccagaaccaaagctgctggtgcaccctaac
acagaagagctccctaatgctgctgttctgctcaacgctgcacttaaagaggcggagagt
ctaaaagaagcactgtcgtttcactgcaactcctcctcctgttcagatcttctgcttgca
tctgaggaacagaacacttccgactccaccactcatctcgaggcacctcctcctgctcca
tctcctcctccgatgcctgctgaagaagagccccaagcagtggatgctgtaaggagtgag
gaggaggagttgagtggagaagacagcctcgagctccagcttcgcaatcagagcagtgca
actgacaatcataatattcaccgtaaggtgtgtcagagcgtccagagtttgactcagttg
ctttacagtttgcaggccatggtcaccatccaggacagccgctatgaagtgcgtcgtctc
cttctcctcctcctctcaaactcctcccaccaacggatctcccagggttccctgcaggag
caggagcgccagcgggaggcagagcgtcggcggcaggagctggcacgggcggcccgggaa
cgccagcgatgggcacgcgagtgccaggcacagcagctgcgttatgaagagagggaaagc
gagctggcacagcgggagcaacagtgccatgaggaggcccagaggctgcagcgccaacgc
gaggagctggaagagcagcagcaggagtaccagcagagcctggagagactgcgggagggc
cagcggagtgtggagagagagagggagaagctggagatgcagcagaagatgatggagaga
tggaggcatgaacgccaatccagcctgcctgttacaagcatcaaggtggaaggtcatcaa
gggtcaggagatgaaacaaaaaacttccatcatggtcatcacggtggcttggatgaggat
gggtccatttttgtaaatgaagcagcttttctggctccgaccatgaacaatcggcatctt
aatcactaccagcatcagtatcagcataacactcgcatacatccaggcttcgtgaattcc
cccagtgcccagaacagtctgaattctctgctggctttgtccaatcatacacaccccaca
atcagcatgcaagatgagctatggactgaagatgttggtccagcaatccatactaccagg
acagcaggggcggtggggccagggatttatcaaggtgatgccctcttggtgccgcaggct
tttgtttccatggaaacggagaaccaagatcccgatggagaggagaaaatcgtgtatctc
taa
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integrated database retrieval system
