Pangasianodon hypophthalmus (striped catfish): 113531343
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Entry
113531343 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113531343 isoform X1
KO
K13886
coronin-1B/1C/6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113531343
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113531343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
113531343
NCBI-ProteinID:
XP_026777822
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MEMQETDSVKLMTDLTLSDFTDPPNMSECLISSRENDCALLETNGISSTSYRQSSNINRD
EGRRDNMNDTEKRKRDESLPITVLNLSENKDCSLGKGKEKESSFSADMGRINQRNYSGKH
SCSQQETSASFDLTNSDPEAITDLNSSDEVLVQLKIEEAFELKGSSTSQADLNQNSVLTD
HELIMLKHGKDTSTFMENYPMAISHGHLDELSDQLPVTLEPHIAKVQLFEGIRLCGKRDC
EIVNQTDVYSPSAELKIAPDRVPHQKSNNSPLQKLSINCSVESHFGTGEALKKRRLESNK
EVNDTNTDNVDGREIITASLIQEKDPSYFTAIITPPDQIHILSVPETTMISDSLVRDTPK
QKSAKSKGPPPPVPKKPKNPFCKDVAHAIDMPRPYSELLQKNIKKGRRESALHYVTEDFD
KSPPDLDMLSFCPGTLDSPSYMCVPGGFVPGFQPEVDVPAIYSDLDDMEDMDIWTKMVDI
LPEPGELDISQIRHILEKKAKIKGPPPPVPKKPLNPFVAIEKDNVLPINVSISKDTAGIL
TYESCDYKPYMHRTVHEEDPKTIFATDRDNLLVTYSNSDILDENIFLRFRPELIRQSDNV
HKKRTQQSSRDNVGNQGNKVLEITKTSDFKKPFSYQMERRLSPKKEMIRRVVRQSKFRHV
FGQAVKNDQCYDDIRVSRVTWDSAFCAVNPKFVAIIVEASGGGAFIVLPLQKTGRIDKAY
PTVCGHTGPVLDIDWCPHNDHVIASGSEDCTIMVWQIPENGLTAPLSEPVVVLEGHSKRV
GIVTWHPTVRNVLLSAGCDNVILIWNVGTGEALITLDDMHPDMIFSVCWNHNGSLICTTC
KDKKVRVIDPRKAKIIAEKDKAHEGSRPMRAIFLADGNIFTTGFSRMSERQLALWNSKNL
DEPISVHEMDTSNGVLLPFYDPDTNIVYLCGKGDSSIRYFEITDEAPYVHYLNTFSSKEP
QRGMGYMPKRGLDVNKCEIARFYKLHERKCEPIIMTVPRKWSPPGSSSIEPTVSQKAMDG
AICHRCTLTFEFSLYLFGSFLWIFVYHSHYPSVQSGVDFPLVATSREVAYSPMDLKLLNN
ICNCSHINIKLLGDGLIAFTFNILVYNFLYDLFRQLSLVHVQCGAHDGTNVTGKQSDYFS
LFK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcaagagaccgacagtgtaaaattaatgactgacttaactctgtctgatttc
acagatcctcccaacatgtcagaatgtctaatcagttcaagagagaatgactgtgcactt
cttgagaccaatggcatctcatcaacatcatacagacagagcagtaatataaacagggac
gaaggaagaagagacaatatgaatgacacggagaaaagaaagagggatgaatctctacct
ataacagttttgaatttgtcagagaacaaagactgcagtttaggcaaaggtaaggaaaaa
gaatcgtctttttctgcagatatgggtaggataaatcagaggaactactcaggcaaacat
agctgttcacaacaagagacatctgcatcatttgacttgacaaactctgaccctgaggct
attacagatctcaacagttcagatgaagttctcgtccagttaaaaattgaggaagccttt
gagctaaaagggtcaagcacatcccaagcagacttgaatcaaaacagtgttttgactgat
catgaattgatcatgctcaaacatggaaaagacacatcaacttttatggaaaactaccca
atggccatatcacatgggcatctagatgaattgagtgatcaattaccagttacactggaa
cctcacatagccaaagtgcaattgtttgaaggaataaggttgtgtgggaaaagagactgt
gaaatagttaatcaaacagatgtctattctccttcagcagagcttaagatagcccctgat
agagtcccacatcagaaaagcaataattcaccattacaaaagttatcaattaactgtagt
gtagagtcacattttggaacaggagaggcactcaagaaaagaagacttgagtcaaataaa
gaagtgaatgacaccaatacagataacgtcgatggaagagagataatcacagcttccttg
atacaagaaaaagacccttcctactttactgctatcattacacccccagaccaaattcac
atattatctgtccctgaaactactatgatctcagacagcttggtaagagataccccaaaa
caaaaatcagctaaaagtaaaggaccacctccacctgttccaaagaagccaaaaaatcct
ttttgtaaagatgttgcacatgcaatagacatgcctcggccatattctgaacttctacag
aaaaacatcaaaaagggaagaagagagtcagcattacactatgtcactgaggactttgac
aagtcccctccagatctagacatgttgtctttttgtccaggcacattagactcaccatcc
tacatgtgtgtaccaggaggttttgtccctggttttcagcctgaagtagatgttcctgca
atttattcggatttagatgacatggaagacatggacatttggacaaaaatggtggacatt
ctccctgaaccaggagagttggacatatctcagataagacacatattagaaaaaaaggca
aaaattaaaggccctccaccaccagtaccaaagaagccactaaatccatttgttgccatt
gagaaagataatgtcttgccaatcaatgtctcaatttcaaaagacacagcaggcatttta
acatatgaaagttgtgactacaaaccatatatgcacagaactgtgcatgaggaggaccca
aaaacaatctttgctacagacagagacaatcttctagttacatatagcaactcggatatc
ttggatgaaaatatttttttgagattcagaccagaactcattaggcaaagtgataatgta
cataagaaaaggacacagcaaagcagcagagataatgttggaaaccagggtaataaagta
ttggaaataaccaaaacctctgatttcaaaaagcctttctcatatcaaatggaaaggaga
ctgtcaccaaagaaagagatgatcaggcgtgtggttcggcagagcaaattccgccatgtt
tttggccaggcggtgaaaaatgatcagtgctatgatgacatcagggtgtcacgggtcacc
tgggacagcgccttctgtgctgtcaaccccaaatttgttgccatcattgtggaagccagc
gggggtggagcctttattgtcctccctcttcaaaagacaggtcgtatcgataaggcctac
ccaactgtctgcggacacacaggccccgtgctggacatcgactggtgccctcacaatgat
cacgtcattgccagcgggtctgaagattgtactataatggtatggcagatcccagagaac
ggactcactgctccactctcagagcccgttgtggtgttagagggacactccaagcgggtt
ggcatcgtgacatggcaccccacagtccgtaatgtcctcctcagtgctgggtgtgataat
gtgattttgatctggaacgtgggcactggcgaggccctcatcacactggatgacatgcac
ccagacatgatcttcagcgtgtgctggaaccacaatggcagcctcatctgcaccacctgc
aaggacaagaaagtgcgcgtcattgaccctcgcaaggccaagatcattgcagagaaggat
aaagctcatgagggttcacggcccatgagggccatctttctcgctgatggcaacatcttc
accactggctttagccgcatgagtgagagacaactggccttatggaactcgaaaaacttg
gatgagccaatctcagtacatgagatggacaccagcaatggagtgctacttcccttctat
gacccggacactaacattgtctacctgtgtggaaagggagacagcagcatccgctacttt
gagatcacagatgaagcaccgtacgttcattaccttaacaccttctccagcaaagaacca
cagaggggcatgggctacatgcccaaaaggggcctagacgttaataagtgcgagattgcc
aggttttataaacttcatgagaggaagtgtgagccaattatcatgactgtcccaagaaag
tggagtcctccagggtcttcttccattgagcccactgtctctcaaaaagcgatggatggt
gcaatctgccaccgatgtactttgaccttcgagttcagcttgtatctctttggaagtttt
ctttggatctttgtgtatcattcgcactatccttctgttcaatctggggtcgattttcct
cttgtggccacgtccagggaggttgcctacagtcctatggaccttaaacttcttaataat
atttgtaattgtagtcacattaacatcaagctgcttggagatggtcttatagcctttacc
tttaacatacttgtctataattttctttatgatctcttcagacaactctctctggtccat
gttcagtgtggtgcacatgatggtaccaatgtgactggtaagcagagtgactacttttct
ctgtttaaatag
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