Pangasianodon hypophthalmus (striped catfish): 113531351
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Entry
113531351 CDS
T05759
Symbol
wdr36
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113531351 (wdr36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113531351 (wdr36)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113531351 (wdr36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
Beta-prop_HPS5
Zn_Ribbon_Topo
Beta-prop_EDC4L
PD40
COS
Utp12
Motif
Other DBs
NCBI-GeneID:
113531351
NCBI-ProteinID:
XP_026777836
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MSVVGKKGSAIFSGFRALGLYSNHLPHVVRFHKKHREFYVVTAVGQCFHTYNVKKLGIVA
VSNALPEDIAYLAADRMLVYAAHGKVISAFAKNTEVVHTYEGHQADVHLLLPFGDHLISV
DKENAVIIWDVESEDVYLQISFDKSTFEVRAVMHPSTYLNKILFGSSQGSLQLWNVKSNK
LLFTFPGWGSAVTVLQQTPAVDVVGVGLASGQIIIHNIKFNETLMKFQQDWGPITALSFR
TDGHSVMAAGSPVGHIGLWDLEEKKLIGQMRDAHTTAIAGLSFLHGEPLLLTNGADNAIR
VWIFDVAGGEGRLLRFRMGHSAPPTKIKHYDQSGQHILSASQDGSLQSFSTVHERFNKSL
GHGSFTKKKAKKKGVMYNTAKLPPITTFASETARQGDWDGIVACHQGFVLTTTWNYRKGS
MGAHRLEPEHFNKNRALNIHATAVDVTSCGNFAVIALSSGHIDVYNMQSGLHRGQYGQDR
AHSGPVRGVSVDALNQLMVSAGADCLLKVWKFKSKELLNTHTLQAAPASTLLHRDRXEQA
TXDCRGRSLNLNRCTLFXSSAKYIDHLXVLDGPTFSPDGRWLITASMDCTIRTWDLPSGS
LVDCFLVDTAAVSVSFSPTGNVLASAHVDSLGIYLWSNTTLCSLVSLRPLPADYEPTVVM
LPGTCPSKDDEEEVLEPESSEMDEYVSPAQLDEQLVTLSLLPDSRWKNLLNLDIIKKRNK
PKEPPKVPKAAPFFIPTVPGLVPQFALPDTSSEEQSKVFNIGVLAQKSNFYLQLEEALDS
NLYEAAVRYLKELGPSAIDTELRGLAPDMGGHVSVMQSFLRMISSMLRLKQDFDLAQAYL
ALFLKLHLRLIAEQPVLMQETEIVLDLLEGTWTTIQTLLNKNMCLLSYIKSALL
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtggggaaaaagggaagcgcgatattctctggatttcgagcactcgggctt
tactctaaccatcttccacacgtggtccgtttccacaagaaacaccgggagttttatgtg
gtgacagctgttggccagtgtttccacacctacaatgtgaagaaacttggaattgtcgct
gtcagtaatgcccttcctgaagacatcgcctatctcgctgctgaccgaatgctcgtgtac
gctgcacatggcaaagtcatttcagcttttgcaaagaacactgaggttgttcacacttac
gaaggccaccaagctgatgtccacctactgcttccatttggagaccatttgatatccgtg
gacaaggaaaatgccgtcattatctgggatgtggagtcagaagatgtatacttgcagatt
tcatttgacaaatccacttttgaagttcgagctgttatgcacccgagcacctacctgaat
aaaatcctgtttggaagcagtcaagggagtcttcagttatggaacgtcaaatcaaacaaa
cttttgttcacttttcccggttggggatcggctgtgaccgttcttcagcagactccagca
gtggatgtggttggtgtgggcttggcttcaggacagatcatcatccacaacatcaaattt
aacgaaactctgatgaagtttcagcaagattggggtccaatcaccgccttgtcctttaga
acagatgggcattcagtgatggctgctgggagccctgttggacacataggattatgggat
ttggaagagaagaagctgattggtcagatgagagacgcacacaccacggcgatagctggc
ctcagcttcctgcacggtgaacccctgctcctcactaacggagctgataacgccatccgg
gtttggatttttgacgtagcaggaggcgaaggacgtctgctgagatttcggatgggtcac
agtgccccgcccaccaagatcaaacactacgaccagagcggacaacacatcctcagtgcc
agccaagatggctcattgcagtctttttctaccgttcatgaaaggttcaacaagagtctg
gggcatgggtcttttaccaaaaagaaagccaaaaagaagggggtgatgtacaacacggcg
aaacttccacccatcaccacttttgcatcagaaacagcacgtcagggtgactgggacggc
atcgtggcttgccaccagggttttgtcctgaccacaacttggaattatcggaaaggctct
atgggggctcacaggctggaaccggagcatttcaacaagaaccgcgctctcaacattcat
gccacggctgtagatgtcacttcctgtgggaactttgctgtgattgcgctgtcttcagga
cacatagacgtctataacatgcagtcggggctccacagaggacagtatggacaagaccga
gcgcattcggggccagttagaggtgtctcagtcgatgcgctgaaccagctgatggtcagc
gccggagccgattgtctgctgaaggtgtggaagttcaaatcgaaagaactgttaaacaca
cacacactgcaagcagcgcctgcttccacactcttacacagagacaggtgagagcaggca
acttaagactgtcgaggtagaagtctgaatttgaataggtgcacactattttaatcttct
gccaaatatatcgatcatttgtaggttctagatggacctactttcagcccggatggacga
tggttgataacagcctccatggactgtaccatcaggacgtgggaccttccatctggcagt
ttggtcgactgtttcctggtagacacggcagccgtgagcgtcagcttctctcctacgggg
aacgtcctcgcctctgcccatgtggacagtctgggtatttacctgtggtccaacaccaca
ctgtgtagtttggtgtcattgcgccctctacctgcagactatgaacctacagtggtcatg
ttgcctggcacctgcccaagcaaagatgacgaagaggaggtcttggaaccagagagctcg
gaaatggacgagtacgtgtctcctgcacagctggatgaacagcttgtcactctctctttg
ctgccggattcacgctggaagaatcttctcaatctggacattattaagaaaagaaacaag
ccaaaagaaccccctaaagtgcccaaagcagccccctttttcatccccactgttcctgga
ctcgtacctcagttcgcacttcctgatacgtcatcggaagaacagtccaaggtgttcaac
attggagttctggcccaaaagtctaatttctacctccagcttgaagaagcactagacagc
aatctctatgaggcagcggtgaggtacctgaaggagttgggcccttctgctattgacaca
gagctgcgaggcttggcaccggatatgggtggacatgttagtgtcatgcagagcttcctc
aggatgatcagcagcatgctaaggctgaagcaagacttcgacctggcgcaggcctatcta
gccctcttcctgaagcttcacctgcggttaattgcagagcagcctgtcctcatgcaggag
acggagatagtgctcgacctgttagaagggacgtggaccaccatacagacgcttctcaac
aagaacatgtgtctcctgtcctacatcaagagtgcgctgctgtag
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