KEGG   Pangasianodon hypophthalmus (striped catfish): 113531361
Entry
113531361         CDS       T05759                                 
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
  KO
K06247  laminin, gamma 3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113531361 (lamc3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113531361 (lamc3)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B F5_F8_type_C Alanine_zipper
Other DBs
NCBI-GeneID: 113531361
NCBI-ProteinID: XP_026777854
LinkDB
Position
Unknown
AA seq 1644 aa
MYSTTFSFAVSILFLLFLSYSYVFAGMDSCHDEEGTPSVCMPKFENAAFNRTIIVSNVCG
SPPEDYCMQTGSTRSCRHCDASDFETNHNATYLNDFHSDEEPTWWQSQSMFYGVQYPNSV
NLTLHLGKAYEITYVRLKFYTSRPESFAIYKRTNETASWQPYQYYSASCRKTYGRDSKGF
IRPGDEERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSPVLQEWVTATDLLISL
NRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVPNEQGRLVCVCEHYTAG
TDCQHCAPFYRDRPWARATADSANQCVKCNCSGRADECVFDAEQYRSTGSGGRCIGCRDN
TAGPHCERCRENFYRSSPLLPCNNCSCNTMGSVSLQCDEEGVCLCRLSVMGVKCDVCRPG
FHSLGPGGCRLCECDERGSVGVCSAGDGRCHCKSNVEGHSCGRCKPGSFNLQLDNPHGCQ
MCFCFGHSLACSSSNQHVTFNITSNFLEDTDGWLGEFSGHQEASLIWKEGEVYLLPYSEE
DVGYYKAPAKFLGNQLLSYGQHLTLSFTAESSELLPKIVTVALEGSGLSVSANLFSKQYV
DSQPSHTPRNIFTLRLTETEVYPSLTPFEFRRLLNNLTALHISNVGGQNYTSQLSGVTLT
SATLAEPYSDIHLAPPAPWVEVCACPPGFMGQFCELCAPGFTRDSPNGGPYSPCVPCNCN
QHGTCHPETGVCDCTDFTTGPSCERCQDGYYGNALTGSPGDCAPCPCPGRTTCAQMPETG
EVVCTNCPAGQRGIRCELCEDGFYGDPLGWQGEVRLCVRCECNENTDPNAVGVCDHVTGR
CLKCLGHTDGDHCEKCQSGYYGNALDRSLRPSQKCLPCLCNPAGTLGSVNECDPHTGRCL
CLRHVTGRDCGQCEFGYFNLRPGLGCDSCNCNPIGSPSLACHPITGQCTCRTGIKGKMCD
ACQMGFFGFSSRGCRACNCDPMGSASMQCHANGTCPCRQGFVGYKCDKCELNHYQNPLTH
QCEECPVCYSLIRDQVTKLKSQLHSLERLLSIYDCKNFRHRIYVRPNHVRQHHRLENHLH
EHQGEDYLPNALEEFLAIQEAREAFISQFTQLETSAQALQLQLHDFASIMNCSLLKEEGS
TSSEEENRTPKATNECKALVETFAAVTESQAQLQEMTSDLNSLVIPFIIPKGPTEWNALV
NESEALVKSHKEMAAHIEGLAGEALKVSNKTYSVLLDLLEDNSTERHLQALTERLSEMQQ
LKENLTRQANETHAAYLSMEELNKEAEAILQNVTSTLPNQPTDINNNLLNTTAAEELNEA
DNTIAQDTQLIQRLDLANRTAELDLLIQSKQQLLNKSREELEPRLENARNNLNTTEEFQQ
LTAFAQGLRETALTSVVEGKKIESEAFSLHRHAEGLEKEWPVVRTQTRAALKREGVVEEK
ILTEVKKKVRHAERVLRPALENATQARDTATQAQKTANAIAKDAKASLSRGKQTRKVSVQ
LKTAVNAAVQQLTEQENLAAHVAGDVQDEADVSLKGVMGSMESAKSQLEGFTHMLAELLG
QIERNTDVEKYDRVLNETASRLKVLRGSVESPALNRKFQMLLGATEDQQKQLMELEKSLQ
DIREERDSLTDIAQNLPKTCPERS
NT seq 4935 nt   +upstreamnt  +downstreamnt
atgtattccactacattttcctttgctgtctccatcctttttcttttattcctctcatat
tcatatgtttttgctgggatggactcctgccacgatgaggaaggcacaccaagtgtctgc
atgcctaaatttgagaacgcggctttcaaccgtaccataattgtttcaaacgtgtgcggc
tctcctcctgaggactactgcatgcaaacgggttccacacgctcctgtcggcattgtgac
gcttcagactttgagacaaaccacaatgccacctacctgaatgacttccacagtgatgag
gaacctacctggtggcaaagccagtccatgttctacggagtgcagtaccccaactctgtc
aatctaacactacacttaggtaaagcctatgagatcacatacgtccggttgaagttctac
accagccgtccagagagttttgccatttacaaacgtacaaatgagacagcatcttggcag
ccataccagtactacagtgcatcctgccgtaagacctatgggagggactccaagggcttc
atccgacctggagacgaggagagaacggcactctgtacggatgagtttagcgacatctct
ccactaacaggaggaaatgtagctttttctacccttgaaggaagacccagtgcctacaac
tttgaccagagcccagtgctacaggaatgggtgacagctacagacctactgatctctttg
aacaggctgaacacctttggagatgagttcttcaaggatgccaaagtgctacgctcctac
ttttatgccatctctgacttttctgtggggggcagatgcaagtgtaatgggcatgccagc
gaatgtgtgccaaatgagcaaggccgtttggtgtgtgtgtgtgagcactacactgctggg
acggattgccaacattgtgccccgttctaccgggaccgtccgtgggctcgtgccactgca
gactctgccaaccagtgtgttaagtgtaactgcagtggccgtgcggacgagtgcgtgttc
gatgcggagcagtaccgcagtacaggtagtggtggacggtgtattggctgtagggacaac
acagcagggccgcattgcgaacggtgcagagaaaacttctacagatcgtctccactgctt
ccctgcaacaactgcagctgtaacactatgggctctgtgagtctgcagtgtgatgaggaa
ggtgtgtgtctctgcagactgagtgtgatgggggtaaagtgtgacgtctgcagacctggc
ttccactccctcggaccagggggctgcaggttgtgtgagtgtgatgaaaggggcagtgta
ggtgtgtgctcagctggagatggaaggtgccactgcaaatccaacgtggaaggacactcg
tgtggcaggtgcaaacctggctccttcaacctccaactcgataacccacatggctgtcag
atgtgcttctgctttggccactcactagcatgttcatcctccaatcagcatgtgaccttc
aacattacctccaacttccttgaggacaccgatggctggcttggtgagttctcaggacat
caggaagcctccttgatatggaaagagggagaagtctacctgctaccttacagtgaggag
gacgtcggatactataaagcaccagcaaagtttctgggaaaccaactgctgagttatggt
cagcaccttaccttgtcatttacggctgaatcaagtgagctgttgcccaagattgtgact
gtggctcttgaaggatctggactgtcagtcagtgccaacttgttttcgaagcagtatgtg
gacagtcagcctagccacacccctcgtaacatcttcacactcaggttaaccgaaacagag
gtttatccatcactcactccatttgagtttcgacgtttgctcaacaacttgactgcgcta
cacatcagcaatgtgggaggacaaaactatacatcccagctgtctggcgtgacattgacc
tctgcgacactggctgagccctactccgacatccaccttgccccacctgccccctgggtt
gaggtgtgtgcatgcccaccaggattcatgggacaattttgcgagctgtgtgcaccaggt
tttacccgagacagtcctaacggcgggccgtattctccctgtgtgccatgtaactgtaac
cagcatgggacgtgccatccagaaacaggtgtctgtgactgcacagacttcacaaccggt
ccctcttgtgagcgttgtcaggatggttactatgggaacgcactgactggcagcccagga
gactgtgcgccctgcccctgcccaggccgtaccacttgtgcccagatgccagagacaggg
gaggttgtatgtaccaattgcccagcaggacagaggggaatcagatgcgagttatgtgaa
gacgggttctacggcgacccacttggctggcaaggcgaggtgcggctgtgtgtaaggtgc
gagtgtaacgagaacacggaccccaatgctgtaggtgtgtgcgatcacgtgactggacgc
tgcctcaaatgtttaggacacacagatggggaccattgtgaaaaatgccaaagcggttac
tatggaaatgctctggataggagtctgaggccttcccaaaagtgtctgccctgtctctgt
aacccggctggcactttggggtcagtgaatgagtgtgatcctcacacaggaagatgtttg
tgcctgaggcacgtgacaggaagagactgtggacagtgtgagttcggctacttcaacctg
cggccagggctgggttgtgacagctgtaactgcaatcccattggctccccatccctagcg
tgtcacccaatcacaggccagtgcacgtgtcggacaggtatcaagggcaaaatgtgtgat
gcctgtcaaatgggattctttggcttttcctccagaggatgcagagcctgtaattgtgac
ccaatgggatcagcgtccatgcagtgccacgccaacgggacatgtccgtgtcgccaaggt
tttgtgggttataagtgtgacaagtgtgagctgaaccactaccaaaaccccttgacccac
cagtgtgaggagtgccctgtgtgctacagtctcatcagagaccaggtgactaaactcaaa
agccaactgcacagtttagagagactgctttccatctatgactgcaagaacttcaggcac
agaatctacgtgcgtccgaatcacgtgcgccagcatcacaggctcgagaatcacttgcac
gagcatcaaggcgaggattacttacccaatgcgctggaggagtttctggccatccaagag
gcacgagaagctttcatcagccagttcacacagctggaaacatctgcacaagccctacag
ctgcagctgcatgactttgccagtataatgaactgcagcctcctgaaggaagaaggaagc
acaagcagtgaggaagagaataggacgcccaaggcaacgaacgagtgcaaagctctcgtg
gagacgtttgctgctgtcacagaatcacaggcacagcttcaggagatgacctcggacctt
aacagtctagtaatcccattcattatcccgaaaggaccgacagagtggaacgcccttgtg
aatgaatcggaagctttggtgaagagtcataaagaaatggctgctcatatcgaagggcta
gctggagaggctttaaaagtgtctaacaaaacttattccgtactgctggatctgctggag
gataactcaacagagcgccatttacaagcgcttactgagcggctatcagagatgcagcag
ctgaaagagaatctcacacgacaggcgaatgagacccacgctgcctacctgtcaatggag
gagctgaacaaagaagcagaggccattttacaaaacgttacctccaccctccccaaccag
cccacggacataaataacaacctcctgaacacaaccgccgcagaggagctcaatgaagca
gataataccatagcacaggatacacagctgatccagaggctagacctggccaacaggacg
gctgagttggatttgctgatccagtccaagcaacagttgctaaataagagcagagaggag
ttagaaccacggctggagaatgcacgcaacaatctaaacaccactgaagagttccagcag
ctgacagcattcgcccaggggctcagagagacagcccttacttcagtagtggaaggaaag
aagatagaatcagaggcattttctctccatagacatgcagaaggcttagagaaggagtgg
cctgttgtgcgcactcagacccgggcagctctgaagcgagagggcgttgtggaggagaag
atcctgacggaggtgaagaagaaggtgaggcatgccgagagagtgctcagacctgcgctg
gagaatgcgacgcaagcaagagacacagcgacgcaggctcagaagacagcgaatgctata
gctaaggatgctaaggcgtctttgtcccggggaaagcagacgaggaaggtgtctgttcaa
ctgaagacagccgtgaatgcagccgtgcagcagctgacagagcaggagaatttagctgct
catgtggcaggagacgtgcaagacgaggctgatgtttctttaaagggagtgatgggtagc
atggagtcagccaagagccagctggagggtttcacacacatgctagccgagctgcttggt
caaatagaaaggaatacagacgtagagaagtacgaccgcgtgctgaacgagacagcctct
cgtctcaaggttctccggggcagtgtggagagcccggcgctgaacaggaagttccagatg
ctccttggagccactgaggatcaacaaaaacagctgatggagcttgaaaagagtctgcag
gacatccgagaagagcgggacagcctgactgatatcgcccagaatctgccgaaaacatgc
ccagagaggagctaa

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