Pangasianodon hypophthalmus (striped catfish): 113531436
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Entry
113531436 CDS
T05759
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113531436 (srek1)
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
113531436 (srek1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
113531436
NCBI-ProteinID:
XP_026777991
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MNGMPSTTVIQITNLSSSVNSEQMRTLFGFLGDIEELRLYPPDHTPLSFSSKVCYIKYKE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPVPSLMPGGGLLPIPS
PAPLQNLGLPLAARGPLHLGLDSSLSAISSQPPIMGNVDPSKIDEIRRTVYVGNLNSQTT
TAEQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFANQDCVARALAFNGVMFGDRPLKGR
PSQRSWRRTSDSHKRRSRDRKYSRSHSRERRKDRDGKMRRGDDADDRRRDKKGRTPLKGY
RRSSRSPSNSRGHRKRSKSRSRSVRKKARSPSPRREKKDRRREHGRESSREWRARSTSRR
RSRDSDRQASKAKFKQTESGYKQKEQDYESDGEDMGSGASEDFSPHAHHNGEYSSMHADE
GEEFSTAE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggatgcccagtaccacggtaattcagattaccaacctgtcctcgtctgtaaat
agcgaacaaatgcgaactctcttcggcttcctcggagatatcgaggagttgcggctctac
cctccagaccacacgccgctttccttctcatctaaagtgtgttacataaaatacaaggag
ccgagtagtgttggtgtggcccagcatttaaccaatacagtgtttattgacagagctctt
attgttgtcccatgtgcagaaggaaagatcccagaggaagccaaggctctgtcccttctg
gcacctgcagccccagtgcccagtttgatgcccggtggaggactgctgcccatcccgagc
cctgccccgctgcagaatttgggtttgccgctggcagcccggggcccgctgcaccttggg
ctcgactcttcgctgagcgccatctcttctcaaccccccatcatgggcaacgtggaccct
tccaaaatcgacgagatccgcaggacggtgtacgtcggcaatctcaattctcagaccacc
acggcagagcagctgctggagttcttcaagcaggtcggcgaggtgaagtttgtgcgcatg
gcaggagacgagactcagccgactcgctttgcctttgtcgagttcgccaaccaggactgt
gtggcccgagcgctcgccttcaacggagtcatgtttggagacagacctttaaagggccgg
ccatcgcagcggtcatggcggaggacgagtgactcgcacaagagacgctccagagacagg
aaatatagccgctcacactccagagaaagacgcaaagacagggatgggaagatgaggagg
ggggatgatgctgatgacaggagaagggacaaaaagggaagaacgcctttgaaaggttac
agacgatcctcgagatcccccagcaacagcagaggacacagaaagaggagcaaatcacgc
tccagatctgtaaggaagaaagcaaggtctccatcaccaaggagagaaaagaaagacagg
aggagagaacacgggcgtgaaagcagtagggagtggagagcgagatcaacatccaggagg
aggagcagagactcagacaggcaggcgagcaaagctaagttcaaacagacggagagtggg
tacaagcagaaggaacaggactacgagagcgatggtgaggacatgggatcaggtgccagt
gaagacttttctcctcacgcccatcacaacggcgagtacagcagcatgcacgcagacgag
ggcgaggagttctccacagctgagtga
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