KEGG   Pangasianodon hypophthalmus (striped catfish): 113531475
Entry
113531475         CDS       T05759                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like
  KO
K12842  U2-associated protein SR140
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113531475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113531475
Spliceosome [BR:phyp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113531475
 Complex B
    113531475
SSDB
Motif
Pfam: RRM_1 cwf21 Surp CID RRM_7 SET_assoc SPT2_N
Other DBs
NCBI-GeneID: 113531475
NCBI-ProteinID: XP_026778046
LinkDB
Position
Unknown
AA seq 687 aa
MADKKSKSTGVKRVLTKKEQEEIKKKEEEKAAEVFEEFLASFDGSEKSGVKTFVRGGIVN
ATKDEEAAEVKKSKLYRPASKFTPASQNVSPSSTESKRSVAKKKTEEKKKSNLELFKEEL
KQIQEEREERYKRKKNDPGGVHTDLDLPLTRRSIFDDDPTVPTTTNLYIGCINPKMTEEM
LCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMK
LGWGKAVRIPPQPLYTPVGVLKPTAPPPPSGLPFNAQPRDRFRNDFSKSRSRTSDDFYKT
LYDAVVTVVIPSERNLLCLIHRMIEFVVREGPMFEAIIMSREKNNPDFRCTPLQKKVARL
YLVSDILYNSSAKVSNASYYRKYFESKLPQIFSDMGEAYRNIQARLQAEQFKQRIMTCFR
AWEDWAIYPESFLIQLQNIFLGLIKPGEELPERTETASPDLDGAPLDGVPLDGTELDGTP
LDDLDGSPMPWEPSSIDGVPVDDIDGVPLGPAMDDIDGVPLDEGLDKTLPSVALSKWERV
DDVEHSAKSNSEDEMSASGVKENEADSDDDSSSDDAASPSRFEGAEFKSSLRNFEMSESK
RTRLRELEVKVMKFQDELESGKRQKKSNMSLQQQVQHYRNKLLQKRTRSRSPRKSKRSRS
PSPQRRSRRSSSRSPHRSHKKSKKSKH
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggcagacaaaaaaagcaagtctacgggagtgaagcgggtgctgacgaaaaaagagcag
gaggagatcaagaaaaaggaggaagagaaggccgctgaagtgttcgaggagttcttggca
tcttttgatggcagtgagaagagcggagtgaagacgtttgtacgagggggaattgtgaat
gccactaaagatgaggaggcagcggaggtgaagaagagtaaactctacagacccgcctcg
aaattcactccagcatctcagaatgtctcgccatcgtctacagagtctaagagatctgtc
gctaaaaagaaaacagaagagaagaagaagagtaacctggaactatttaaagaggagctc
aagcaaatacaggaggagagagaggagcgctacaaaaggaagaagaatgacccgggagga
gtgcacacagatctggacctaccgttaacacggcggtcaatattcgatgatgatcccacg
gtgcccactacaactaacctttatatcggctgcatcaatcccaagatgacggaggagatg
ctgtgtaaggagtttgggaagtacggcccgttagccagcgttaagatcatgtggcctcgg
acggaagaagagaggacccgagtgaccaaccgtggctttgtcgccttcatgacacggaag
gatgcagaaagggcgctggccgctttagatggtaaaacggtgatgggttttgagatgaag
ctgggctgggggaaggccgtgagaatcccgcctcagcccctgtacactcctgtaggagtg
ctgaagcccacggccccgcctcctccctcaggcctgcccttcaacgcccagccccgagac
cgcttccgcaacgacttctccaaatcccgcagccgcacatctgatgacttctacaagact
ctgtacgacgccgtagtgacagtggttatcccatcagaaaggaacctgctgtgcctcatc
cacaggatgattgagtttgtggtgagagagggacccatgttcgaggccatcatcatgagc
cgagagaagaacaacccagacttcaggtgtacaccactgcagaagaaggttgcgaggctt
tatctggtgtcggacatcctgtacaactccagtgccaaagtctcaaacgcatcctactac
cgcaaatacttcgagtcgaagctgccgcagatcttcagcgacatgggcgaggcgtaccgg
aacatccaggccaggctgcaggccgagcagttcaagcaaaggatcatgacttgctttcgt
gcctgggaggactgggcaatctacccagaatcctttctgatccagctgcaaaacatcttc
ctggggctcatcaaaccaggagaggaactgcccgaaaggacagagaccgcctctcctgat
ctggacggcgctccgttagacggcgttcctctggacgggacggaactggacgggacgccg
ctggacgacctggacggatctcccatgccctgggagccatcgtctatcgacggcgtccct
gtggacgatatcgacggcgtcccgctcggccctgcgatggacgacatcgacggcgtgcca
ctggacgaaggcttggataagacgttaccgagcgttgccttgtctaagtgggagcgagtg
gatgacgtggaacactcggctaaatccaactccgaggatgagatgagtgcgagcggcgtg
aaggagaacgaagcggactcggatgacgacagcagcagtgacgatgcagcgagccccagc
aggttcgagggggcggagtttaaaagcagcctgcgcaacttcgagatgtcggagagcaag
cggacccgactccgagagctggaggtgaaggtgatgaagtttcaggacgagttggagtca
gggaaaaggcagaagaaatccaacatgagccttcaacagcaagttcaacactacagaaac
aaattgctacagaagaggacgaggtcgcgttctccgcggaagtccaagcgttcccgttct
ccgtctccacagcgcaggtccaggcgctcctcgtcccgatctccgcaccgctcgcacaag
aaatccaagaagagcaaacactga

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