Pangasianodon hypophthalmus (striped catfish): 113531485
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Entry
113531485 CDS
T05759
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04517
IgSF CAM signaling
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113531485
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113531485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113531485
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113531485
Intermediate filaments
Intermediate filament-binding proteins
113531485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
113531485
NCBI-ProteinID:
XP_026778056
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MIRHPAAIGELCVLLELFPPLPPSRRCAKPRLPSDGEASGPITGRDVAVLTPDLASWEGK
ELIEEQPELGPVVHQKLKEMRECWTHLESTTKAKARQLFETQNHRTTDVPPHSLLDLDKH
LSMLQDEPPHSSHSSQSSHAAYSTHTSPSASAAILSPRTTFSQQLQRIQSMEAQMQLYPG
LMQLNSDISGQSDADGVDMLHRGPMGIEVQGSGGVAETRIVRLIEPLKERRRILLASKEM
HQVTQDLEDEIVWIQERLPLASSTEYGTNIQSVQQLVKNHEALQMEMQARKGRVEEVLER
AEAVAALRTPEVEIIREGAMHVRQLWEVLQVEVERRTVMLDAVSHAQQYYTEAAKAESWL
SGQKLHVLNEENGHDEASTLRLLKEQLALEQKVENYAETVGFLSQQCRRMLELGHPDSEQ
ITKQQAHIDRLYVSLKDLVEQKKTKLEQQYWLYQLKKEVEALEKWISEREAVASSTELGQ
DLEHVTALQERFTEFRAETSTAGQRQMDSVNKMVNEMIDCGHADAATIAEWKDGLNESWA
DLQELMETRAQMLAASHQLHKFFTNCQEVLLQIEGKMRQLPEVRSCQVSTANPGTLQRLL
HSFEHSLQLLVTQVRQLQENASQLRAIYAGEKADTILVREQEVMHAWKELLVACEGSRVQ
VTTVTDKIQFFAMVRELSMWTDGIMGQIGPVEDARDVATLECMISQHQNLKSKMESKSKS
FMHCVEMGKMLLAAHNPAAEEVKEKLEYVMVKQKDLNDKWEHHWEKLQRMQQRLQSAQTS
KPEGTWHTTKESLSSGGEAEGGADEVEQLIRRHEAFRKAASTWKEHFSSLRQAEKLKEEQ
IKHSTTSSLLNRQMFPLSCLVPSSSSSSSSSSLFRSPLQDMLHEPKSGPDLTHTPHTFAQ
RLGSALNPYSPVMNGSPYHRLNQQVGALGTNSSSQTGLNQQGVFGGDSSSYTGLNQVGML
GSDSSSYTGLNQQGVTGANGLNPLSAMGVTEPKTAFAWQQLKADFQPRINHMHKAVGPLL
EAHAGHLVPVGVPPGTEASLELLHGRLQRDPRGSRSDPQMDHLRREREYRLGRHTSSEQE
IQARLNELPMIVRQERHQRRRLERQSSSEHEGSGRHRLQKQDSSDQESGKEGSDKKQTGE
KRSTMAEIVEQVQEREACHARGEVYRPPSSLSAPVSRLDRPRARDRPKPRRRPRPKEPEE
TRRSRSAPAQSAPSTPQPPTHTVHQEGFLYRKHEEEGKEKSPNSKSWVNLYCVLNKGEIG
FYKDARNTTTPYNDEPLLNLAICTFDTTNGYKKKKNVFILRSETDGDYIFLAKDEEDLKR
WVNSINASLSEIEEIAKWEKPTTSSTDPDKSERKERSEGAEPSEKSERSDRSDKREGEKS
SESSEKRDTLERDRMERRGRERGEKERGE
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgattcggcatcccgccgccattggagaactctgtgtccttttggaactgttcccgccc
cttcccccctccaggcgctgtgctaagccccgcctccccagtgatggagaagccagtgga
ccaatcacaggccgtgatgtggctgtcctcacacctgaccttgcctcatgggagggcaag
gagctgatcgaggagcagcctgagcttgggcccgtcgtgcaccagaagctgaaggagatg
agggaatgctggacacatctggagagcaccaccaaggccaaagctcgccagctgttcgag
acacagaaccacagaaccacagatgttccaccgcacagccttttggatctggacaagcac
ctcagcatgctccaagacgagccaccacattcgtcacactcctcacaatcctcacacgca
gcgtactccacacacaccagcccctcggccagcgctgccatcctgagccctcgaaccaca
tttagccagcagctgcaaaggatacagtcaatggaagctcagatgcagctctatcctggt
ttgatgcagctgaattccgacattagcggacagagtgatgcagacggagtcgacatgctg
caccgtggaccaatgggtatcgaggtccagggctcagggggcgtggctgagacacgaatt
gtgcgtctgattgagcccctgaaagaaaggaggcgaatccttctggcctccaaagaaatg
caccaagtcacgcaggacctggaagacgagatcgtgtggattcaggagcgattaccgttg
gcctcctctacggaatacggcaccaatatacagagcgttcagcagcttgttaaaaaccac
gaggctttgcagatggagatgcaggccagaaaggggcgtgtcgaggaggtgctggagaga
gccgaggcagtcgctgcccttcgcactcctgaggtggagatcatcagagagggagcgatg
catgtgaggcagctgtgggaggtgctacaggtggaggtagagcgtcgtacagtgatgctg
gatgcagtaagccatgcccagcaatactacacagaggcagcgaaggcggagtcatggctc
agtgggcaaaagcttcacgttctcaatgaggagaatggccacgatgaagcgagcacatta
aggctactgaaggagcagttggctttagagcagaaggtggagaattacgcagagactgtg
ggcttcctgtcacagcagtgccgccgcatgttggagctgggacaccctgacagtgagcag
atcactaagcagcaggcgcacatcgaccggctctacgtctccctgaaggacctggtggag
cagaagaagaccaagctggagcagcagtactggctctaccagctgaagaaggaggtggag
gctctggagaagtggatctctgagagagaggctgtagccagctccactgagctcggccag
gacctggagcacgtcacggcgctgcaggagaggttcaccgagtttcgggccgaaacgagc
accgcaggtcagaggcagatggactcggtgaacaagatggtgaacgagatgatcgactgc
ggccacgcagatgctgccaccatcgccgagtggaaggacggcctgaatgagtcatgggcc
gacctgcaggagctgatggagaccagagcacagatgctcgctgcctcacaccagctccac
aagttcttcaccaactgccaggaggtgctgttgcagattgaggggaagatgaggcagtta
ccagaggtgcgttcgtgtcaggtcagcaccgccaaccccggcacactacagagactgcta
cactcctttgaacactctctgcagctgcttgtcacacaggtgcgtcaactgcaagagaat
gcgtctcagctccgtgcaatctacgctggcgagaaggccgacaccatcttggtccgtgag
caggaagtgatgcatgcgtggaaggagctcctcgtggcgtgtgagggcagccgtgtgcag
gttaccaccgtgacagacaaaatccagttctttgccatggtgcgtgagctcagcatgtgg
acagatgggatcatgggacaaatcggcccggtcgaggatgcacgggacgtggccactctg
gagtgcatgatctcccagcaccaaaacctgaagagtaaaatggagagcaaaagcaagagt
ttcatgcactgtgtggagatgggcaagatgctgctcgcagcacacaatcctgcagctgag
gaggtgaaggagaagttggagtatgtgatggtgaagcagaaagatctgaatgataagtgg
gagcatcactgggagaaactccagcgcatgcagcagcggctacagtctgcacaaacaagc
aagcctgaagggacatggcacacgaccaaggagtcactgagcagcggtggtgaggcagag
ggcggggccgacgaggtggagcagctgattcgccgacatgaagcgttccgtaaggcggca
tctacgtggaaggagcacttcagctccttacgacaggcagagaaattgaaagaagagcaa
atcaagcactccaccacctcgtctctcctcaacagacagatgtttcctctgtcctgcctg
gtgcccagctcttcctcgtcctcctcttcctcatctcttttccggagccctctgcaggac
atgctccatgagcccaaatctggtccagaccttacacataccccacacacttttgcccag
aggctcggttccgcactgaatccctattctccagtcatgaatggctccccctaccacagg
ctcaaccaacaagtcggggcgttgggcacaaacagctccagtcaaactgggttaaaccaa
cagggtgtttttgggggggacagctcgagttacactggcctaaaccaagttggcatgtta
ggttcagacagctccagctacactggattaaaccaacagggtgtcacaggagctaatggc
ctgaaccccctcagtgctatgggtgtgactgaacccaagaccgcatttgcctggcagcag
ctcaaagctgactttcagcccaggatcaaccacatgcacaaggctgtaggtcctctgctg
gaggcccatgctgggcacctggtcccagtgggtgtgccaccgggcaccgaggcatccctg
gagctgctccacgggcggctacagagggaccctcgcggcagccgctcagacccacagatg
gaccatctgcgcagggagagggagtaccggctcgggcgccacacctccagtgagcaggag
atccaggcgcggctcaatgagctgcccatgatcgtgcgccaggagaggcaccagcggcgc
agactagagcgccagtcgtccagtgagcatgagggcagcggcaggcacagacttcagaaa
caggactccagtgaccaggagtcggggaaagaagggtcagacaagaagcagacaggggaa
aaacgctccaccatggctgagattgttgaacaggtgcaggagagagaagcatgccatgca
aggggagaggtgtatcgtcctcccagcagtctctccgcccctgtctcccgtcttgaccgg
cctcgagctcgtgatcgaccaaaaccacgccgacgaccgcgtcccaaagaacccgaggag
acgcggcggtcacggtcagcaccggctcagagtgcgccgagcacgccacagccgcccacg
cataccgttcaccaggagggcttcctgtaccgcaaacacgaagaggagggcaaggaaaag
agccccaacagcaagtcgtgggtgaatctgtactgcgtactcaacaaaggcgagatcggc
ttctataaggacgccaggaacacaacgaccccatacaacgacgagccgctcctcaaccta
gccatctgtaccttcgacaccaccaacggctacaagaagaagaagaacgtcttcatcttg
aggagtgaaaccgacggggactatatcttcctggccaaagacgaggaggacctgaagcgt
tgggtgaacagcataaacgccagcctgagtgagattgaggagattgccaagtgggagaaa
cccaccacctcctccaccgaccccgacaaatcagaacgcaaggagcgctccgagggggcg
gagccatcggagaagtcggaacgctcggatcgatcggacaagcgagagggggagaaaagc
tccgaaagctcagaaaagagggacacgttggagagagacaggatggagcgacgagggagg
gagagaggagagaaggagagaggagag
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integrated database retrieval system
