KEGG   Pangasianodon hypophthalmus (striped catfish): 113531546
Entry
113531546         CDS       T05759                                 
Symbol
zmat5
Name
(RefSeq) zinc finger matrin-type protein 5 isoform X1
  KO
K13152  U11/U12 small nuclear ribonucleoprotein 20 kDa protein
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113531546 (zmat5)
Spliceosome [BR:phyp03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    113531546 (zmat5)
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-U1 zf-CCCH_2 zf-CCCH_9 DUF6582 YqzH
Other DBs
NCBI-GeneID: 113531546
NCBI-ProteinID: XP_026778136
LinkDB
Position
Unknown
AA seq 173 aa
MGKRYHCDYCDRSFQDTLHNRKKHLNGVQHHRAKKAWFDNFRDAAAILQDERAKQACRKF
LQTGQCVFGPSCRYSHMSEQDMKDLEQHIHEERQQGVDLDQEEATTKPSLEEWLSRREKR
AAQSSGSVLKLEEETAARGIEVPTYLLSIPDLPPSLLPLHPGGWRGKVHTDWG
NT seq 522 nt   +upstreamnt  +downstreamnt
atgggaaagcggtatcactgcgattactgtgatcgcagcttccaagacacgctgcacaac
agaaagaaacatctgaatggcgtccagcaccacagagccaaaaaagcctggttcgacaac
ttccgagatgcagctgcaattcttcaggacgagagagcaaaacaagcatgcaggaagttt
ctgcagacaggtcaatgtgtgtttggccccagctgccggtactcacatatgtctgaacag
gatatgaaggatttggagcaacatattcatgaagaaagacagcagggggtggacttggac
caagaggaagccaccactaaaccttcactagaggagtggctgtccaggagagagaagagg
gcagctcagtcatcaggaagtgttttaaaactggaggaggaaacagcagctagaggtatt
gaagttccaacatatctgctttccatcccagatctccctccatcacttctgcccctgcat
cctggaggatggagaggcaaagtccataccgactggggctga

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