Pangasianodon hypophthalmus (striped catfish): 113531572
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Entry
113531572 CDS
T05759
Symbol
mars
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00450
Selenocompound metabolism
phyp00970
Aminoacyl-tRNA biosynthesis
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
113531572 (mars)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113531572 (mars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phyp01007
]
113531572 (mars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113531572 (mars)
Enzymes [BR:
phyp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
113531572 (mars)
Amino acid related enzymes [BR:
phyp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113531572 (mars)
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
113531572 (mars)
Prokaryotic type
Other AARSs
113531572 (mars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
tRNA-synt_1
GST_C_2
GST_C_3
tRNA-synt_1e
DUF4404
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-GeneID:
113531572
NCBI-ProteinID:
XP_026778183
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MKLFVNEGNPQCVKVLAALEHTAVQCDVQLLSHEERVVSFLSRPVLPAVLLPSGQQLFSA
NAICQYLFEVGGKEITDASRQLLEWEATELQPVLLQALHVAVLQGKSSEAGTLLKKPLSW
LEQCLSGKSTQFLAAETVEVADIVLWAALYPVLSVSALEAGELRSVQGWFERVGQLPACT
TAVQKILPGKDLKALKNFLQKQPAPHTQQKENLPSELEGVEHVMTAEEIEVAAQAWTKGL
AECHDAIERKNPVLPEEGMRNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLRGWN
LLYVCGTDEYGTATENKALEEGLTPQEICDKYYAVHTAIYKWFQIDFDYFGRTTTQQQTE
IAQNIFFRLHERGFLHEDTVEQLCCENCQRFLADRFVEGVCPYCKYPEARGDQCDKCGRL
INAVELKDPQCKVCGQTPVIRTSKHLFLDLPQLEGELEKWLEQSLNTGDWTANAKQITRS
WIRDGLKPRCITRDLKWGTPVPLPEYSGKVFYVWFDAPIGYLSITANYTSEWEKWWKNPQ
QVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLIATEYLNYEDTKFSKSRGVGVFG
DMAKDTGIPSDVWRFYLTYVRPEGQDSSFSWADLALKNNSELLNNLGNFINRAGMFVNKF
FNGCVPEIVLQDEDKRLIAQVSWELKQYIQLLDKVRIRDALKCILNISRHGNQYIQSNEP
WKKIKGGDEDRKRAGTVTGVSVNVACLLSAMLEPYMPTVSRTIRTQLQASDNCASAMLGA
EGCFLRSLPTGHQIGTVSPLFQKLESEQIETLRKKFGGQQGRSEETSTTETKPPNAAEPI
ASQGKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttgtgaatgaaggcaatccgcagtgtgtgaaagtgctggcggcgctcgag
cacaccgcagtgcaatgtgacgtgcagctgctcagccatgaggaacgggtggtgtccttc
ctgagtcgcccagtcctgcctgctgtgctgttgcccagcggccagcaacttttcagtgct
aatgccatctgccagtatctgtttgaggttggtgggaaagaaatcactgatgctagcagg
cagttactggaatgggaagcaaccgaattgcagcctgtgctgcttcaggccctccatgtg
gcagtgctgcaggggaagagcagcgaggctggcacactgctgaaaaaacctctgagctgg
ctggagcagtgtctgagtggaaaaagcacacagttcctagctgcagagacagtcgaagtg
gcagacattgtcttatgggcagcactgtaccccgttctgtctgtctcggctttggaagct
ggtgagctgcgttctgttcaaggctggtttgagcgtgtaggtcagctcccagcatgcacc
acagcagtgcaaaagattctgccaggcaaagatcttaaagctctgaagaatttccttcaa
aagcaaccagctccacacacacagcaaaaggaaaacctgcccagtgagctggaaggcgtg
gagcatgtgatgactgcagaggaaattgaggtagctgctcaggcttggactaaaggactg
gcagagtgtcatgatgccatagaaaggaaaaaccctgttttacctgaggaagggatgcgt
aatgtgctggtcacaagtgcactgccgtatgtcaacaacgtgcctcacctaggcaacatc
atcggctgtgtgctgagcgctgatgtattctccagatatggccgtttgcgtggctggaac
ttgctttatgtgtgcgggacagacgagtacggcactgcaacagagaacaaggctcttgag
gagggtctaacgccccaggagatatgtgacaaatactatgctgtccacactgccatctac
aagtggttccagatcgactttgactatttcggccgaaccaccactcaacaacagacagaa
attgcacagaacatattctttcgtttacatgagaggggatttttacacgaggacacagtg
gagcagctgtgctgtgagaactgtcagcgcttcctagctgaccgctttgtagagggtgtg
tgtccttattgcaaatatcctgaagccagaggggaccaatgtgataagtgtggccgactc
attaacgctgtggagctcaaggatcctcagtgtaaggtgtgtggacagactcctgtgatt
cgcacctctaagcacttgtttcttgacctgccccagctggaaggcgagttggagaagtgg
ctggagcagtctttgaatacaggtgattggaccgctaacgctaagcaaatcacccgctca
tggataagagatggtctgaagccacgctgcatcacacgagatctgaagtgggggacacct
gtaccactcccagaatatagtggaaaggtgttttatgtctggttcgacgcgcccattggc
tacctctcaataactgccaattacaccagtgaatgggagaaatggtggaagaacccacaa
caggtggagctgtacaacttcatggcaaaagacaatgtaccattccacagtgtagttttc
ccctgctctctgctcggggcacaggacaactacacactcgtcaaccacctcatcgctaca
gaatatttgaactatgaggacacaaagttctcaaagagccgtggtgtgggagtgtttgga
gacatggctaaagacacaggcattccatcggacgtttggcgtttctatcttacctacgtg
agacctgagggccaggactcctccttctcttgggccgacctggctctgaagaacaactcc
gaactgctcaataaccttggcaattttatcaacagggcaggcatgtttgtgaataagttc
tttaatggctgtgtgccggagattgttctgcaggatgaagacaagcgtctcattgctcag
gtgtcctgggagctcaagcagtacatccagttgctggacaaagtcaggattcgcgatgcc
ttgaagtgcattctcaatatctctcgtcatggcaaccagtatattcagagtaatgaaccc
tggaagaagatcaaaggaggagatgaggacaggaaacgtgcaggcacagtaactggcgtg
tcggtgaatgtggcgtgtctcctgtcggccatgttggagccgtacatgcccacagtcagt
cggaccattcgtacccagctgcaagcttcagataattgtgccagtgccatgctgggtgct
gagggatgtttcctccgcagcctcccaaccggccaccaaatcggcacggtcagtcctttg
ttccagaagctggagtctgagcaaattgagacactaaggaagaaatttggaggacagcag
ggtcgcagtgaggagacgagcacaacggagaccaagcctcccaatgccgcagaacctatt
gctagtcaaggaaagaagtga
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