Pangasianodon hypophthalmus (striped catfish): 113531592
Help
Entry
113531592 CDS
T05759
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113531592 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113531592 (rnf43)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113531592 (rnf43)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113531592 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
pAdhesive_17
FANCL_C
Motif
Other DBs
NCBI-GeneID:
113531592
NCBI-ProteinID:
XP_026778214
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MRLAAQRLAGLWPWLFTAALQVALGHAGLEVAATRALIKVTLLNPKATVRPITLEGVFAG
SSSGFAEGKLMQSHPLSLCNTSEDERQESFFISIVKLESPESKVPQCLPLLEKARLALNR
GAQAVIFDITDDVNAAIELNSGFLKKPVVMVKAADAEELMGLVNKNEEAKVEINIMMETP
KWPHYEVGILLTVVLVVLAIIMIFAFRSRCRSNRTWDSVHQQTMRAISRLETRTYSSQGC
SGGSHHPRGGRGSNSSSSSGPMCAICLEEFLDGQDLRIISCAHEFHKECVDPWLLQHRTC
PLCMHNIMAGAEPSGRQPQRVRGHPPPEHSQAFLHPHPQHYTASHSFPQHPIPFSLRPHY
PRTLSGPYPQLGAYGGSPPYHTRLLSTSCSYHLAPDGHRARPRHSCRNVGHHYTSPRRPC
HHCHPNRMRHQNHHQNQRHGGSQGRQDEGSCSGASYGTERSGYFPDGPGSDSSSGPCHGS
SSDSVLNCTDVSLQGVYGSCSTFRSSLSSEYDPFVYHNAGSEGPTGSTRPRSLDSGVNQT
SEGLGFEEPQQQQAVFSHVHYHRHRHHYYEEGEPSQGPGRGSDEEQGTSVVAAGNSPMSK
DSTLCQGAHVACHCPKTDPIDRCIDRCGPPGGVEDRDAAPSSPTSSLPGTSVLIPTPACC
HPGHTHCQKTTSCSLESSAPPMPAVHFHQRVDLQDDCSIHIHYGQSPAGYCCPPPLGAAS
TLLPVPVILDSGGLAEWPCCRGARRGWQKQVQQAHSEPQLMGTGTLLDTPLCRGHHSAGH
ELPTEICLYCQSVHNNQGSEEESGV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgccgcacagcgcctggccgggctctggccgtggctgttcacggccgccctg
caggtggcgctgggccatgcgggcctggaggtggcagcgacccgcgccctcatcaaggtc
acgctgctcaaccccaaagccacggtcaggcccatcaccctggaaggggtgtttgctgga
agcagcagcggattcgctgagggtaaactcatgcagtctcatccgctgtctctgtgtaac
accagtgaggatgagcggcaagaaagcttcttcatcagcattgttaagctggagagtcca
gagagcaaagtgccccagtgcctgccacttctggagaaggctcggctggctctaaacagg
ggagctcaggctgtcatttttgacatcactgatgatgttaacgctgctattgagttgaat
tctggcttcctgaagaagccggtggtgatggtgaaggcagcggacgctgaggagctgatg
ggactggtcaataagaacgaggaggccaaggttgagatcaacatcatgatggagacaccc
aaatggcctcattatgaagtgggaatcctcttgacagtcgtcttggttgtgctggcaatc
attatgatctttgcctttcgttctcgctgcaggtccaacagaacttgggactcggtgcat
cagcagaccatgcgggccattagcaggctggagacgcgtacctacagctctcagggctgc
tcaggaggatcccatcatccacgtggtggccgagggtcaaacagcagctccagctctggc
cctatgtgtgccatctgtcttgaggagttcctggatggacaggacctgaggatcatctca
tgtgcacatgagttccataaggagtgtgtggacccttggctgcttcaacaccggacctgt
ccgctctgcatgcacaacataatggcaggtgcagagccgagtggccgtcagcctcagcga
gttcgtggacatccaccgccagagcacagccaagcttttctgcacccccacccacagcat
tacacagcttctcactctttcccccagcaccccattcccttctccctacgtccccattac
ccccgcaccctctcgggaccctatccccagctgggagcctatggcggctcccctccctac
cacactcgcttattgagcaccagctgcagctatcatctggcccctgatgggcaccgtgcc
cgacctcgccacagctgccgcaacgttgggcaccactacacatcaccgcgtcgtccgtgc
caccactgccatcccaaccggatgcggcatcaaaaccaccaccaaaaccagcgccacgga
ggttctcaggggcgccaggatgagggtagctgctcaggggccagctatggcacggaacgc
agtggctacttccctgatggacctggcagtgactcaagctcgggcccatgccacggctca
tccagtgactcagtgctcaactgcactgatgtaagcctgcagggtgtctacggcagctgc
tccacctttcgtagttcgctcagcagcgagtacgacccatttgtctaccacaatgcaggt
tctgaaggtccgacaggtagtaccaggccccgatctctagattcaggagtaaatcagact
agtgaagggcttgggtttgaagaaccacagcagcaacaggctgtattcagccatgtgcac
taccatagacacagacaccactattacgaagagggcgagcccagccaaggaccaggaaga
ggctctgatgaagagcaagggacttcagtagtagcagcaggtaattcacccatgagtaaa
gactcaactttgtgtcagggggcacatgttgcctgccattgccccaaaacggaccctata
gacaggtgtatagacaggtgtggacctcctggtggagtggaggatcgggacgcagctcct
tcatcccccacttcctccttgcctggcacctcagtgctgatccctacaccagcctgctgc
cacccagggcacacgcactgccaaaaaaccaccagctgcagtctggaatcttctgcccca
cccatgccagctgtgcacttccatcagagagtggacctacaggacgattgcagcatccac
atccactatgggcaaagtcccgcaggttactgctgcccccctcctctgggtgcagcatcc
acactgctgcccgtacctgtaatcctggactcaggtgggctggcagaatggccctgctgc
aggggtgcacgaagggggtggcaaaagcaggtgcaacaggctcattctgagccacagcta
atggggacaggcactctattggacacacctctgtgcagaggacatcacagtgccgggcat
gagctgcccacagaaatctgtctctactgccaaagtgtacacaataatcagggatcagag
gaagagtctggtgtttga
DBGET
integrated database retrieval system
