Pangasianodon hypophthalmus (striped catfish): 113531597
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Entry
113531597 CDS
T05759
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113531597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113531597
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113531597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_4
Ank_5
Tmpp129
Motif
Other DBs
NCBI-GeneID:
113531597
NCBI-ProteinID:
XP_026778221
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MEPFSLESDDRTDEERTKAKATKKDRQACGKTKAPMDTDLPEDHGDFSCQVRINLNFSDE
IQGIKAEPDQHEKFDFKRLFDAVSSGDVNRIEGLEDYLRKTNKKLTNCEYRPNGKTALMK
ALLNLKNGDNKTVEHLLGIAERMGHLDKLVNAAYTDAYYEGQTALHIAIERRNKRFAELL
IQKGANVHAKACGTFFQPLNETCFYFGELPLSLAACTNQKDIVDLLMVKADVRCKDTLGN
TVLHALVMVADNSPENTDFVVSMYDYILTKDAAKNQKQKKLEDIKNNQGLTSIKLAAKLG
KIGLFEHILHREFHQEECRHLSRKFTEWAYGPVYASLYDLDSIDTYEPNSVLEIVVYGTE
IPNRLEMLQIEPLNKLLEDKWNRFAHRIFLVKFIVYLIYLIIFTTVSYHREEGEPPFPIK
KYMQENENGIIPTGYLLLAGEVIMAIGSLYFFITVLADIKRKRPSLNTLLVDGYSELLFL
LQAVFFMMCAGLYVIGMQEYLAFLVLSVALCWVNLLYFSRGTRHMGIYSVMIQRMILSDI
LRFLFVYMVFLFGFSAAVVTLLKDDSEVPNASAQKNNTRGRSFFTDILNTTEGCKKPTFK
SIGFTTLELFKFTIGMGDLEFTEKYEYKHVFYVLLISYIVLTYILLLNMLIALMSKTVEK
MSKESTSIWKLQRAITILDLERYACCLRMKLRSGVKRNLGKKEEDWRWCLRVEEVNWKKW
NRNLAIISEDPGECNSVMRTEPQREPSRRGFLREVSRRRTNTRNTRKFLAGQETKPLATS
SV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttttctttggagtcggatgacaggacagatgaggagaggactaaggccaaa
gcaacaaaaaaggatcgccaagcgtgtggaaagaccaaagcaccaatggacactgacctc
ccagaggaccatggtgatttttcttgccaagtccgaatcaatctcaatttttcagatgaa
atacaagggataaaagctgaaccagatcagcatgagaagtttgactttaagaggcttttt
gatgctgtgtccagtggtgatgtcaataggatagagggcctggaggattatctgcgtaaa
acaaacaagaagctgacaaactgtgaatatcggcccaatgggaagacagccctgatgaag
gctctgctaaacctgaaaaatggagataacaaaacagtggagcacttgctgggtatcgca
gagagaatgggacatctggataagttagtgaacgcagcatatacagatgcctactatgaa
ggacagacagctcttcatatagccattgagaggagaaacaagcgctttgctgagctgctc
attcagaaaggggctaatgtccatgcaaaggcctgtgggacattcttccagccacttaat
gaaacatgtttctactttggggagcttccactttctctggcagcatgtactaatcagaaa
gatatagtggacctgctgatggttaaagcagacgtgaggtgtaaggacactctgggcaac
acggttctccatgctcttgtgatggtggctgataacagccctgaaaatacagactttgtt
gtttccatgtatgactatattcttactaaagacgctgctaagaatcaaaaacagaagaag
ctagaagacattaagaacaatcagggacttacttccatcaagctggctgcgaagctagga
aagattgggctgtttgaacacattctgcatcgtgagttccaccaagaagagtgtaggcat
ctgtcccgaaagttcactgagtgggcatatggcccggtgtacgcttcactatatgacctg
gactctatcgacacctacgagccaaactctgtcctggagatagttgtttatggcacagaa
atacctaatcgtctcgagatgctccagattgagccacttaataaactgctggaagacaaa
tggaacagatttgcccaccggatattcctggtcaagtttattgtttatctcatatatctc
atcatcttcacaactgtttcttatcaccgtgaagaaggggaacccccatttccaattaag
aaatatatgcaggaaaatgaaaatggaattattcctactggctacttactgcttgctggg
gaggtcatcatggctatcggatcactctacttcttcattacagtgctggcagatataaag
agaaagcggccaagtctgaacacactgctggtagatgggtattctgagctgcttttttta
ttacaggctgtgttctttatgatgtgtgcggggctgtatgtcatcgggatgcaggagtat
cttgccttcctggtgctcagtgtggctctgtgctgggttaatctgctctacttctctaga
ggaacccgacacatgggcatttacagtgttatgattcagaggatgatccttagcgacatc
ttgcgcttcctctttgtctacatggtcttcctctttggattttcagcagctgtggtgact
ctacttaaagatgactctgaagtacctaatgcatcagcccagaaaaacaatacacgtgga
cggtctttttttacagacattctgaacacaacagaaggctgcaaaaaacccacctttaaa
agcatcggcttcaccactctggagctgtttaagttcactataggcatgggtgacctggag
ttcacagagaagtatgagtataaacatgtattttatgtgctcctcatatcctacattgtg
ctcacctacattctgctgctgaacatgttgattgctctgatgagcaaaactgtggagaag
atgtccaaggaaagcaccagtatctggaaactacagcgtgccatcaccatcttggatctg
gagagatatgcatgctgtctgaggatgaagttgcgttcaggagtgaagaggaatctgggc
aaaaaagaggaggactggcgctggtgtctcagagtggaagaagtcaactggaaaaaatgg
aaccgcaacctggccatcatcagcgaggatcctggcgaatgcaactcagtaatgcgaact
gaacctcaaagagagcccagccggcgtgggttcctacgcgaagtcagccgacgaaggacc
aacactcgcaacactcgtaaatttctggcagggcaggagacaaaacccctggcaaccagc
tcagtgtaa
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