Pangasianodon hypophthalmus (striped catfish): 113531821
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Entry
113531821 CDS
T05759
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113531821 (gen1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113531821 (gen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
113531821
NCBI-ProteinID:
XP_026778538
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MGVNDLWSILSPVKESVPLYSLSGKTLAVDLSLWICEAQHVQAMMGKVTKPHLRNLFFRA
SSLLRMGIKLVFVMEGEAPKIKAETMSKRTGMAFRGSKTKSVPKPATAKNTSRGRFKAVL
RECAEMLDYLGIPWVSAAGEAEAMCAFLDAQGLVDGCITSDGDAFLYGAQTVYRNFNMNT
KDPQIDCYKMSRVETELQLKRETLVGLAVLLGCDYIPKGVPGVGKEQALKLIQNLKETTL
LQKFSDWRKSDSETQEFAVKKVTHCLVCRHPGSAKAHERSGCVFCDSEKFCQPQDYDSQC
PCDWHRTEHARQASSVETVIKKKTLACDMFPFTEIINEFLVPKDKAVNSFKRRKPNLLLM
QNFALDKMEWPKHYTSEKVLALMTYTELMNRSQGTQSSTQIQPIRIYKRRIRNGISCFEI
MWRKPDHYVFPEDCPQEESDVVRTVEEENLFTVAFPDIVQLFHKETAEAKDNKLKKKKPK
AEKEKPVVSSDGVSDLFAQMSLKGSSHPDLLVSSGKDLRTITVLESDADHCSTATLTTAS
KLTKHSNCHENQSASDAPLSSFRQQPEVLASPCHTETLSQAQSSLSVSVVIDQLHLSSID
WDALSFTAAPSPQSQHSKADPQPENKSDDGTKIEGRGSSTAVQSDCVELAAPKTDRLSEC
SLRERVHLRNIMKCSGSQNNEEKESKVQSVGSELKYTDLGHKPLSENPKVPDNSWYQKSE
RSRINTLAPDSKDKTFPKTQRSKDSCPVPVPLKYKFVKPKHFNRPSIDPEQTNKESACKK
SVCRRQGSSSDDSDVENQPLTKQQQSKLKANLKPKPRIVQKTVLAQQLVKQDNNMFSNSV
DTHHGSDSTTPEKQPHNMGFSRTNPITQTCSKKSDDDSDASICSPLPLAERLKLKFNK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaatgatctgtggtcaatcctgagtccggtgaaggaatctgtcccgttgtac
agtctctcagggaaaactctggctgtggatctcagtctgtggatctgtgaagcccagcac
gtccaagccatgatgggcaaagtaacaaaacctcatctccgcaatttgttttttcgtgca
tcttccctccttcggatgggcatcaagctggtttttgttatggaaggagaagctcccaag
attaaggcagagactatgagcaagagaacagggatggccttccgtggaagtaaaaccaag
agtgtcccgaaaccagcaacagccaaaaacaccagcagaggacgctttaaagctgtgctt
agagagtgtgctgagatgttagactatctaggcataccgtgggtgtctgcagcgggtgag
gcagaggcgatgtgtgcgtttttggatgcgcagggtttggtggatggctgcattaccagt
gatggggatgctttcctgtacggcgcacaaactgtctacagaaacttcaacatgaacaca
aaggaccctcagatagactgctataagatgtccagagttgagacggagctgcagctgaag
cgagagacactcgtgggcctggctgtgctccttggctgtgattatatacctaaaggtgtt
ccaggtgtcgggaaagaacaagctcttaaattaatacagaatttaaaagaaacaactctt
cttcagaaattcagtgattggaggaaatctgattccgagactcaggagtttgctgtgaag
aaggtcacccactgcctggtgtgtcggcaccccggttctgctaaagctcatgagcgcagt
ggctgtgtgttctgtgacagtgagaagttctgtcagcctcaggactatgactcgcagtgt
ccctgtgactggcaccgcactgagcacgctcgccaggcctcttctgtcgaaacagtcatc
aaaaagaaaaccctggcctgtgatatgttccctttcacagagatcatcaatgaatttctg
gttccaaaggacaaagctgttaatagttttaaaagacggaaacccaacctactcctcatg
cagaattttgctctggacaagatggagtggcccaaacattacaccagcgagaaagttctt
gcgctgatgacctacactgaacttatgaacagaagtcaagggacacaatcatcaacacag
atacaacccattcgaatatacaagcggcgcataaggaatggtatctcctgctttgaaatc
atgtggcgtaaaccagatcattatgtatttcctgaggactgccctcaggaggagtcggat
gtagtgaggactgtggaagaggaaaacctgtttactgtggctttcccagacattgtccag
ctcttccacaaggaaacagcagaggccaaggacaacaaattaaagaaaaagaaaccgaag
gcagagaaagagaagccagttgtttcttctgatggagtgtccgatctttttgctcagatg
tcactgaaaggttcttcacatcctgacctcctcgtatcctcagggaaagacttacggacg
ataactgtattagagtctgatgctgaccactgttccactgccacactaactactgcatca
aaactcactaaacactctaattgtcatgaaaaccagtcagcctctgatgcccctctctcc
tcatttagacaacaaccagaggttctagcttcaccctgccatacagaaacattatcacag
gcccagagttccctttcagtatctgtagtgattgatcagcttcacttgagtagcatagac
tgggatgctttgtccttcactgctgccccatctcctcagtctcagcacagtaaagctgat
cctcaaccagagaacaaatcagacgatggaaccaaaattgaaggccgtggctcatctact
gctgttcagtcagactgtgtagaattagcagctccaaagactgaccgactttcagagtgt
tcactgagggaacgagtccatttgagaaacatcatgaagtgttctggttctcagaataac
gaagagaaagaatccaaagttcagagtgttggttctgaactcaaatacactgatttaggt
cacaagccattgtctgagaatcctaaagtaccagataactcatggtatcaaaaatcagag
cgtagcagaattaacactttagctcctgattcaaaggataaaacattcccaaaaacacag
cggtccaaagattcctgccctgtcccagtgccactgaaatacaaatttgttaaaccgaaa
cacttcaacagaccatccatcgatcctgagcagacaaataaagaaagtgcatgtaagaag
agtgtttgtagaagacaaggttcttccagtgatgacagtgacgtggagaatcagccccta
accaaacaacaacaaagcaaactgaaagccaatctcaagcctaaacctcggattgtacaa
aaaactgtcctagcacaacaactcgttaaacaggacaacaatatgttttcaaattctgta
gacacacatcacgggtcagactccacaacccctgaaaaacaaccacacaatatgggcttc
tcaagaacaaatcccataacacagacatgcagcaaaaagagtgatgatgattcagacgct
tcgatttgtagccctttgccactagcagagaggctgaaacttaaatttaacaaataa
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