Pangasianodon hypophthalmus (striped catfish): 113531859
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Entry
113531859 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113531859 isoform X1
KO
K08127
epiphycan
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phyp00535
]
113531859
Proteoglycans [BR:
phyp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
113531859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
Anophelin
LRRNT
Motif
Other DBs
NCBI-GeneID:
113531859
NCBI-ProteinID:
XP_026778593
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MSELKCRTIWESGRQRWMIMMMPCRLVLGLLVLNVVLASPPRYTRQVEPDYDEDFDKVDV
EYYDELTTDEPEIEISTLSPDEDNDPTPGASLEEEEEEPEEDPEKESGDRTELPIMPSLI
PSGSGVSGVLMGPDAPGEEELRLTPTEILHISGESLGSGDMLSSGGSGASGASGVFGKIP
DAREYHSGETLGSGGSGGLSSGGSADVSSGDISSEGSVDLGSGISGDLVSGVSGEFVSGV
SGGFVSGVSGNFVSGVSGDFVSGVSGDFVSGVSGDFVSGVPRDFVSGVSGDFVSGVSGDL
VSGVSGDFVSGVSGDLVSGVSGDYVSGVSGDLVSGVSGHFVSGESGDFVSGVSGVSGDVD
SRVSEEFVSGDSGDFVSGVSEDFVSGASGDLISGDSEEHISGDSGDFGSGPSGVSGEEIT
LVPGREEQIYITVTTGPEEVSGETGAPEKPLLPVEPVTLGPPEESGVPEEWVTIIPTLKE
EEMLFPTTQTPGSTTGSGLPESPEPDVDVIETDIPGMPTCVLCTCLGGSVYCDDVNLHNV
PPLPKDTTHFYARYNRITKINKSDFANMNKLKRIDLTSNAISKIEDGALFGLPALEELVI
RENSVAQLPALPGTMTLVDASHNHLGRTGIQNEAFKDMTGLLYLYLTDNGIDHIPVPLPE
SLRSLHLQNNNIQMIHEDTFCKQNDLNYIRMALEDIRLDSNPVNLSRTPQAYVCLPRIPV
GALI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagctgaagtgcaggaccatctgggaaagcgggagacagaggtggatgataatg
atgatgccatgcaggttagttttgggactcctggtcctgaatgtggttctggcttctccc
ccaagatacacccgacaagtggagccagactacgatgaggacttcgacaaggtggacgtc
gaatattatgatgagctgaccacggatgaacctgagatagagattagcactctgtcccca
gatgaggacaatgatcccacacctggagcttcactagaggaagaggaagaggaaccagaa
gaggatccagaaaaagaaagtggggatagaacggaattacccataatgccttcgctcatc
ccatcaggctctggagtatcaggggttttgatgggaccagacgctccgggagaggaagag
ctgcgtctgacgcccactgaaatccttcatatctctggagaatctttgggttctggggac
atgctgagttctggaggttctggggcttctggagcttcaggggtttttggaaagattccc
gatgctagagaataccattctggggagactctgggttctggaggttctgggggcttgagt
tctggaggctctgcagatgtaagctctggagatattagttctgaaggctctgtagacctt
ggttcaggaatctctggagaccttgtgtcgggagtatctggtgaatttgtttctggagta
tctggtggctttgtttctggagtgtctggaaactttgtttccggggtctctggagacttt
gtttctggagtgtctggagactttgtttctggagtgtctggagactttgtttctggagtc
cctagagactttgtttctggagtctctggagactttgtttctggagtatctggagacctt
gtttctggggtatctggagactttgtttctggagtatctggagaccttgtttctggagta
tctggagactatgtttctggagtatctggagaccttgtttctggagtatctgggcacttt
gtttctggagaatctggagattttgtctctggagtctctggagtctctggagacgttgat
tcgagagtatctgaggagtttgtctctggagactctggggactttgtttctggggtctca
gaggactttgtttctggagcctctggggaccttatttctggagattctgaggaacatatt
tctggagattctggggactttggctctggaccctctggggtttcgggtgaagaaataaca
ctggttcctggcagagaggagcagatctatattacagttaccactggccccgaagaagtc
tctggggaaacgggggcaccagagaaacctctactccctgtggagcctgtgactctaggg
cctcctgaggaatctggggttcctgaggaatgggtaacaatcatccctactctaaaggaa
gaggagatgctgtttcccaccacccagacccctgggagtacaacaggttcagggctacct
gagagccctgagcctgatgttgatgtcattgaaactgacattccaggcatgcccacctgt
gtgctgtgtacctgcctgggaggatctgtgtactgtgatgatgtgaatttgcataacgtg
cctcctcttcccaaagataccactcacttctacgcccgctacaacaggattactaagatc
aacaaatcagactttgctaacatgaacaaactgaagcggatcgacctgacaagtaatgcc
atctcaaagatcgaagacggcgctctcttcggcctgcccgctttagaggagctggtaatt
cgagaaaacagcgtagctcaactcccagcactgccaggcacaatgacccttgttgatgcc
agtcacaaccacctgggcagaactggtatccagaacgaagccttcaaggacatgacagga
ctactttacctctacctgacggacaacggcatcgatcacatccctgttcctctgcctgag
agtctgcgctctctgcacctacagaacaacaacatccagatgatacacgaagacacgttc
tgcaaacagaacgacttgaactacatccggatggcgctggaggacattcgcctggacagc
aaccccgtcaacctcagcagaactccacaggcttatgtgtgtttgccacgtattcctgtt
ggcgcccttatttaa
DBGET
integrated database retrieval system
