Pangasianodon hypophthalmus (striped catfish): 113531889
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Entry
113531889 CDS
T05759
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113531889 (usp6nl)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113531889 (usp6nl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
113531889
NCBI-ProteinID:
XP_026778653
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MERQSFTKEIQQEWEQASDGEQDAAVKLDQERAEIVARYDKGVEGGTVEPWEEANYDLYR
VVDRFGFLHENELPASNAFEEKQKQLELERTEKWLKMLKSWDKYKNSEKLVRRIYKGIPL
QFRGQVWCLLLDVPKIKEEKKDFYEKLKMRARDLSPDIRQIDLDVNRTYRDHIMFMRRYD
VKQQDLFHVLTAYSMYNREVGYCQGMSQITALLLIYMNEEDAFWALVRLLSGQKHAMHGF
FVPGFPKLLRFQEHHDRILKKMMPKLKQHLDSQEVFTSLYTMKWFFQCFLDRTPFTLTLR
IWDIYILEGERVLSAMSYTILKLHKKALMKFSMEDLVEFLQVTLSKDFFFDDDYVIEQLQ
SSMSELRRSKLELPPPGKDEEFPTKPLGQLPPEPEGLAKEKANHIANGRMEALPSPSTAT
ETTVSANGEKKDSVDKTPQKAEKRGETKEATPPESGKPQVSSSQNSNVGPSGRRDIGPRW
VKPSEGRLAAMMEGHTILSSTVPSSPTISLASEQPRHHRPRSRGFVSGSNRGSNASQYDN
VPLSDGDVADIPDFTHVSEPHQYMAPSVRHGSPTRPPSGGITAPTFRIPKNPPVHLMSDP
RQPLHYTQGMMPVYSPYPPKMQPENRAYGTAYDERAYGTTVRSTPPNRSPEKVMMNNSYA
THRRQPINVDFVGQMDSLVESGHFPRQPTRHVDQRYERQWQGQGWYGEMDVDVASLRTPG
GLPRSSSFQKAQLSPVHPGQEFTFPPVPVSDNMMHYRAVTGRKQMPTVFGGVHYRQEAFA
MQESMLL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcagagctttactaaggagatacagcaagaatgggagcaagcgtctgacgga
gagcaggatgccgctgtgaagttggatcaggaacgggctgaaatcgtagccagatatgac
aagggtgtggaaggtggtacggttgagccgtgggaggaggcgaactatgacctctacaga
gtggtggaccgcttcggcttcctgcatgagaatgaacttccagcctctaatgccttcgag
gaaaagcaaaagcagctagaactggagaggacagaaaaatggttgaagatgctgaaaagc
tgggacaagtacaagaacagcgagaagctggtaaggaggatctataaaggaatcccacta
cagtttcgaggacaggtctggtgtctcctccttgatgtccccaaaattaaagaggagaag
aaggacttctacgagaagctgaagatgagagcgagagatttgtcccccgatatccgtcaa
atagatctggacgtgaaccgcacatacagagaccacatcatgtttatgcgccgctatgac
gtcaagcagcaggacctgttccacgtcctcacggcctactccatgtacaacagggaggtg
ggctattgtcaaggtatgagccagatcactgctctcctcctgatttatatgaatgaagag
gacgcattctgggctctggtcagactgctatctggacagaaacatgcgatgcacggattt
ttcgtgccaggttttccaaagctgctgcgcttccaagagcaccatgaccgcatcctgaag
aagatgatgcctaaacttaaacaacacctagacagccaggaggttttcaccagcctctat
accatgaagtggttctttcagtgctttctggatcgtacccctttcacattaaccctcagg
atatgggacatctacattctagagggagagagagttctgtctgcgatgtcctacaccatc
ctcaagctccacaaaaaggccctgatgaagttctctatggaggaccttgtggagttcctc
caagtcactctctcgaaggatttctttttcgatgatgactatgtaatcgaacagctccag
agctctatgtctgaactcagacgctccaaactagaacttcctcctccaggtaaagacgaa
gagtttcctacaaagccgctgggccagcttccaccagagcctgagggattggcgaaagag
aaagccaatcacatcgctaatgggcggatggaggctctgccctctccgagcacagccaca
gaaacaaccgtttcagcaaacggagagaaaaaagactcagtggataaaacgccacaaaag
gcagagaaaaggggggagaccaaagaagccacgccccctgagagcggaaaaccgcaagtg
tcatcgagtcaaaactcgaatgtgggtcccagtggacggagagacattgggccacgctgg
gtaaaaccgtccgagggcaggctggcggccatgatggagggccacacgatcctcagtagc
acagtaccctcttctcctaccatatcattggccagtgaacagccgcggcatcatcgtcct
cgctcccgaggtttcgtgtccggctccaaccgtggctccaacgcctcacagtacgacaat
gtcccattgtccgatggagatgttgcagacattccggattttacgcacgtttcagaacct
catcagtacatggcaccatctgttagacatggaagccctacaaggccccctagtggtggt
atcactgctccaactttcagaattcctaaaaatccacctgtacacttgatgtctgaccct
cgccagcctttacactacacacaaggcatgatgcctgtttattcgccctatccacccaaa
atgcagccggaaaacagagcgtatggaacggcatatgatgagagggcatacggtactaca
gtgcgctccacacccccaaatcgctcaccagaaaaagtgatgatgaataacagctacgcc
acgcaccggcgccagccaataaatgtcgattttgtaggccagatggacagccttgttgaa
agcgggcatttcccgaggcagcctactcgtcacgtggatcagcgctatgagaggcagtgg
caaggccaaggctggtatggtgagatggacgtggatgtggcgtccctgcgcactccaggt
gggttaccccgctcatcaagctttcagaaagcccagctctcacctgtacaccccggtcag
gaattcaccttcccaccagtgcccgtctcggacaacatgatgcactacagggccgtgact
ggcaggaaacagatgcctacggtgttcggaggagttcattaccgacaagaggcctttgcc
atgcaggagtccatgctgctctga
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