Pangasianodon hypophthalmus (striped catfish): 113531960
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Entry
113531960 CDS
T05759
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113531960 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113531960 (gli1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
113531960 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
113531960
NCBI-ProteinID:
XP_026778765
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MPVVMQPHHRLYHYNNTSQPSKGLAPSIKSPYSEVSPVCGAPPCGQPPESRAMYNPSFNP
GTCMDPYMRPPQGHPPHGMMGHRGMPPPEGGNGTPYCSQSNTMSAHHGFPHNQSGPEHLG
SGDGSRFSTPRSILKLSKKRALSISPLSDTSVDLQTVIRTSPNSLVAFVNSRCGQNAASS
YGHLSVGALSPSMGYSSSTNYQSRPQGNMYGTPLGHTPAPCHGPPTRLPPHNPRLHAPPK
HGHLKAEPIIGNVMDGINVKSLEEHSEGDVASPSSTGTQDPLLGLLEGRDDLDKEEKPEP
EAVYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWKDCSREQRPFKAQYMLV
VHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRA
KHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPGSA
LTSAGQSSELMVEKEERTREDCKLLAPENTLKSQPSPGGQSSCSSERSPLGSANNNDSGV
EMNLNAAGSLEDLTAVEDGGGTSVAESNGGVGSGGMGMSAQALKRLENLKIDKLKQIRRQ
TPPGRGTVNKLPALSASGEIIGMCGPSPLLSNRRVMELSTPDLGGGGIGGIGRMVMPCPP
SDRRGSGTSSLSSAYTVSRRSSVVSPYLSSRRSSEVSQVGTGGHCQSVIGNDVGGDPLSP
ETSHRTGLCQSTSGLPGLPCLTAAEQYSLKAKYAAATGGPPPTPLPNMEQPGTPSRRSGF
LSEYDGQPLPPFLHQVGTRRHSANTEYGTGVIYPHQAPGNNMRRASDPVRSGADPQGLPK
VQRFNSLSNMTLMGRRNALQHCGSDANVTRHMYSPRPPSITENVMMEAMAMEPQRNTTEG
RDHGSMIQGADRAYMGYQQSQSHPRTGDQLSPGNEGMGCLDPSYQSQMQGQYHSQRGNIG
VGETMGQNEISNTLLQQAEYSMSTCQLSPSGPHYPGLGQPSEGSGPWGQNGQLHNPHVGM
QAAMQFQDAGLQGQQYSQGLYDPNTDPNHQRVTIKPEQFHPPMGGSNACQNAKALQQHCQ
PSTMEVCQQGYAPQTKEHGLISKSSNPSCDFVHGQIKTQTDHHQHQSQAGSFLHGGSLSL
GCAGSVLAEDRRSQTPMLQVKEMMVRNYVQSQQALLWEQQQEQQTANSSLPRKPESMELG
AQTALMQHSPQDQQLNQNIYHNSYQGYSNQNVMSPSGHSQASSSVPVKEQMAGMQDSSYS
HDMVPHPPQGRKPLSRQSSLSQKANGAYLSSPPNVSPGHSTASPRRSVRLPPVHQQQQHT
DNFYYSGQIHMHHNMDKSLEAHDGSCRTQQHLAGIEPSTKAASVAYPQSASMSNTLENLD
LENAQIDFASIIEDPDPSSYSPVNPVLGHQSSSQASSRLTTPQNSITLPSNLSNMAIGDM
TSMLTSLAGENKYLNTMT
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggtcatgcagcctcaccacaggctgtatcactacaacaacaccagtcaacca
agcaaaggtctggcgccatcaataaaatcaccctacagtgaggtatctcctgtgtgtggt
gctcccccttgtggtcaacctccagaaagcagagcaatgtacaatccatccttcaaccct
ggaacctgcatggatccttacatgcggcccccgcaaggacacccaccccatggcatgatg
ggacaccgtggcatgcccccacctgagggaggtaatggtaccccctactgtagccagagt
aacacaatgtcagcgcatcatggctttcctcacaaccagtcaggcccagaacacttgggt
tcaggagacggttctcgtttctccactcctcgttccatactgaagttgagcaagaagcga
gcactgtccatctctcctctgtctgatacaagcgtggacctgcagacagtcattcgcaca
tctcccaactctctggtggcatttgttaactctcgctgtgggcaaaatgctgcaagctca
tatggacacctatctgtgggagctttgagtccatcgatgggttactcaagctcaacaaac
taccagtccaggcctcaagggaacatgtacggaacgccgcttggccacacccctgctccc
tgccatggacccccaactcgccttcctcctcacaacccccgtctgcatgcacctccaaaa
catggacatctgaaggcagaacccatcataggtaatgtgatggatggcattaatgtgaag
agtttagaagagcattcagaaggagatgtggccagtccatcttccactggaactcaggat
cctcttcttgggcttctggagggcagagatgatttggataaagaggagaaaccagagcct
gaggccgtctatgagaccaactgccactgggagagctgcagcaaggagtttgacacccag
gaacaacttgtgcatcacatcaataatgagcatatccatggtgagaaaaaagaatttgtg
tgccactggaaggactgctctcgtgagcagagaccatttaaggctcaatatatgctggtg
gtacatatgcgtagacacactggcgagaaacctcacaagtgcacttttgagggttgcaac
aaagcatactctcgtctggagaacctgaaaacacacctgcgctcacacactggtgagaag
ccatatgtatgtgagcatgagggatgtaacaaggctttctctaatgcctcagaccgtgca
aagcaccagaacaggacacactccaatgagaaaccctatgtgtgcaagatccctggatgt
acaaagcgttacacagacccaagctccctacgcaagcatgtaaagacagttcatggacct
gaggctcacataactaagaaacaccgtggtgacactggacctcgaccaccaggttctgct
ctgacctctgcaggtcaaagttcagagctgatggtagaaaaagaggaaaggaccagagag
gattgcaaacttctggctcctgaaaatacactaaagtctcagccaagtcctggaggccag
tcatcctgcagtagtgagcgctctccattagggagtgcaaacaacaacgacagtggtgta
gagatgaacctgaatgcagcaggaagtctggaagacctgacagcagtggaagatggaggg
ggaaccagtgtggctgagtctaatgggggagtgggttctgggggtatgggtatgtctgca
caggccctgaagaggctggagaacttgaagattgataaactaaaacagatccgcaggcag
accccaccaggccggggcacagtaaataaattaccagcactttcagcatcaggtgagata
atcggcatgtgtggcccctcccctttgctttctaatcgtcgtgtgatggagctctctacc
ccagacctgggtggaggtggtatagggggaatcggcagaatggttatgccttgcccaccc
agtgaccgccgtggaagtggtaccagtagtttaagctccgcctacactgtgagccgtcgt
tcctctgtggtttccccttacctatcaagtcgacgctcaagtgaagtatctcaggtgggc
acaggtgggcattgccagtctgtcattggaaatgatgtgggtggggacccattatcaccc
gagaccagccacagaactggtttgtgccagagcaccagtggattgccaggtctaccatgt
cttacagctgcagaacaatacagtttgaaagctaaatatgcggcagcaactggtggacca
ccgccaacacctctacccaatatggagcagcctggtacccccagcagacgaagtggtttc
ttgagtgaatatgacggtcagccactcccaccattccttcatcaagtgggaaccaggaga
cacagtgccaacaccgagtatggaacaggcgttatttatccacaccaggctcctggcaac
aacatgcgacgtgccagtgatcccgtgcgctctggagctgacccacaaggcctacccaaa
gtgcagcgctttaacagcctgagtaacatgacattgatgggccgtcgtaatgccttgcag
cactgtgggtctgatgccaatgtcaccagacacatgtattcaccacgaccgccaagtatt
actgagaacgtgatgatggaggccatggcaatggagcctcagaggaataccacagagggc
cgggatcacggaagcatgatacaaggtgcagacagggcctacatgggctaccagcagtct
cagtcccatcctcgtactggtgaccagctttctcctgggaatgaaggcatgggatgcttg
gatccttcctaccagtcacagatgcaggggcagtaccacagtcaacgtgggaatataggt
gttggagaaactatgggtcagaatgagatttcaaatactctcctccagcaagccgagtac
agtatgagcacctgtcagctcagcccctctgggccacactaccctggcctggggcagcct
agtgagggatcaggaccctggggacaaaatggccagctccacaatcctcatgtgggtatg
caagcagctatgcagttccaagacgcaggattgcagggacaacagtattctcaaggtttg
tatgatcccaacactgatcctaaccatcagagggtcactatcaaaccagaacagttccat
ccacccatgggaggctccaatgcctgccaaaatgccaaggctcttcaacagcattgccag
cctagcactatggaggtatgccagcaagggtacgcaccacagacaaaagagcatggttta
atcagcaaatcttccaaccccagctgtgactttgtccatggtcagatcaagacccagact
gatcatcatcaacaccaaagccaggctggatcatttctccatgggggaagcttgagtctc
ggctgtgctggctctgtgctggctgaggaccggaggtcacagactccaatgctgcaggtg
aaggagatgatggtacgaaactatgtgcaatcacaacaggcactcctttgggagcagcag
caagagcaacaaacagcaaatagtagtctccctcggaagccagaaagcatggagttggga
gcacagacagcactgatgcagcatagtcctcaagatcagcaactaaatcaaaacatctac
cataacagttaccagggctactcaaatcagaatgtcatgagtccctcaggacatagtcaa
gcatccagctcagtgccagtcaaggaacagatggctggcatgcaggattcttcctacagt
catgatatggtgccacatccacctcagggtcgaaagcctctgagtcgccagagcagtctt
tcccagaaggcaaatggagcatacctaagcagcccacctaatgtaagtcctggtcattct
actgccagtcccagaagaagtgtcaggttaccacctgttcatcaacagcagcaacacact
gataatttctattactcaggccagatccacatgcaccacaacatggataagtctctggaa
gcccatgatggatcctgccggacccagcagcaccttgctggaatagagccttcaacaaag
gctgcttcagtggcatatccccagtctgcatctatgtcaaatacgcttgagaacttggac
ttggagaatgctcagattgactttgcttccatcattgaggatccagatccttcatcttac
agcccagtaaatccagttctgggccaccaatcatcctcccaggcctcctcccgtcttacc
actccgcaaaactccatcacccttccctccaacctatctaacatggccattggagatatg
acctccatgctgacatcccttgctggggagaacaagtatttgaacacaatgacttaa
DBGET
integrated database retrieval system
