Pangasianodon hypophthalmus (striped catfish): 113531968
Help
Entry
113531968 CDS
T05759
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113531968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113531968
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
113531968
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
113531968
NCBI-ProteinID:
XP_026778771
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MPEARGQDTVIEPAEDPQIRREKGQGTTPEQREKWANKTEFLLSMAGEIIGLGNVWRFPY
LCYKNGGGVFFIPYFVFLFFCGIPVFFLETALGQYTSEGGITAWRKICPIFEGIGVASQV
IVIYLNIYYIVVLAWAVFYLFSCFQTTLPWISCAHEWNTESCHVYNKSLQDSGLHKADAD
WSFLYNETYDYSRSINFSAPYKVVSPEEEFWLHRVQRISSSDFLGPPHYDLTLCLLLVWI
ICYFCIWKGVKTTGKVVYFTATFPYVMLLILFFRGVTLPGAGAGISYYLYPDISKLSNPD
VWCDAGTQVFFSYAVCQGVLTALGSYNKYHNDCYKDCIALCALNSGTSIFAGFAVFSILG
YMAHELSLPMEDIVKAGPGLAFIAYPKALSLLPGPQFWSVLFFLMVLFLGLDSQFVCVES
LATALTDVFPEILRKPKRREILVLLIAVVCFLLGLPLVTPGGLHLFKLIDTYGPSGTNLL
LIACFETLVIAWVYGADRFFDNIEDMIGYPPLPVLKYCWLFVTPFICGATLLYDLIRSPP
LSSSADFVPSWGSGVAALLTLTPMICVPIFILVAVKRGPYLIVPSADLQQRSPNKPRLTL
CEHVIIKRQKLSHTEGDKSVEEKTLKEDTTDM
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggccagaggacaagacactgtgatcgagcctgctgaggatcctcagatacgg
agagagaagggccaaggaacaacgccagagcagagagagaagtgggccaacaagaccgag
tttctgctgtccatggctggtgaaatcataggcctgggcaatgtgtggcgctttccttat
ctctgctacaagaacggaggaggtgtattcttcatcccttattttgtcttcctcttcttc
tgtggcatccctgtctttttcctggagactgcattgggtcaatacaccagtgaaggaggg
atcacagcctggaggaagatatgtcctatatttgaaggaattggtgtagcatctcaggtt
attgtcatctacctgaatatctactacattgtggttcttgcctgggcggtcttctacctc
ttcagctgtttccagaccacattgccttggatctcctgtgcccacgaatggaacacagaa
tcttgtcatgtgtataacaaaagcttacaggactctggcctgcacaaggcagatgctgac
tggtccttcctgtacaatgaaacctatgactacagtagaagtatcaacttctctgcacct
tacaaggttgtctctccagaggaggaattctggcttcatcgcgtgcagaggatatccagc
agtgatttcctgggcccaccgcactatgacctgacactctgtcttttgctggtctggatt
atctgttacttttgcatctggaaaggagtcaagaccacaggcaaggtggtctacttcaca
gccacgttcccatatgtcatgctgctgattctgtttttccgaggagtcactctacctggt
gctggggcgggaatcagctattacctgtaccctgatatctccaaactctccaatcctgac
gtttggtgtgacgcagggacccaagtctttttttcctatgccgtgtgtcagggtgtcctc
accgctttgggaagctataacaaataccacaatgattgctacaaagactgcatcgctctc
tgtgccctgaacagtggcaccagcatctttgcaggctttgctgtattctctatcctgggc
tacatggctcatgagctgtccttgcctatggaggacatagtgaaagcaggtccaggcctg
gcgtttatagcatatcccaaagccctgtctctcctcccaggccctcagttctggtctgtc
cttttcttcctgatggtcctcttccttggactagacagccagtttgtgtgtgttgagagt
ctagccacagcactcaccgatgttttccctgaaattctgaggaagccaaagcgcagagag
attctggtgttgctcattgctgtggtctgcttcctgctgggccttcctctggtcactccg
ggtgggctccacctttttaagctgatagacacgtatggccccagtggaacaaacctgctc
ctcatcgcctgcttcgagacgcttgtcattgcctgggtgtatggtgcagaccgttttttt
gataacatcgaggacatgataggatatcctcctttgcctgtgctgaagtattgctggctc
ttcgtcaccccgttcatctgtggagccactctcttgtatgatctgatcaggagtccacca
ctcagcagttcagcagacttcgtaccgagctggggttccggagtcgctgccctgctcact
ctcacaccgatgatctgtgtccccatcttcatcctggtcgccgtcaaaaggggtccttac
ctgatcgtaccctctgctgacctgcaacagcgcagcccaaacaagcctcggctaactctg
tgtgagcatgtcatcattaagagacagaagctttctcacacagagggagacaaaagtgtc
gaggaaaaaaccctgaaagaggacaccactgacatgtga
DBGET
integrated database retrieval system
