Pangasianodon hypophthalmus (striped catfish): 113531980
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Entry
113531980 CDS
T05759
Symbol
cfap54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113531980 (cfap54)
Cilium and associated proteins [BR:
phyp03037
]
Motile cilia and associated proteins
Sperm associated proteins
113531980 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
TPR_1
TPR_2
fn3
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
113531980
NCBI-ProteinID:
XP_026778787
LinkDB
All DBs
Position
Unknown
AA seq
2912 aa
AA seq
DB search
MEPLPASYYGALNQSNPVIAAFEKDLKEFKSYMRRIRDSLTFDHFSYSRGSLKLFDIWRK
YEPRLPGPYYEEHLLDIADFLFENKFYRLALWQGYTRYLQRFSTASLENIRNVEQLKQAF
FPHGFHTAGAKLTLRALYGECLCAFYLERERCKQPDCIGMQKLLSVLAFLRITMQAILPH
ESLCWMVYNGSLYIYSICRFLMSVSHSAQALEYLLWACVCLETSIPLLIPSFLPWRATLY
CSVCECYYDGQAAVQAEVFARRALGKIDELGKLEKLSGFPSSPDTTRAFKDATIKVAVMV
FKRSVYESRRKPKGFFRLKQKASLRDGQNNPWPRTTTERILMELFEGNAAQFLAVLEALW
DSSRRPLQTGTPDDPDIQEVAFELMSAGVSILSGNGGSSDRVRNDSLPLSLNALTPTCTL
MEMAVAGENQISVDAAVKFVKLLFRYEQWDVFCSLSDNLVTVVSSLEGRLFRKAELELTL
LEAMERLMSTQRVRSLGTKDLMAEVQTDKDQSSGLISMTEELLNLVQTLHVCVCEAAQDI
RPDEDLVLDIVLFLWAKCKPVFQRAQARHYDPVCYMAKMAFPEKWVQTLFLLCEVAFMCQ
LADIDPVAVAEMTLRLASVLEGSADSPPLTIPTKDSNEGSILQSTPVEKPTATPTVNSQA
EHLEMVWTVLEKGLECVSRGRTVCLPRDASAISDTVYLQKVSGEHLRSSGDGQIETTSSS
RMRALSMDMHMELLAFQHRVSLKLLDAYPDDENLEGRKRPLTQSAQGQSTAVHSKKARAE
CALHKISKVLFLVQKALLSYKKDATNRGTKKLLEEALALLEKAGVEEKRLVSAAASAEMG
SGVEEGCRPPPLPVLLARSNRSLTFTPAPYVLEEQVCWYRIYGREVEGVNLKVRIGDCHL
VGTGETIPSRGERLFCITGLEPNQKYIFAVAAYDTQGNLIGSSIGDTTRPVLASLPLPLL
TAWAHLAQVAYQTGQYALAKKACSEIWSHFTLPPVADSGACQESVDEEAPEGLAQTKLCP
ETLQLSSPLLQQLFLTSIFMQTDIHIQQRALYCDSLSDGSPLIWGQEARLVECERMLVAI
DLSLHLNDSSAALQAVVSCYGLLAPLIFYQIPSDPVVQVLLKCLMVLQEIPAALKQKRPV
ATTESLYHMVACITHYVAKGLRALKEDCMASSVMEQGKQLLLEMSESLQQHDKIQKHQKK
SVAAQEGEPSEELKALTCSALKQHEKIGTVVNCDKPVRKREGRKPREKGHSVIQSNQAAA
DGFDQDLSGEEKRKILYKVIGSSSLRNAFRTVMKFKQMSCFMEFAALLLQKALQEDQLEL
LIQWGREIFSWIKSRDESLMLPKKPYRKLRKDQKTFTSSVIQYCNKVNRVYKKKNELQKK
ISSSEDCEKEVKPVETMMKQGGSVRRHQRRRVMRQVCSDELPWRCRANLTLAQAHLVLLS
KNLKLHVVTPLELCYSKFSLRFFSLAHTGTLVKWNNISQHTKPPELSPSILKATIHKAKD
TSQGAPDMSGEGSGESEAESELDTPRTQLTSDSEGSKTPETSRRHILFKPLDTINKASVH
LRRAMVLAYRGRLWTSLQWVCEILWDQFNAIAFLVECSPSSETPRTLTLDQFYTVFTPLL
ALASELLMDMMEKLQQWKVYDEEGEELEARPLNDGALVDLKWMRNLVLHTLELLFYQAKW
EKLAHLALLYNFYTREHYTHMITPVLVYAQRRLLERISYFGGPSVPQPHFTYTETVTGEK
VTCRNYAHKQLLLSSSMESWCESTASSAASEPLEVAERKRAMCVVSVPLDIDDTLRCFRE
SLTKKRHTLRAFQHSRTLIMVLLADTQHSIEVPFCKESCHGSQGRVEFNIAASTAPSIGP
PDLSKEDFNSVGSVYSSPLSPSHIQTVLSSYSSSIKYLQANNYNSLQVQALHDLGNLHFY
IGNPKAALSHWSKALDCSLQTTNVLQSWDGDSWGHNSSQQPLRHAGIWGCFQGALLSAKI
AQYILTSNISQRTNCCLLSAKLFKCLLRASLPHPENDLEYASYTLNTELIPGVNIFSESD
QTLVGCTVASLGFLCHWLYTSGHQLSALPLLALYQYVVSKVCRHPHLTAGCRILKVKMLT
ELRLFAEAVKEMHSVSDGEEVPMPHNSYTRAEKASTWKKFSNYKPLTDPCNLEVLEELVN
KRPGEDFMALYGTKLTCRLHLARLQLILAMCSTIHDLPEPFTEVLETQVRSSITPSLRDS
SSDGSPSSPSMTNEEPKDLQLQLQKDTLTPGQVKALLLKEIFSQLNSELFALQHIHTDPE
ELELAVEIRLLLSSLNLQQGKAASSADQAASALRLLQDSPLLQNESIQQLPPRCPSSVLK
QSSTRAEHEQLYEPKADTGPQLGDMPAAVEALERMGRSLWLRCTLAVVQSLTAHIPGTVI
YPGQQEIPKYLPVHYGQILYECRVIMQSEGSAQSLSLSLSLSLSLSLCVCVCVCVCVGVD
SSAEADRLIKQGLAEAEAWGDPDTQALLLLQEVALNTHCGRAPEENASILQEAVSLLSGR
NTLSLHSGLSLAKATLLLSELRGSDGQPLYLLTQKLLQQQLKTLGECGVQKALGGLGLLS
TPAWRNIYHPQLPLLARTTMRLGQCLALQAMVSSSEEDEQRSNLWLLAQEELHSALIISR
ASASRDPQLEADILYLKVAGQCVEEFMSPAGDSNLTLRLTQLHTFFSDHLAAYKEKCVIP
DPPSALILEPQTIQVRHPQQMVSDLHPWATLNTHQLCVQWHRPTLTSSGLAGKTIMLVFA
LNKAPMSDTQPNMPAAADIQAGHRLISTDSLKAIHAQLISVCVEAEVDLSVSASTPSMTT
SVSCTQENEHGSRTPVKASTSTQQQMLLEKTRHICTEIRNLLKPDLKANPITKVPFEPSV
QILCDLERCFNPASGATLEDRALSDWLFSLLT
NT seq
8739 nt
NT seq
+upstream
nt +downstream
nt
atggagcctttacctgcttcatattatggagctttaaatcaatctaaccctgtcattgcc
gcatttgagaaggatttaaaagagtttaaatcgtatatgagaagaattcgtgattctcta
actttcgaccacttttcttattcaagagggtctttgaaactgtttgacatctggaggaaa
tatgaacctcgtctccctggaccttattacgaagagcatctgctggacattgcagatttt
cttttcgagaataaattttacagattggcactgtggcagggatacacacgctacctacag
cggttctccactgctagcttggagaacatcaggaatgtggagcaactcaagcaggccttc
ttcccacatggctttcatactgcaggagcaaagcttacgctccgtgctctgtatggcgaa
tgcttgtgtgctttctacttggaacgcgagaggtgcaagcagccagattgcatcgggatg
cagaaacttcttagcgttctcgcgtttttgcgcatcacgatgcaggccatcctgccccat
gagagcctgtgctggatggtgtacaatggttctttgtacatctatagcatatgtaggttc
ttgatgtccgtgagtcactctgcacaggctctggagtatttactatgggcatgtgtgtgt
ctggagacatccatcccactgctcattcccagtttcctgccctggagagccacactctac
tgcagtgtttgtgaatgttactatgatggccaggctgctgtgcaggcagaggtgtttgct
agacgagctcttggtaaaatagatgaactagggaagctggagaagttgagtgggttccca
tcatcgccggatacaacgcgagcctttaaagacgccaccatcaaagttgcagtcatggtg
tttaaacgctcagtgtatgaatctcggaggaaacctaaaggatttttcaggttgaaacag
aaggccagtctcagggatggccagaataatccatggccacgtacaacaactgagcgcatc
ctgatggagctgtttgagggaaatgctgctcagttcctggcggtgttggaggctctgtgg
gacagttcccgcagacccctgcagactggcacaccggatgaccccgatatacaggaggtg
gcattcgagctcatgtcagctggcgtcagcatactatccggaaatggcggctcctccgat
cgagtccgcaatgacagcctgcctttgtctctgaatgccctcactccgacttgcaccctc
atggagatggcagtagctggggagaatcagatttcagtggatgctgcagtgaagtttgtg
aagctgctgtttagatatgagcagtgggacgtgttttgcagtctttcagacaatcttgtg
acagtagtgtctagcctggaaggtcgtctcttccggaaggctgagttggagcttactctg
ctggaagccatggagcgtctcatgtccactcaaagggttcggtctctggggaccaaagac
ctcatggctgaggttcaaactgataaagaccaatcttcagggctaattagcatgacagaa
gagctcctaaatctggtccagactctgcatgtgtgcgtgtgtgaggcagcccaggatatc
agaccggatgaggacctggtgctggatattgtactgttcctctgggcgaaatgtaagcct
gtgtttcagagagctcaggctagacactatgacccagtatgctacatggccaaaatggct
tttccagaaaagtgggtccagactctgttccttctgtgtgaggtggcctttatgtgtcag
ctggctgatatagacccggtggcagtggctgagatgactcttagactggcctcagtgctg
gagggcagtgcagactcgcctccactgaccatcccaacaaaagactcaaatgaaggcagc
attctgcagtccacgcctgtagagaaacctacagccacgcctactgtgaactcacaagct
gagcatcttgagatggtgtggactgtgctggagaaaggcctggagtgtgtgtcaagaggc
aggactgtatgtctccctcgtgatgcctctgccatctctgacactgtgtacctacagaag
gttagtggagaacatttgagatcttctggggatggacagattgagaccactagcagttca
cgcatgagagctctctcaatggatatgcatatggaactgctggctttccagcacagagta
tccctcaaactcctagacgcctacccagatgatgagaatcttgaggggagaaagaggcca
cttacgcagagtgcacaaggacagtctactgctgtacattcaaagaaagccagagcagaa
tgtgcactgcataaaatctccaaagttttgtttctggtgcagaaggccttactttcctac
aagaaagatgctactaacagaggcaccaaaaagctgcttgaggaagctttggctttactg
gagaaagcaggtgttgaggagaagcggctggtcagtgctgctgcttctgcagagatggga
tcaggagtggaagaagggtgtagacctcctccacttcctgtgctgctggcacgtagcaac
cgatctctaactttcacgccagcaccatacgtgctggaggagcaggtttgctggtaccgt
atttatggtagagaagtcgaaggtgtcaacctgaaagtgcggattggagactgccacctg
gttggcactggtgaaacgattccttctagaggagaacgcttgttttgcataactggcctg
gagcccaaccagaagtatatctttgctgtggcagcctacgacactcagggcaatctgatc
ggaagcagtattggagataccaccaggccggtgctagcttccctccctcttcctctgttg
accgcctgggcacatctggctcaggtggcctaccaaacaggccagtatgcactagcgaag
aaagcctgcagtgagatttggagccactttaccctcccgcccgtcgcagactctggagcc
tgtcaggaatcagtggatgaggaagctcccgaggggctcgcccagacgaaattgtgccca
gagacattgcagctctcatctcctcttctgcagcagcttttcctcacctcaatctttatg
cagacagacatccacatccagcagagagcactgtactgtgactccctcagtgatggaagc
cctttgatctggggacaggaggctagacttgtagagtgtgagaggatgcttgtggccata
gatctgtctctacatctcaatgacagcagtgctgccttgcaggctgtggtgagctgctat
ggcctcctggcacctcttatcttctatcagatcccatcagaccctgtggttcaggtgctg
ttgaagtgtctgatggtgctgcaggagattccagctgcactcaaacagaaaaggcctgtg
gctactactgaatcactgtatcatatggtggcctgcatcacacactatgtagccaagggc
ttgcgagctttgaaagaggactgtatggcatcttcagtgatggaacagggcaagcagctc
ctactggagatgagcgagagtctccagcagcatgacaagatacagaaacaccagaagaag
tcagtggctgcacaggagggtgaacctagtgaggagctgaaggctttgacatgtagtgct
ttgaagcagcatgaaaaaataggaacagttgtaaactgtgataaaccagtcaggaagaga
gaaggtagaaaacccagagagaagggtcattctgtcattcagtcaaatcaggccgcagca
gatggttttgatcaggacctcagtggagaagagaaacgcaaaattctgtacaaggtcatt
ggttccagctccctcaggaatgccttcagaaccgtgatgaagtttaaacagatgtcttgc
ttcatggagtttgctgcactcctgctgcagaaagctttgcaagaggatcagttggaactg
ctaatacagtggggacgagaaatcttcagctggattaagagccgagatgaaagtttgatg
ttgccaaagaagccttacaggaaattaaggaaagatcagaagacgttcacatcatctgtc
atacagtactgtaataaagtaaacagagtttataaaaagaagaatgagttgcagaagaag
atttccagctcagaagactgtgagaaagaggtcaagccggtggagacaatgatgaaacag
gggggttcagtgagaaggcaccagcggcggagggtgatgaggcaggtctgctcagacgag
ttgccctggcgatgccgtgccaacctgacgctggctcaagcacacctggttctgctgagc
aagaacttaaaacttcatgttgtaacacctctcgagctctgttacagcaagttttctctg
cgcttcttctccttggcacatactggaacactggtgaaatggaataatatttcccaacac
accaaacctcctgagttgagcccttcaatcctcaaagccaccattcacaaagccaaggat
accagtcagggagcaccagatatgagtggagaggggtctggggaaagtgaagcggagagt
gagctggacactccacgcacacaactgaccagtgattcagaaggcagtaaaacacctgaa
acttctagacgccacatcctctttaagccactggacacaatcaacaaggcgtcagtacac
ctcaggagagccatggtcttggcctatcgtggaagactttggacatctctgcagtgggtg
tgtgagatcctttgggaccagttcaacgctattgcatttctggtggagtgtagcccgagc
tctgagactcccagaacactgacgctggatcagttctacacagtgttcacacccctgctg
gctctggcttcagagctgctcatggacatgatggagaaactgcagcagtggaaggtgtat
gatgaggaaggtgaagagctggaggccaggcctctgaatgatggagcgctggtagatctg
aagtggatgaggaatttggtgttgcacacactggagctcctcttctaccaggccaaatgg
gaaaaacttgctcatcttgccttgctatacaacttttatacacgggaacattacactcat
atgataacccctgtactggtatatgctcagagaagactgctggaaagaataagctacttt
ggaggcccttcagtccctcagccacacttcacctacacagagacagtcactggagaaaag
gtgacctgtaggaattatgcacacaagcagctgctcttaagttccagtatggagagttgg
tgtgagagtacagcaagcagtgctgcctcagaacctctggaggtggcagagaggaaaaga
gccatgtgtgtggtctctgtaccgctggacattgatgacacactgcgttgtttcagagag
tccctgaccaagaaacgtcacacacttcgtgccttccagcacagccgcacactgatcatg
gttctactagctgacacacagcactcaatagaggtgccattctgtaaggagtcgtgtcat
ggctcacagggcagagtggagtttaacatagcagccagcactgccccatccatcggtcct
ccagacctgtccaaggaagacttcaactctgtgggctctgtgtacagctcgcccctatct
ccctcgcacatccagaccgtcctctcctcctatagcagctctatcaaataccttcaggca
aataattataactcactgcaagttcaagctctgcatgaccttgggaacctgcatttctat
attggaaatccaaaggctgctctctcacattggagcaaggctctggactgctccctgcag
accacaaatgtgctacagtcctgggatggtgattcatggggccataactcctctcaacag
cccctgaggcatgctgggatatggggctgtttccagggtgcattgttgtctgctaagatt
gctcagtatatcttaacatctaatataagccaacgaacaaactgctgccttctctccgca
aagctctttaagtgtctgttgagggcgtccctgcctcatcctgaaaatgatttggaatac
gcttcttacacgctgaatacggagctcatccctggggttaatatcttctcagagtcggac
cagactctcgtcggttgcactgtggccagcctgggctttctgtgtcactggctctacacc
tcaggacatcagctctcagcacttcctcttctggctctttaccaatatgtagtcagcaaa
gtgtgtaggcacccccatctcactgcaggatgcagaatactgaaggtaaagatgttgact
gagctgcgcctgtttgctgaggcagtgaaagagatgcacagtgtcagtgatggagaggaa
gtccccatgcctcacaacagctacactagagcagagaaagcttcgacatggaagaagttc
agtaattataaacctctcacggatccttgtaatcttgaggttctggaggagctggtgaac
aagagacctggtgaagacttcatggctttgtatggaaccaaactgacctgccgactccat
ctggccagacttcagctcatcttggccatgtgtagtacgattcatgacctacctgagcca
tttacagaggttttggagacacaggtgaggagctccattacccccagcctgcgcgactcc
agcagtgacgggtctcccagcagcccctccatgacgaatgaggagcccaaagacctccag
ctccagctccaaaaagacacacttactccaggacaagtcaaggctctgctactgaaagag
atcttcagccagctcaattctgagctatttgcccttcagcacatccatacagaccctgag
gagctggagctggctgtggagatcagactgctgctgtccagtctcaacctgcagcaggga
aaagctgcctccagtgcagatcaagcggcgtctgctctcaggttactgcaggactctccc
ttgctccagaatgagagtatccaacaactgccacccagatgcccttcttctgtgcttaag
cagtccagtaccagagccgaacatgagcagctgtatgagccaaaggcagataccgggcct
cagctaggggacatgcccgctgcagtggaagctttagagcgcatgggtcgctcactatgg
ctccgctgcacactggctgtggtccagagcctcactgctcacatccctggcactgtcatc
tacccaggtcagcaggaaatcccaaaatatttaccagtacattatggccaaattctatat
gagtgtagagtgatcatgcaatctgaagggagtgcacagtctctctctctgtctctctct
ctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggtgtggac
agcagtgcggaggcggacagattgataaaacaaggcctagctgaggctgaggcctgggga
gacccagacactcaggccctgctgctcctgcaggaggttgcgctgaacacacactgtggt
cgagcgccggaggagaacgcctccatactgcaggaggcagtaagtctgctgtctggccgt
aataccctttctctgcattctggtctgtcccttgctaaggccactctgctgctgagtgaa
ctgaggggctcagatggtcagccgctttacttgctcactcagaaactactgcagcagcag
ctgaagacactgggggagtgtggagtgcagaaggcactgggaggactggggctgctctcc
actccagcctggaggaacatttaccacccacagctccctctactggccaggacaactatg
cgcttgggtcagtgtttggccctgcaggccatggtgagctcatcagaagaggatgaacaa
cgctcgaatctgtggttattggctcaggaggagctacattctgcactcatcatctcacgg
gcctcggctagcagggacccccagctggaggctgatatcctgtacctcaaagtggcaggg
cagtgtgtggaggagtttatgtctccagctggtgattcgaatttaactctcagactcact
cagttacacaccttcttcagtgatcacctagcagcttacaaagagaagtgtgttatacct
gatcctccatctgccctcattctggagcctcagactatacaggttcgtcatccccagcag
atggtgtctgacctgcatccatgggccacactgaacacacaccagctctgcgttcagtgg
catcgacccacgctgacaagcagtggactagcaggcaaaacgataatgctggtctttgcg
ctgaataaagcaccgatgtctgacacgcagcccaacatgccggctgccgctgacatacag
gctggacacagacttatctctacagacagtttgaaagcgatccatgcccagctgatctca
gtgtgtgtggaggctgaggtggatctgagtgtgtctgcctctacacccagcatgaccacc
tctgtcagctgcacacaggagaacgaacatggcagcaggacccctgttaaagccagtacc
agcacacagcaacagatgctgctggagaaaaccaggcatatctgtactgagataagaaat
ctgctgaagcctgatttaaaagcaaatcctatcacaaaggtaccttttgagccaagtgta
cagatcttgtgcgacctggagcgctgctttaaccctgcatcaggagccactttggaggac
agagcactaagtgactggctcttctctctcctcacctga
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integrated database retrieval system
