Pangasianodon hypophthalmus (striped catfish): 113531988
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Entry
113531988 CDS
T05759
Symbol
hcfc2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113531988 (hcfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113531988 (hcfc2)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113531988 (hcfc2)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
113531988 (hcfc2)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113531988 (hcfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_FKB95
NANM
fn3
Motif
Other DBs
NCBI-GeneID:
113531988
NCBI-ProteinID:
XP_026778796
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MGSEAPLWKRVQAFTGPVPRARHGHRAAAIRELIVVFGGGNEGIAEDLHVYNTVSRQWFL
PAVRGDIPPGCAAHGLVCEGTRILVFGGMVEFGQYSNSLYELQASRWLWKKLKPRPPKNG
SPPCPRLGHSFTLHGNKCYLFGGLANDSEDSNGNVPRYLDDFYELELQTQSGVKGWIIPE
TKGGGPSPRESHTCVAYSGKSGSSPKLYIFGGMCGNRLADLWQLDIDTMTWSLPKTAGPC
PLPRSQHSSNVIGNQMYVFGGWVPAEKNAVGAEWICTNSMSVLNLDTMMWHGLTPERQRQ
RQSGTAIEEGEEKGHIHWLKARAGHCAVAIGTRLYIWSGRDGYRKCRNYQVCFKDLWYLE
TEKPATPAAVFLVKSTINMLHVAWHPLPAAECYLLQLQYVAPPPASQTQPSDSPTIPTPP
TSLTEGEEPLQRHTQSEPSRGEGDGNYESSALQNTFVIPQERTGSGEARTETTDKQNKLE
FNPVAGINTDESVNRQQTATLRPVTEEANDQNGTKSQQLQEHENLPNPSGQSERADVSAW
FDVGIFKTLFAEVTHYYLPSENRSTDQISSDSEWKMPGPHSFEGREKQELTSNVTYRFRV
AGLNCCGRGDFSPIGEFKTCHPGFPEAPPAVKITKACDSVHITWESPSNASGKIQEYSMY
LAVKKTRGNASEKPGDLTFIRIYRGAKTSCTVNAANLSNAYIDCSARPAIVFRIAAKNER
GYGPATQIRWLQESNKIKSALKPDSSPTNPEPDDIISS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgaggctcctctgtggaagcgcgtgcaggcgtttaccggtccggttcctcgg
gcaagacacggacaccgagcggcggccatccgggagctgatagtggtgtttggaggtgga
aatgaaggaatagcggaggacctgcatgtttataacacagtttccagacagtggtttctt
cccgcagtgagaggggacatcccccctggctgtgccgcacatggtttggtgtgtgaaggc
acacgcattctggtgtttggaggaatggtggaatttggacaatacagcaacagtctctac
gagctgcaggccagtcgctggctgtggaagaagctgaagccgcggccaccaaagaatggt
tcgcctccttgccctcgtctgggacacagcttcactctccatggcaacaagtgctacctg
tttggagggctggccaatgacagtgaagactcaaatggcaacgtgcctcgatatttggat
gatttctatgagctggagctacagacacagtcaggagtcaaaggctggatcatccctgaa
acaaaaggagggggtccatcacccagggaatctcacacgtgtgtggcgtacagcggaaag
agcggcagctccccgaagctttacatttttgggggcatgtgtgggaatagactagcagat
ctgtggcagctggatatcgacactatgacctggtcattacctaaaactgcaggaccctgt
cctttaccgagaagtcaacactcttcaaatgtgattggaaaccagatgtatgtgtttggt
ggctgggttcctgcagagaagaatgctgtaggagcagaatggatctgtactaactctatg
tcagtgctaaacctcgacacaatgatgtggcatggtctgacccctgagcgccagcggcag
cggcagtcaggcacagccatagaggagggggaagagaaaggtcatatccactggctgaaa
gctcgcgcgggtcattgcgctgtggccatcggaacgcgcctgtacatctggagtggacga
gatggctataggaaatgccggaactaccaagtgtgcttcaaagacctgtggtatttggaa
acagagaagccagcgacaccagctgctgtgtttttggtcaagtccactatcaacatgttg
catgtagcctggcaccctttacctgcagccgagtgctacctgcttcagttgcagtacgtt
gctccgcctccagcctcacaaacacagccctctgattcgccaactatcccaaccccaccc
actagtctcacagagggggaggagcctctacagagacatacacagtcagagccgtctcgt
ggagaaggagatggaaactacgagagctcagcactacagaacacctttgtgatcccacag
gagaggactggcagtggtgaagccagaacagagaccacagataaacagaacaaattggag
ttcaatcctgtagctggcatcaacacagatgagtctgtaaataggcagcagacggccact
ttgagacctgtgacagaagaagcgaatgaccagaatgggactaaatctcagcaactgcaa
gaacatgaaaatctacccaacccttcaggacagagtgaaagagctgatgtctctgcatgg
ttcgatgttggtatatttaaaacactctttgctgaggtcacacactactatctaccctct
gagaataggagcactgaccaaatctccagtgacagtgagtggaagatgccaggacctcac
agttttgaaggacgggaaaagcaggagcttacatctaatgttacctaccggttcagagta
gcaggcctaaattgctgtggccgaggagacttcagtcccattggggaatttaagacgtgc
catcctggatttccagaggcacctcctgctgtcaaaatcactaaggcatgtgattcagta
cacatcacatgggagtcgccctccaacgcatcagggaaaattcaggaatattccatgtac
ctggcagtgaagaagacgcgaggaaacgcctcggagaagccgggagatcttacctttata
cgcatttaccgtggtgccaaaacctcatgtacagtgaacgctgcgaatctgagtaacgca
tacatcgactgctcggctcgtcctgccattgtgttccgcatcgccgccaagaacgaacgt
ggctacgggcctgccactcagatccgctggctacaagagagcaataaaatcaaatcagct
ttaaaaccagactccagccctaccaaccctgagccagacgacattattagctcatga
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