Pangasianodon hypophthalmus (striped catfish): 113532020
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Entry
113532020 CDS
T05759
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113532020
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Others
Others
113532020
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113532020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
AAA_13
DUF5798
PKcGMP_CC
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
113532020
NCBI-ProteinID:
XP_026778854
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MYGSARSVGKPEGNQSPGRSPRLPRSPRLGHRRNNSTGGTGGKTLSMENIQSLNAAYATS
GPTYLSDNDATAPASVSDMPKSTMTLGRSGARLPYGTRATVAGSSPNIASDSIAFGDHHV
PAAMASTVPHSLRQARDNTIMDLQAQLKEVLRENELLRKEVDVKESKLSSSMNSIKTFWS
PELKKERALRKDEVSKMAVWKEQYRVMQEETQHLQMTIQALQDELRIQRDLNQLFQQDCS
GARPGEPFSAELTEENFHRLHSEHERQAKELFLLRKTLEEMELRIDTQKQTLNARDESIK
KLLEMLQSKGLSAKASEEEHERTRRLAEAEMHIHHLESLLEQRDKDMSALREDLHRRYEG
APDSAKTKALQTVIEMKDSKISSLERSLRDLEEEVQMLKSNGALSTEEREEEMKQMEVYR
SHSKFMKNKVEQLKEELSQSEAQAEELRKRTAELQRELSAIDQVKQDLSRKDTELLGLQT
KLETLTNQFSDSKQHIDVLKESLTAKEQRAAILQTEVDALRLRLEEKEAMLNKKTKQIQE
MSEEKGTLNGEIHDLKDMLDVKERKVTVLQKKIENLQEQLKDKEKQMSSLKERVKSLQAD
TSNTDTALTTLEEALAEKERIIERLKEQRDRDEREKGEELETSKKELKELKEKISLLQGD
LSDRETSLLDLKEHASSLASSGLKKDSKLKSLEIALEQKKEECIKLESQLKKHTEHISGH
SSNLAQTAAAEAQANTELSERISTLEQEVNRHREDAGRAQAEVDRLLEILREMENEKNDK
DRKISELESLTSRQMKDQSKKVATLKHKEQVEKNRNAQLMEEARKREDNINESSQQIKDS
LRQKDERIEELEEALRESVQITAEREMVLAQEEAARTHAEKQMEELLGAMEKVKQELESM
KAKLSSTQQSLVEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSK
KKKTQEEVALLKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKASSNSDQSNHKPSPDQI
IPPLIDLNQNRSKLKLYIGHLTALCHERDPHILQDLAPPSAYHRSQRDAWEEELQKMSLE
ELESELEQCERESAELQEYANSVLQQIADHCPDILEQVVNALEESC
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtagcgcccgctcagtgggtaaaccggagggcaatcagagccccggacgctct
ccgcgcctgcctcgctctcctcgcctgggccaccggcgcaataacagcacagggggtacg
gggggcaaaacgctctccatggagaacatccagtctctgaacgccgcctacgccacctcc
ggccccacgtacctgagcgacaatgacgcgaccgcccccgcctctgtctcagacatgcca
aagagcactatgaccctgggccgctcgggtgctcggcttccctacggcacgcgcgccaca
gtggcgggtagcagtcccaacatcgccagcgactccattgccttcggggatcaccacgtg
cctgcagccatggcgtccaccgtgccgcactcgctgcgccaggcccgcgacaacaccatc
atggacctgcaggcgcagctgaaagaagttctgcgtgagaacgagctcctgcgcaaggag
gtggacgtcaaggagagcaagctcagctcatccatgaactccatcaagacgttctggagc
cccgagctgaagaaggaacgcgccctgcgcaaggacgaggtctccaagatggctgtgtgg
aaggagcaataccgcgtgatgcaggaggaaacacagcacctccagatgaccatccaggct
ctccaggatgagctgcgcatccagcgtgaccttaaccagctgttccagcaggactgcagc
ggggcgcggccgggggaaccgttctccgccgagctcaccgaggagaacttccaccggctg
cacagcgagcacgaaaggcaagccaaagagctgtttctcctgagaaagactctggaggag
atggagctgcgcatcgacacgcagaaacagacgctcaacgctcgggacgagtccatcaag
aagctgctggagatgctgcaaagcaaaggcctgtcggccaaagccagcgaggaggagcac
gagcgtacgcggcgtctcgccgaggccgagatgcacatccaccatctggagagcctgctg
gagcagagggacaaggatatgagcgcactcagggaggatctccaccgacgctacgaggga
gcgcctgattctgccaagaccaaagccctacagaccgtcatcgagatgaaggactctaag
atcagttctctagagcgcagtctgagggatctggaggaggaggtgcagatgctgaagtcc
aacggagctctaagcacagaggagagagaggaggagatgaagcagatggaggtctatcgc
agtcactccaagttcatgaagaacaaggtagagcagctgaaggaggagctgtctcagagc
gaggcccaggccgaggagctgagaaagcgaacggctgagctgcagcgggagctctctgca
attgaccaggtgaagcaggacctttctaggaaggacacagaacttctgggcctgcagacc
aaactcgagacgctcaccaatcagttctcagacagcaagcagcacatcgacgtcctgaaa
gagtctctaactgccaaagaacagcgagctgccattctacagacagaggtggatgcccta
cgcctgcgtctggaggaaaaggaagccatgctgaataagaagacgaagcagatccaggaa
atgtcagaggagaaaggcacactcaatggagaaatccatgaccttaaagacatgctcgac
gtcaaagagcgcaaagtcactgtgctccaaaaaaagatcgagaacctgcaggagcagctg
aaagataaggagaagcagatgagtagtctgaaagagagggtcaaatccctgcaggctgac
acctctaacaccgatacagctctcactacgctcgaggaggcgctggctgagaaggagcga
attatcgagcggctgaaggagcagagagatcgagatgagagggagaagggagaagagctg
gaaaccagcaagaaagaactaaaggagctgaaagagaaaattagcctgctgcagggagac
ctgtctgaccgtgagacatctttgttggatctgaaggagcacgcctcatcactggcctcc
tcgggtttgaagaaggactccaagctcaagagcctggagattgcacttgagcagaagaaa
gaggagtgtatcaaactggagagtcagctcaagaagcacactgagcacatatcaggccat
tcctccaatcttgctcagacggcagctgcagaggctcaggcgaacacagagctgtcagag
cgcatcagcaccctcgagcaggaggtgaaccgccacagagaggatgctgggagagcccag
gctgaagtggaccgtctgctggagatcctcagagagatggagaacgagaagaacgacaaa
gaccgcaagatcagtgaactggagagtttgacttcaaggcagatgaaagaccagagcaag
aaggtggccactctgaaacacaaggagcaagtggagaagaaccggaatgcacagctgatg
gaggaggctcgcaagcgggaggataatatcaatgaaagctctcagcagatcaaggactct
ctgaggcagaaagatgaacgaatcgaggaactggaagaggcgctacgtgagagtgttcag
atcactgcagagagagagatggtgctggcgcaggaagaggctgcacgcacacatgcagag
aaacagatggaggagctgctaggagcgatggagaaggtgaagcaggagctggagtctatg
aaggccaagctttcgtccacgcagcagtccctggtggagaaggaggcccacctgaccaca
ctgagagccgagcgcaggaagcacctggaggaggttctggagatgaaacaggaggcgcta
ctggcagccatcagcgagaaagacgccaacatcgcactcctggagctgtcctcctctaaa
aagaagaagactcaggaagaagtggctctgctgaagagggagaaagacagattggtgcag
cagctcaaacagcagacgcagaaccggatgaaactgatggctgataattatgaggatgac
catctgaaggcttcttcaaattcagaccagagtaatcacaaaccctctccagatcagatt
attccccctctcatagacctcaatcagaaccgcagtaagctgaaattgtacattggccat
ctcacagccctttgtcatgagagagacccccacatcctgcaggacctggctccaccctca
gcttaccaccgcagccagagggacgcctgggaggaagagctacaaaagatgagcctggag
gagctggaatcggagctggagcagtgtgagcgagagagcgctgagctgcaggagtatgcc
aactcggtcctgcagcagatcgcagaccactgccccgacatcctggagcaggtcgtcaac
gcactggaggagtcgtgctga
DBGET
integrated database retrieval system
