Pangasianodon hypophthalmus (striped catfish): 113532023
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Entry
113532023 CDS
T05759
Symbol
stab2
Name
(RefSeq) stabilin-2 isoform X1
KO
K19013
stabilin-2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113532023 (stab2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113532023 (stab2)
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Hyaluronan
Cell surface receptors
113532023 (stab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
EGF_Teneurin
EGF_TEN
EGF_MSP1_1
cEGF
EGF
FXa_inhibition
EGF_2
Motif
Other DBs
NCBI-GeneID:
113532023
NCBI-ProteinID:
XP_026778865
LinkDB
All DBs
Position
Unknown
AA seq
2548 aa
AA seq
DB search
MEFRMNSVYGSGTLLLLILVVTEIQSTAVQNRCDRKTQVMTKSACHLCSVSQLMNCPAGY
SKKTSGKGQQDCRYHIKTSSTFALSLRGCSHECFKDVMEERCCLGYWGYDCLECPGSAAT
PCSNNGVCSDGIGGSGNCTCKAGFVGTACEKCEENRYGPTCSNVCTCKHGLCNSGLRGNG
QCTCFSGYTGPDCDQELPGCAALKCGPDARCFEDTTSGKLVCKCQPGYFGDGVQCTSINP
CQKRVCHEHAVCVHTGPNQHTCTCTEGYQGDGLVCLPIDPCQTDYGGCQSNSSRCVYDGP
GKAHCECLEGFEKLVMGVGCSLRDVCKPDSCHKNAYCTTVAPETVECKCQDGFLGNGKVC
FGNIIHRLQELNTDPTSRSYGQLSSAISLFEGALSWPLTSLGPFTVFVPKNRAFKSTQPV
KTLLADQAKARYLVKMHMIPGEVNSDTLKNGILYYTLTGKPAESISESGQVKVRIHGSRK
KAALLESDIISSNGMIHITDKLLDTVPSTVISDSQENLMKILQDNGKFSIFKSLIEKTNM
VDILDKEGPYTLFAPTNTAFTLMKDNELNYLKSEEGKPKLLEFLRNHVVASAQLKASYIV
SISQTVSMANQVLTINVTAAGQILVSGVAVAEADVEAKNGCLYSLVDVLIPPSIEPILPH
RCDLTESNVYKSPCVSCTSVSRATCPTGVSLNTTSTGCVYMKRTFGMDAPVLGCSLFCNE
TRTTPQCCKGFYGPDCSPCPSGFSAPCSSHGKCLDGIEGNGTCQCEPNFKGWRCQYCADP
NKYGPFCNQTCRCVRGVCDNRPEANGACKPHSCQQGITGELCDKHALPCGPSQTCHIHAN
CILEREGEEHCVCKPGYMGDGLQCVHEDPCTWSPNGGCSYNARCVQLGLGRHKCECLSGW
KEDGDECQPVNNCLEPSRGGCHPNASCVYVGPGQNECVCTRNFRGTGRDCEPVNQCVNLM
GGCHQLASCVMMYPGRFECVCQTGYTGDGRICYGSLAQELQSNLDLSGFNTWVTRADLMQ
MMFEKQNITLFVPSLAAINAMSKEDQDFWLSSSNVQSLVMGHVVSGLYRLSDLRTYPFPQ
LVSVLRGTLPVSWTNETTMVARSTITSGDIVAKNGLIHLIDKVLISERKLSTGLLGVLDK
TPQFSLFKNALMTYNLSTEIEEASGFTVFAPTDSAIREYLKSTGQDSLDVNVTQYHIVLD
ETLLQGDLQDGLYKDTMLGFSYQLGIFRNDSNWFVNKAQMNATDIETDKGVIHGLSAVLK
IPKNRCDTASSRYFWGRCMDCFRPPESRCPTGTKQLKLSPRRCLFSIRKYGRFVGCSASC
EKRTIVRKCCEGFYGTYCETCPGPEGQPCFGNGVCMDGINGTGVCQCNPGFNGTACENCQ
PGKYGIHCDQDCKCVNGRCNDGLEGDGNCQCDVGWRGIYCSIAITSDMCGGKCHTSANCL
LKIPDNSYYCSCAAGYEGNGTRCTVVDACAKNNGGCSPNAVCKRTLPGRRQCVCNPGHAG
DGQVCVSINPCLDASGGCGNNSECIHTGPNKSACVCLPGHSGNGKTCSPINMCRKKNGGC
HQFAKCTMTGPGERNCTCPIDYIGDGINCKARLIQELRARGLTDFYFSLQRADVYYLQSR
GPYTVFAPNNNAFHKLENQQMVNNVKNAAILMYHIVPCRSLLPEDLQQPRNLTTLTGEIL
TISYSEGTIQINNNAKVVYSDQESSNGIFYEIDTVLTPPSYQKMEEMDKPNSALKDVADQ
HGFKTFYKLLEDTEVIKQIQDRLHQPVTLFLPTDSTMAALPQAQKDFLYALHNRAQLVEY
LEYHILRDKKLHAAEVTHFDSLKTLQGSDISVSCVGEDHIGALYINDKNCRIVKRNLKFN
EGLVYGIDCLLTPPSLGGRCDKKDIVDITMPCRYCSLTIVSDCPAVSKPKTTQKCDFPRR
FLSVNSGCQSVCSMVVWKPKCCPGYYGRDCLACPGGPGSPCSNHGRCDDDHLGNGTCTCD
TGFQGVACELCTEGHFGPDCKACNCTEHGTCNEGREGTGSCFCDEGWTGPQCEHKLADGP
LCLPACHKKAVCTKNNTCVCKPFYEGDGITCTVMDMCQFWNGGCSKNAKCTQKGEKVNCT
CLKGFSGDGYVCLPVDPCVEDDNGGCNEHAICTMTGPGKRKCECKTNYVGDGLACELKVL
PVNRCMVDNGQCHTDAQCTDLHYEDKTVGVFHYRSPLGVYKLNYTEAEEACKQAGGTIAT
YTQLSYAQQAGYTMCSAGWLAQNRVAYPMSYSNPKCGFGHVGIVDYGTQTDLSKTWDTFC
YRIKDVKCECKIGYIGDGYSCIGNILQVLTTKPNFSNFLSQILNYSRAGVKGQEFMKRLS
NITTQSTLFVPDNNGLYENQTLSYRDLEHHLLDGRALVLQALINISHVKSHLGHTLNVKR
VPSLQNPQTEASSGYVNDRYIIESDILASNGIIHVLQGPLKAPPPPPSSLPQAHTAGMGI
GVILLVILIVSAAFVAYHFYNRQTKPFQFHYFREDEKEDSSSPESTPYISNPMYETTAAP
SAPDLPVEDKDDKHQVVDGGSYDLLQDS
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagaatgaactctgtctatggaagtggaacgctcctcctgctgatccttgtg
gtaacagagatacagtctactgctgtacagaaccgctgtgacaggaaaacacaagtgatg
acaaagtcagcgtgccatttgtgctccgtaagtcaattaatgaactgtccagcaggctat
agcaagaagacatccggcaaggggcagcaggactgcaggtatcatataaaaacctcatcc
acatttgctctctccctccgtggctgctcacatgaatgtttcaaagatgtgatggaagaa
cggtgctgtttagggtactggggctacgactgtctcgagtgtccagggtcagcagctact
ccatgcagtaataacggggtttgctctgatggcatcgggggctccgggaattgcacttgt
aaagcaggatttgtgggaacagcgtgtgagaaatgtgaagagaaccgatacggacccaca
tgcagcaatgtttgcacctgtaagcacggcctctgtaacagtggactgagagggaatgga
cagtgcacctgtttttcaggatacacagggccagactgtgaccaggagctcccgggttgt
gctgctctgaaatgtggtcctgatgcacgctgttttgaagacaccacttctggaaaactg
gtgtgcaaatgccaacctggttactttggtgatggagttcagtgtacctcgattaatcca
tgtcagaagcgtgtgtgtcacgagcatgcggtgtgtgtgcacactgggccgaaccaacac
acatgcacatgtacagaaggctatcagggagacgggctggtgtgtctgcccattgatccc
tgccaaactgactacggcggctgccaaagcaactcctcgcgatgtgtgtatgatggacct
gggaaggctcactgtgaatgtctagaagggtttgagaagttagtcatgggcgtgggctgc
agtctgagagatgtgtgtaaaccagactcctgccataagaatgcttactgcaccacagtg
gcaccagaaacagtggagtgtaaatgtcaagatggtttccttggcaatgggaaagtctgc
tttggcaacataatccatcgtctgcaagaactaaacactgaccctacgagccgctcatac
ggtcagctctctagtgccatcagcctgtttgagggtgcattgtcctggcctctgacctca
cttggaccattcactgtgttcgtgccaaagaacagggctttcaaatcaacacaacctgtg
aaaactctgctggcagatcaggcgaaggctcgctatctcgtaaagatgcacatgatccct
ggagaagtgaactctgatacactgaagaacggaatcctctattacactctgactgggaaa
ccagctgagtcaataagtgagtcagggcaggtgaaggtccgcatccatggcagtcgtaaa
aaagccgcgctgttggagtcggatattatctcttcaaatgggatgatccacataactgac
aaactcctggacacagtcccttctactgtaataagcgacagtcaggaaaacctgatgaaa
attctgcaagacaacggcaagttctccatatttaagtctttaatcgagaaaaccaacatg
gtggacattttggataaggagggcccctatacgctgtttgctcccacaaatacggcattt
actttaatgaaggacaacgagctaaactaccttaaatctgaggagggtaaaccaaaacta
ctggaatttctgcgaaaccatgttgtagcctcagcccagctgaaagccagttacatcgta
tccatctcacaaaccgtatccatggctaatcaagtcctgacaattaatgtgacagctgcg
ggtcaaatcctggtcagtggggtagcagtagctgaggcagatgttgaggcaaagaacgga
tgtctgtattcactggtagatgttttaatcccaccatccatagagcccattcttcctcat
cgatgtgacttgacggaaagtaacgtttataagagtccatgtgtcagctgtacgtcagtc
tccagggctacctgcccaaccggcgtctcactgaacacaacttccacaggctgtgtgtac
atgaagagaactttcggcatggacgctcctgttctaggctgcagtctgttctgcaacgag
acccgtactacccctcagtgctgtaaaggcttctatggtccagactgttctccgtgtcct
agcggtttcagtgccccatgctcatctcatggcaagtgtttggatggtatagaaggcaac
ggcacgtgtcagtgtgagcccaacttcaaagggtggcgatgccagtattgcgccgacccc
aacaaatacggccctttctgcaaccagacctgtcggtgtgtacgtggtgtttgtgacaat
cggcctgaagcaaacggagcgtgtaaaccacactcctgtcagcaaggcatcacgggagag
ctgtgtgataaacatgcacttccctgtgggccgagccaaacatgccatatccacgccaac
tgcatcctggaacgagaaggggaggaacactgtgtctgtaagcctggttacatgggcgat
ggattgcagtgtgtgcatgaagacccgtgtacatggagtccgaatgggggctgcagttac
aatgcgagatgtgtacagctgggattgggaagacacaagtgtgagtgtctgagtgggtgg
aaagaggatggagatgagtgtcagcctgttaataactgtttggagccgtccagaggaggg
tgtcaccctaacgcctcctgtgtctatgtgggtcctgggcagaatgaatgtgtttgcacg
agaaatttccgtggcactgggagagattgtgagcctgtaaatcagtgtgtaaacctgatg
ggaggatgccatcaattggccagttgtgtgatgatgtatcctggaaggtttgagtgtgtg
tgtcaaaccggctacacaggagatggaagaatttgctatggatctctggcacaggaactg
caaagcaatcttgacctgagtggattcaatacatgggtcactagagcagatctcatgcag
atgatgtttgagaagcagaacatcactcttttcgtgccctcattagcagccatcaacgcc
atgagcaaagaagatcaggatttctggctgtccagcagcaacgttcaaagtctggtcatg
ggccatgtggtgtctgggctttatagattatcagacctgcgtacctacccctttccacaa
ctggtttctgttttaagaggaacacttcctgtttcctggaccaatgagaccacaatggtt
gccaggtctactattacatcaggagacatagtcgccaagaatggactcattcatctgatt
gataaagtcctaatctctgaacgtaaactgagtactggtttactcggggtgctggacaag
acaccacagttctctctcttcaagaatgctcttatgacatacaacctgagtacagagata
gaggaggcctctggctttacagtttttgcccctacagacagcgccatcagagaatacctg
aagagtacaggccaggattcactggatgtgaatgtgacgcagtaccacatcgtcctggat
gagactctgttgcagggcgacttgcaggacggtctgtataaagacactatgctgggattc
tcctatcagctgggtatattccgcaatgacagcaattggtttgtaaacaaggcacagatg
aatgctacagatattgagactgataaaggagtgatccatggattgtccgctgtcctgaag
attcctaaaaaccgctgtgacacagcctccagcagatatttttggggaaggtgtatggac
tgcttccgtccacccgagagtcgctgtccaactggaacaaagcaactgaagttgtcacca
aggagatgtttgttcagtataaggaaatatgggcggttcgtcggctgctcggcctcctgt
gaaaaacgcaccattgtaaggaagtgctgtgagggattttatggcacttactgtgagact
tgtccagggcctgaaggccagccatgttttggtaatggtgtgtgtatggatggtatcaac
ggcactggtgtgtgtcaatgcaaccctggctttaatggcacagcctgcgagaactgccaa
cctggcaaatatggcatccactgtgatcaagactgtaagtgtgtaaatggtcgttgtaat
gatggtctggagggagacggtaactgtcagtgtgatgtgggatggagaggaatctactgc
tccatagccattacctcagacatgtgcggagggaagtgccacaccagtgcaaattgcctg
cttaaaataccggataattcctattactgtagctgtgcagctggttatgaggggaacggt
acacgctgcacagttgtggatgcttgtgcaaagaataatggaggctgctctcccaatgct
gtatgtaagaggactctcccaggacgcaggcaatgtgtgtgtaatcccggccatgcaggg
gatggacaagtgtgtgtgtcaatcaatccatgtctggatgccagtggaggctgtggtaat
aattcagagtgcatacacacaggaccaaacaagtcagcatgtgtgtgcctgccaggccac
tctggaaatggaaagacatgttctcctatcaatatgtgtagaaagaaaaatggaggatgc
caccaatttgccaaatgtacgatgacaggcccgggagagaggaactgtacttgcccaata
gattacattggagatgggataaactgcaaagccagactcatacaggagcttcgagcgaga
ggtctgactgacttctacttcagtttgcaaagagctgatgtctattatcttcaaagccga
ggcccatacactgtgtttgctcctaataataatgcatttcacaaactggagaatcaacag
atggtaaataacgtgaaaaatgctgcgatcctgatgtaccacatagtgccatgccggagc
cttctcccagaagatctgcagcaacctcgtaacctcaccacactcactggtgaaatcctc
accatttcgtattctgagggtacgatacaaatcaataacaatgccaaagtggtgtacagc
gatcaagaaagtagcaacgggattttctacgaaattgacactgttctgactccacccagt
tatcagaagatggaagagatggacaaaccaaattctgccctcaaagatgtagctgatcaa
catgggttcaagactttctacaaactgctggaagatacagaggtgataaaacaaatacag
gaccgtctccaccagccggtcacgttgttcctgccgacagactccaccatggcggcttta
cctcaagcacaaaaggactttctgtatgccctgcataaccgagctcaactggtggagtat
ctcgagtaccacatcctccgagacaaaaagttgcatgctgcagaggtgacgcattttgat
tcactcaagactcttcaaggctctgatatttctgtgagctgtgttggagaagaccacata
ggggcactgtatatcaacgataagaactgtcgaattgtaaagaggaatctgaagttcaac
gaaggccttgtttatggtattgattgtttgctaacaccacccagcctgggaggacgctgt
gataagaaggacattgtagacattactatgccctgcagatattgctctctcacaattgta
tctgattgccctgcagtatccaaaccaaagactacacagaagtgtgactttccaagacgc
ttcttgtctgtgaactctggatgccagtctgtgtgctccatggttgtatggaaacccaag
tgctgcccaggctactatggcagggactgtctcgcctgtcctggagggcctggatctccg
tgcagtaaccatgggcggtgtgatgatgatcatttaggaaacggcacctgcacatgtgat
acagggtttcagggcgtggcctgtgaactgtgcactgaaggccactttggacctgactgc
aaagcctgtaactgcacagagcatggaacatgtaatgaggggcgagaaggaacaggctcc
tgtttctgtgacgagggctggactggtccacaatgtgaacataaattagctgatggtcct
ttgtgtttacctgcatgccacaagaaggcagtgtgtaccaagaacaacacctgtgtgtgt
aagccgttctacgagggagatggaatcacttgtacagtaatggatatgtgccagttctgg
aatggcggctgctcaaaaaatgccaaatgcacccagaaaggagagaaagtaaactgcaca
tgtctgaaaggcttttcaggagatggatatgtctgtttgccggtggacccgtgtgtcgaa
gatgacaatggaggctgcaatgagcatgccatctgcaccatgactggacctgggaaaaga
aagtgtgagtgtaaaactaactatgttggagatgggctggcatgtgaactgaaggtgctt
ccagtgaaccgttgtatggtggataatggccaatgtcatacagacgcacagtgcactgac
ctgcactatgaggataagactgttggtgtcttccactaccgttctccgctgggggtatac
aagctgaactacacagaggctgaagaggcctgtaagcaggcaggaggcaccattgctacc
tatacacagctctcatatgcacagcaggctggatataccatgtgttcagccgggtggctt
gcacagaaccgggtagcttatcccatgagctactccaaccctaaatgtggatttggccat
gtgggcatagtggactatggcactcagacagatctaagtaagacctgggacacattctgt
taccggataaaagatgtaaagtgtgagtgtaagattggctacattggtgatggatactct
tgcattggcaacatcctgcaggttctcacaaccaagcccaacttttccaactttctttca
caaatcttgaattattccagagctggagtaaaagggcaagagtttatgaagcgcctcagc
aatataaccacacagtccaccctatttgtgcctgataacaatggcctctatgagaaccag
acactatcctacagagatttagagcaccacctgctggatgggagagctctagtgctgcag
gctctcattaacatcagtcatgttaaatcacatctaggacacaccctgaatgtgaaacgg
gttcctagtctccaaaacccccaaacagaggcttcttccggatatgtcaatgaccgttac
atcatcgaatcggacattcttgcatccaatgggatcatccatgtgctgcagggaccactg
aaagccccgcctcctccaccctcgtcccttcctcaggcacatacagcaggaatggggatc
ggtgtcatattgctagtaattcttattgtctctgcagcattcgtggcctatcacttctac
aaccgccaaaccaagccattccagttccactactttagggaggatgagaaggaagattca
agctcacctgagtctacaccatatatcagtaaccccatgtatgagactacagctgcccct
agtgccccagacctccctgtggaagacaaggatgacaagcaccaggtagttgatggaggc
tcgtatgacctgctccaggatagctga
DBGET
integrated database retrieval system
