KEGG   Pangasianodon hypophthalmus (striped catfish): 113532068
Entry
113532068         CDS       T05759                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113532068
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113532068
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 F5_F8_type_C AlkA_N
Other DBs
NCBI-GeneID: 113532068
NCBI-ProteinID: XP_026778999
LinkDB
Position
Unknown
AA seq 1772 aa
MWILHCAMILAFGSAVQAQLLPEANNMCSEGSCYPATGDLLIGRAHRLTASSTCGLHSPE
PFCIVSNLEAEKCFECDSRSLYNEVTHPNSHTIDNVVTTFTPNRLVTWWQSENGVENVTI
QLDLEAEFHFTHIIMTFKTFRPAAMVIERSSDYGQSWQVYRYFAFNCSASFPHISQGPVK
SVDDVICDSRYSNIEPSAEGEVIFRALDPVFKIPDPYSQRIQNLLRITNLRVRMVKLHTL
GDDLLDGRNEVKQKYYYALYDMVVRGNCFCYGHASECAPVDESEAGPEGMVHGHCMCNHR
TAGLNCEKCQDLYQDAPWRPAEGRNANECKRCECNQHSYVCHFDMAMYVSSGNVSGGVCD
DCQHHTQGQHCEGCKPFYYQHPNRDIRDPRICEPCDCDLRGSLNGGVCDSVTDVMRGLVA
GQCRCKQNVEGERCDHCKQGYYGLGQDLLGCLPCSCNPLGTLPGGRPCDTDTGMCYCKRL
VTGRNCNQCQPQHWGLSTDKDGCRPCDCDLGGALNNDCSPQTGQCVCREHMSGRRCDNMK
PGYYFAALDHYTYEAEEAAFEPAVTVVARPLPADRPPTWTGIGFASVPERETLQFTIDNI
PQSMEYELLIRYEPQLPDVWEQVKIDVIRTGRPSPSAHCSAPYADQQTISLPPGSRYVVL
PRPLCLEKGQKYTVKMILALFSSNDLHHQPHMLIDSIVLLPVVRDLELFSGAADREAAWE
MFQKYRCLENSKSVQKTPMTTICREYIFSASALLHQGAMECECDPLGSLSTVCESNGGQC
PCRPNVVGRKCDSCAPGTLQLGPSGCRPCECDPLGSKNTFCNSTTGQCLCLPGVYGRQCA
HCLPGHWGFPQCQPCFCNGHGEHCHLHTGQCLECRDHTTGDQCERCKKGYHGNALLGSSD
RCRPCMCPDGPGSGRQFADTCYQNPNSLQLFCVCSQGYKGPRCEECAPGYYGNPKVSGGR
CYPCQCNGNIDVHDPMSCDARTGTCLRCLHNTEGQACQHCRCGYYGDASTQNCQKCMCQL
LGTDNHKCVDGECECDQVSGQCPCLPSVEGLHCDRCAPNTWNFHGGKGCQPCQCHPTHSY
SLSCNGMSGQCSCMPGFGGRTCEECRELFWGDPEVKCYACDCDPRGTSTPQCNKLTGACV
CVEGVAGQRCDSCGRGYVGTFPDCQPCHQCFREWDVTVGELTNQTQQLVDTVENLKVTGV
TAAYQDTIDSLEGGAKQLTQILEDDKAQQTLRYSQELLQQAKRIKSDLDRSLNRSEVDVQ
QVSEEHGRVAEEIRSLSLETQKQQESITNTQQQVLRIKHSDPAGAVDSIKEYYQQSVEAE
SRVNQATTEPHSPVEQSAGLRQATEAKLDAVKGEFELKQSLDSKLLSTLNQELEQDDFSQ
LSQQVCGGEWSRDGCGACGGLGCVGEDEEPQCGGQDCKGVITETNNAWKKAKDLDKDIMD
SLKEVEKLQRMVSAAQGRADESKVRAQDILLKANQSKARVEQTNQELRELIQQIRDFLTS
GADLERIEALSDEVLKLKMPVVAGELKNVTREIQQHVASLTGVDDVLAQTSEQAQTAERL
LQQAHVISEEATQVGEEVDKVKVALNESEHAQSAAEDSLKAAKSDIDYTQQQITTVDSET
VAAEFMLSNATQRLLDLERNVGVVRQKTQENSDSAELAQNKAEYISENTEQTKRTLDLEV
QPKFQTAHGLMEEKAAGVSDARQRAEQLQQEAKNLVTDANSKLQNLKELERTFSVNQRTL
VEKAQEVEELEKQAQAVLQELSQRVTVYSTCL
NT seq 5319 nt   +upstreamnt  +downstreamnt
atgtggattttacactgtgccatgattctggcatttggttcggctgtccaggcacagctt
cttcctgaggccaacaatatgtgttcagagggaagctgttaccctgccacaggcgatctg
ctgatcggcagagctcatcgccttacagcctcatccacctgcggactccactctcccgaa
cccttctgcatcgtcagcaacctagaggctgagaagtgttttgagtgtgactctcggagt
ctctacaacgaggtcacacaccccaacagccacaccatcgacaacgtggtcacaaccttt
actcccaaccgtctcgtaacatggtggcagtctgagaatggagtggagaatgtgaccatt
caactggacttagaagctgaattccacttcacacatatcatcatgacctttaagacgttt
cgtcctgcagcaatggtgattgagcgttcatcagattatgggcagagctggcaggtgtac
cgttactttgcattcaactgctcagcttcttttccacacatctcccagggaccagtcaag
agtgtcgatgatgtcatctgtgattcccggtactctaacattgagccttcagcagaggga
gaggtgattttccgagcacttgatcctgtatttaagattcctgacccctacagccaacga
atccagaacctcttgagaataactaacctgcgagtgcggatggtgaagttacacactctc
ggtgatgaccttctggatggccgaaatgaggtgaagcagaagtattactatgctctctac
gacatggttgtccgtggcaactgtttctgttatggccacgcctccgagtgtgcaccagtg
gatgagagtgaggcagggcctgaaggcatggttcatggccattgcatgtgtaatcatcgc
acagctggattgaactgtgagaagtgtcaagacttatatcaagatgcaccatggagacct
gcagaaggtcgaaatgccaatgagtgcaagcgctgtgagtgtaaccagcactcgtatgtg
tgtcacttcgacatggcgatgtatgtgtcgtcggggaacgtgagtggaggagtgtgtgat
gattgtcaacaccacacacaggggcagcactgtgagggttgcaagcctttctactaccag
catcctaacagggacataagagaccctcgcatctgtgaaccatgtgactgtgacttacgg
ggctcactgaatggtggtgtgtgtgacagcgtgacagacgtgatgaggggacttgtcgct
ggtcagtgtcgctgtaagcagaatgtggagggagagcgctgtgatcactgcaaacaagga
tactacggacttggccaagacctgctaggctgcctcccatgcagctgtaatcctctgggc
actcttcctggaggaaggccctgtgacacagatacaggaatgtgttattgcaaacgcctc
gtcaccggacgaaactgtaaccagtgtcagcctcagcactggggcctcagcacagataag
gatggctgtcggccatgtgactgcgatcttggaggagccctgaacaatgattgttctcca
cagacagggcagtgtgtgtgtagagagcacatgtctggcaggcgctgtgacaacatgaag
cctggttattattttgctgcccttgaccactacacttatgaggcagaggaagcagcattc
gaaccggcagtgactgtggtggcgaggcctctgcctgcagatcggcccccgacctggact
ggaattggattcgccagtgtacctgaaagagaaacactgcagttcaccattgacaacatc
ccacagtctatggaatatgaattattgatccgctatgaacctcagttgccagatgtgtgg
gagcaggtgaagatagatgtgatacgtactggtcgtccttccccatctgcacactgttca
gctccttacgctgaccaacagaccatctcacttcctccaggctccaggtatgtggtactg
cccaggccactgtgtttggaaaagggccagaaatacacagtgaaaatgattctagcactt
ttttcatcaaatgatcttcatcaccagccgcatatgctgattgactctattgtgctgttg
cctgtggtgcgagatctggagctgttctcaggggcagctgacagagaggcagcgtgggaa
atgtttcagaaataccgctgtctcgagaacagtaagagtgtccagaaaacacccatgacc
accatctgcagagaatacatcttcagcgcatcggccctgctgcaccagggagctatggaa
tgtgagtgtgacccactaggctctctcagtacggtgtgtgaatctaatggtggccagtgc
ccgtgcaggccaaatgtggtgggcaggaagtgtgacagctgtgccccgggtaccctccag
cttggaccctccggctgcaggccatgtgagtgtgacccgttgggctcaaagaacactttc
tgcaattcgaccacaggccagtgcttgtgtttacctggtgtttacggacgtcagtgtgcc
cactgtctgcccggacactggggcttcccacagtgccaaccctgcttctgtaatgggcac
ggagaacactgtcaccttcacacaggccagtgcttggagtgcagagaccacaccacagga
gatcagtgtgagaggtgcaagaaaggttaccatggcaatgcgttactaggcagcagcgac
cgctgtcgaccctgtatgtgtcccgatggtcctggcagtggaagacagtttgcagacacc
tgctaccaaaaccccaactcactccagctcttctgtgtgtgcagccaaggatacaaagga
ccaaggtgtgaggaatgtgcacctggttactatggcaacccgaaggtgtcaggtggacgg
tgctacccatgccagtgtaacggcaacattgacgtgcatgacccgatgtcctgtgatgcc
cgcacgggcacttgtctcaggtgcctgcacaacactgagggccaggcgtgtcagcactgt
cgctgtggctactatggagatgctagcacccaaaactgccagaagtgtatgtgccagctt
ttgggcactgacaaccacaagtgtgtagatggtgagtgtgagtgtgaccaggtgagtggg
cagtgcccgtgtctacccagtgtagagggtctgcactgtgaccgctgtgccccaaacacc
tggaacttccacggtggcaaaggctgccagccatgtcaatgtcatcccacacactcttac
agcctgtcctgcaacgggatgtctggtcagtgctcctgtatgccaggttttggtggcagg
acctgtgaggagtgtagagagctgttctggggtgatccagaagtcaagtgttatgcatgc
gactgtgacccccggggcacctctacaccacagtgtaacaagttgacgggagcatgtgtg
tgtgtggagggcgtcgccggtcagcggtgtgactcctgtgggcggggctatgtgggaact
ttcccagactgccagccatgtcatcagtgcttccgtgaatgggatgtcactgtgggcgag
ctgaccaatcagacgcagcagttggtggacactgtggaaaacctgaaagttacaggcgtg
acagcagcctatcaggacacgatagacagtctggaaggcggagccaagcagctcactcaa
atactagaggatgacaaggctcagcaaactcttagatactctcaagagcttctgcagcag
gccaagaggatcaagtctgatctggaccgatctctgaaccgctcggaggtggatgtacag
caggtctctgaggaacacggcagggttgctgaggagatcagatcactcagtctggagact
cagaagcagcaagaaagcattactaacacacagcaacaggtgctgcgcatcaaacactcc
gacccagcgggtgcagtagacagcattaaggaatattaccagcagtcagtggaggcggag
agccgagtcaatcaggccaccacagagccgcacagcccagtggagcagtcagctggtcta
cggcaagccacagaggccaaactggatgctgtgaagggagagtttgagctcaaacaatcg
ctggactctaaattactgagcacactgaaccaggagctggagcaagatgacttttcacaa
ctcagccagcaggtgtgtggtggagagtggagccgagatggctgtggagcatgtggaggt
ttggggtgtgtgggtgaggacgaagagcctcagtgtggaggacaggactgtaaaggtgtg
attactgaaaccaacaatgcatggaaaaaagctaaagacctggacaaggacatcatggac
tcgctaaaagaagtggaaaagcttcaaaggatggtttctgctgctcaaggacgtgcagat
gagagtaaagtcagagcacaggatatcctgttgaaggccaatcagagcaaagcaagagtt
gagcagaccaaccaggagctacgagagctcattcagcaaatacgagactttcttacaagt
ggagcagatctggagcgtattgaagcactatctgatgaagttttgaagttgaagatgccg
gtggttgccggcgagctgaagaatgtgactagagagatccagcagcacgtggccagtctg
accggtgtggacgatgtcctggctcaaacttctgaacaggcacaaacagctgagagactg
ctacaacaggcacacgtcatcagtgaggaagctacacaagtgggggaggaagtggacaag
gtgaaggtggcactaaatgaatctgagcacgctcaatctgcagcagaagacagcttgaaa
gcagccaagagtgacattgactacacacaacaacagataaccactgtggactcagagacg
gtcgcagctgagttcatgctgagtaacgccactcagcggttgctggatcttgagaggaac
gtgggtgtggtgcgacaaaagactcaggagaactctgacagtgcagaacttgctcaaaac
aaggccgagtacatctctgagaacacggagcaaaccaaacggacactggatttagaggtg
cagcctaagttccagacagcccatggcctgatggaggagaaagcagcaggtgtgtctgat
gcacgccagagagcagaacaactgcagcaggaggcaaagaatttagtgactgatgccaac
agcaaattacagaatctaaaagagctggagcggacattctcagtgaatcagagaactctg
gtagagaaagcacaggaggtggaggagctggagaaacaagcacaggccgtgctacaggag
ctcagccagagagtcacagtatacagcacctgtctgtga

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