KEGG   Pangasianodon hypophthalmus (striped catfish): 113532166
Entry
113532166         CDS       T05759                                 
Symbol
kdm4a
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113532166 (kdm4a)
Enzymes [BR:phyp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     113532166 (kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     113532166 (kdm4a)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113532166 (kdm4a)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5 DUF4537
Other DBs
NCBI-GeneID: 113532166
NCBI-ProteinID: XP_026779174
LinkDB
Position
Unknown
AA seq 1982 aa
MASDSVAQAPGSRIMTFHPTKEEFKDFNRYIAYMESKGAHLAGMAKVVPPKDWKPRRTYD
DIDDLVIPAPIQQVVTGQSGLFTQYNIQKKPMTVREFRKIANTDRFCNPRYVDLDELERK
YWKNLTFNPPLYGADVNGTLYDPDVNEWNIGRLNTVLDTVERESGIKIKGVNTPYLYFGM
WKSTFAWHTEDMDLYSINYLHFGEPKSWYVVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILRKYGIPLEKVAQEAGQFIVTFPYAYHAGFNHGFNCAESTNFATQRWIDYG
KQAALCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSVIIDHSKPTPEAAEFLQDGKTL
GEKGELSNSSPAETRGERETETADEDGGARETEKGETVSDETDTMRGDKVIENIGAQQRK
TEAQEANAKGEETETRKTQLEASEIDKTQTETDKTEKTDIEKEATEEEGRESEMEIPAQE
AGVTDTNKPEREIGEIEMETENDSTEGREKDKTDEGKEETVTAEMETEEIKQPKTERETA
RREMETGKEELDSSEMKQDIGETDSGELETEKENLSVAQETDTSVTEMETQKNGMDSQET
DREDKENVKQEREIGQTEMASSQRGDMETETVCGKMESETESGVMESETGAREIRMVECK
TEIGEMECKTGRGTMERETGETGRGEMGHNTESGLIESETEREERERETWSGKMENETGE
AGRGEMESETGCGEMEGEVGETGREKMERETGCREMESMTGETGRGEMENETREKARGEM
ESETGEEGRVEMESETGEMESGQMESETVDKGRELESETDRGETKSEPEKTRREEVVTET
EETGKREIESETGEAARTVMENKTGVNTDRETRTEEVENETGQAIREDIESETGRGEVGS
EAGGTEEEEIEMEIKTGEVENETARGEVKSETRRGEMESLTGKEEMENEIGEIETEKGDM
ENETGRRETESITGKEEMESGTGGAGRGEIENITGKEGMESETGRGEMETITGNEGMESE
TGRGEIENITGKEVMESETGRGEMETITGKEDMESETGRGEIENITGKEDMESETGRGEI
ETITGKEDNKSETGRGEIETITGKEDNKSETGRGEMETITGKEDMDSETGRGETESITMK
EEMESWTGRGETESITLKEEMESDTGRGEVVSKNPDEERKVEIAKTVKQETVSANLEEKV
EEKEREIMETGGEKVETETEEETKTSSSSVRRRRSSAKPKVRMKRQRGASAGSAEAVEQL
KQKRTRLSQPEAKREAKQPGSTGQDESENEDRMEVGAPALKQEKKPDHSHLESPPPHFPA
NKQPIANTPKTHNRSHSTSLSCHITASSQPRNITTRPKETAPCCDLRTKRPQPNNTTSPS
RRAVITKPNKSTIKSPSSDISTDPSDLSIQAKPTNNSRHRGDITPKRRKTSPKHEAKPRE
SRGSSVPNDDSDEIKAAYGGSSAQRLFQRTLSSAEVLHVHSYAKGDYSDLDREQRDSDTD
TETQENGQQGAEDGSYEALNSLVRLPRHHPLIKDSISDEELQDQALIEEDGLEGELWAKP
LAQLWQNRPYNEQREREYNREMGLQPPYCAVCMIFQTHQRSEGTDCEQIVVQSGCQMRTK
PLIPEMCFSTTTEECTELHLSTPHLDQDGTSLLISCSQCCVRVHASCYGVSPERVTKDWK
CARCKANALTESCCLCSLRGGALHRANNDKWVHVLCAVAVLEARFVNITERSPVDLSGIP
LQRFKLKCYYCKRRMKKTTGCCVQCSHGRCPTSYHPTCAQAAGVLMHPDDWPFIVYVTCC
RHKGPVQSERKKEAMREIGAGQRVICKHKNGRYYQCDVVQLTKETFYEVNFDDGSFSDNL
FPEDIVSRDCAQLGPPPMGEVVQVRWTDGLIYGAKFVAAHVIQMYQVEFEDGSQLTAKRD
DVYTLDEELPKRVKSRLSKASDMRFDGIFGEKKLQDSKRQRVINSRYRGDYIEPVIYRTI
ME
NT seq 5949 nt   +upstreamnt  +downstreamnt
atggcctcagactcagtagctcaggctcctgggtcgaggatcatgaccttccacccgacc
aaggaggaattcaaagacttcaaccgctacattgcttatatggagtcaaagggtgctcac
ttagctggcatggcgaaggttgtgcctcctaaggactggaagccccgccgcacatacgat
gacattgatgacctggtcattcctgctcctattcagcaagtggtgacaggtcagtccggg
cttttcacacagtacaacatccagaagaagcccatgactgtccgcgagttccgcaagatc
gctaacacagacaggttctgcaacccccggtacgtagatttggatgagctggagaggaag
tactggaagaatcttacgtttaatcctccactctatggagcggatgtcaacggaactctc
tacgatccagatgtaaacgagtggaacatcgggcgtctgaacactgttctggacacagtg
gagagagagagtggcatcaagattaaaggggtgaacacgccgtatctgtacttcgggatg
tggaagagcacgtttgcctggcacactgaggacatggatctctacagtatcaactatctg
cactttggagaacccaagtcctggtatgttgtgcctccagaacacgggaagcgattagaa
cgtctcgctaaaggcttttttcctggaagtgcccaaagttgtgaagccttcttgcgacac
aaaatgactttgatttccccatcaattctcagaaagtatggcatccctcttgagaaggtt
gcacaggaagcaggtcagtttattgtgaccttcccttacgcctatcacgctggattcaat
catggattcaactgtgcagagtccacaaacttcgccactcagcgctggatagactacggc
aagcaggcagcgttatgttcgtgccgtaaagatatggtgaagatctccatggacgtgttt
gtgcgaaagttccagccagagcgatataaactgtggaaggcgggaaaggacagcgtgata
attgaccactccaaacccacaccagaagcagcagagttcttgcaggatggaaagacacta
ggagagaaaggagagctcagcaacagcagccctgctgaaaccagaggagagagggagact
gaaacagcagatgaagatggaggggcgagagaaacagagaagggagagacggtgtcagac
gagacagataccatgagaggagacaaagtaatagaaaatataggtgcacaacaaagaaag
acagaagcacaagaggcaaatgcaaagggagaggaaacagagaccagaaagactcaacta
gaagctagtgaaatagacaagacacagactgaaacagacaagacagagaaaacagacata
gagaaagaagcgactgaagaagaaggaagagagtcagagatggaaataccagctcaagag
gcaggtgtgacagatacaaacaaacctgaaagagaaataggggaaatagagatggagaca
gaaaatgacagcacagagggaagagagaaagataagactgatgagggaaaagaagagaca
gttacagcagagatggagactgaagaaataaaacagccaaagactgaaagagagacagca
aggagagagatggaaactggaaaggaagagctggacagcagtgagatgaagcaagacatt
ggtgagacagatagtggagagttggagactgaaaaagagaatctgtctgtggcacaggag
acagacacatcagtgacagagatggaaacacaaaagaatgggatggacagtcaagagaca
gatagagaagataaggaaaacgtaaaacaagagcgagagataggacagacagagatggcc
agttcccagagaggggacatggagactgagacagtgtgtggaaagatggagagtgaaaca
gagagtggagtgatggagagtgagacaggagcgagagagataagaatggtggagtgcaag
acagagattggagagatggagtgcaagacagggcgtggcactatggagagggagacaggg
gagacagggagaggagagatggggcacaacacagaaagtgggttgatagagagtgagaca
gagagggaagagcgggaaagagaaacatggagtggaaagatggagaatgagacaggggag
gcagggagaggagaaatggagagcgaaacagggtgtggagagatggagggtgaggtagga
gagacagggagagaaaagatggagcgtgagacagggtgtagagagatggagagtatgaca
ggagagactgggagaggagagatggagaatgagacaagagagaaagccagaggggagatg
gagagtgaaacaggagaggaaggcagagtagagatggagagtgaaacaggagagatggag
agtggacagatggagagtgagacagtagataaagggagagagctggagagtgagacagac
aggggcgagacgaagagtgagccagaaaagacaaggagagaagaagtggttaccgagacc
gaagagacagggaaaagagaaatagagagcgagacaggagaggcagcaagaacagtgatg
gagaacaagacaggagtaaatactgacagagaaaccaggacagaagaggtggagaatgag
acaggacaggcaattagagaagatatagagagtgagacagggagaggagaggtggggagt
gaggcaggagggacggaagaagaggagatagagatggagataaagacaggggaggtggaa
aatgagacagcaagaggagaggtaaagagcgagacaaggaggggagagatggaaagtctt
acagggaaagaagagatggagaatgagataggggagatagagacagagaagggagacatg
gagaatgagacagggagaagggagacagagagcataacagggaaggaagaaatggagagt
gggacaggaggggcagggagaggggagatagagaacataacagggaaggaaggcatggag
agtgagacagggagaggagagatggagaccataacagggaatgaaggcatggagagtgag
acagggagaggggagatagagaacataacagggaaggaagtgatggagagtgagacaggg
agaggggagatggagaccataacagggaaggaagacatggagagtgagacagggagaggg
gagatagagaacataacagggaaggaagacatggagagtgagacagggagaggggagata
gagaccataacagggaaagaagacaataagagtgagacagggagaggggagatagagacc
ataacagggaaagaagacaataagagtgagacagggagaggggagatggagaccataacg
gggaaagaagacatggatagtgagacagggaggggggaaacagagagcatcacaatgaag
gaagaaatggagagttggacagggagaggggaaacagagagcataacattgaaggaagaa
atggagagtgacacagggagaggggaagtagtgtcaaaaaaccctgatgaagaaagaaaa
gtagaaattgccaagactgtaaaacaagagactgtttcagcaaatctggaggagaaagta
gaagagaaagagagagagattatggagacaggaggggagaaagtggagacagagacagaa
gaagagacaaagacaagcagttcttctgttcggaggaggagaagcagtgccaagccaaag
gtgaggatgaaacggcagagaggagctagtgctggttctgctgaggctgtagagcagctc
aagcagaagagaaccaggctcagtcaacctgaagcaaagcgtgaggcaaaacagccaggt
tcaacaggccaagatgagagtgaaaatgaggaccgcatggaagtaggggctccagcatta
aaacaggaaaagaagccagaccactcccacttggagagtcctcctcctcactttccagca
aataaacagccaatcgccaacactcctaaaacgcataaccgaagccatagcacttctctg
tcctgccatatcactgcgtcttcccagcctcgcaacatcaccactcggcccaaagaaacc
gctccatgctgtgatcttagaactaagcgccctcagcctaacaacaccacctccccatct
cggcgtgcggttatcaccaaacccaacaaatccaccattaaatctccatctagcgacatc
tcgacagacccgagtgacctcagcattcaggctaaacccaccaacaactcgagacaccgt
ggcgatatcacaccaaaacgcaggaaaaccagccctaaacatgaagccaaacccagggag
agccgtggcagctctgttccaaacgatgacagtgatgagattaaggctgcctacggaggg
agctcggctcagcggcttttccaacggacactcagttctgctgaggtgctacacgttcac
agctacgctaaaggagactacagcgatctggacagagagcaaagggacagcgacacagac
acggagacgcaggagaatggacagcagggggcagaagatggctcttatgaggcactgaac
agtctagtgaggctgcccagacatcatccgctaataaaggacagcatcagtgacgaggag
cttcaggaccaggctttaattgaggaggatggtttagagggtgagctgtgggctaaacct
ctggctcaactgtggcagaacagaccttacaatgaacagagagagagagagtacaacaga
gagatgggcctccagccaccatactgcgccgtctgtatgattttccagacgcaccagcgg
tctgaagggaccgactgtgagcagattgttgtacaatctggatgtcaaatgaggacaaag
ccactgatccccgagatgtgtttcagcacaaccactgaagagtgcactgaacttcatctg
tccactcctcacttggatcaggatggaaccagcctgctcatcagctgctcccagtgctgt
gtgcgtgtgcacgccagttgctatggcgtttcccctgagagagtcacaaaagactggaaa
tgtgcccgttgcaaagccaacgccctcacggagagttgttgtctgtgctcattaagaggt
ggagccttacacagagccaacaatgacaagtgggtgcatgtgctgtgtgcggtggcagtg
ttagaggctcgcttcgtgaacatcacagagagatctccagtggatctcagtggcattccc
ttacagagatttaagctgaaatgttactactgtaagaggcggatgaagaagacgacaggc
tgctgtgtgcagtgttctcatggccgctgccccacgtcataccaccctacctgtgcccag
gctgcgggtgtccttatgcacccggatgactggcctttcattgtctatgtcacctgctgc
cgtcacaaaggccctgtccaatcagagaggaaaaaggaggccatgagggaaatcggcgca
ggccagagagtgatctgcaagcacaaaaacggacgctactaccagtgtgatgtggttcag
ctgacaaaagagacattttatgaggtcaactttgatgatggctccttcagtgacaacctc
tttcctgaggacattgtgagccgtgactgtgcccagctgggtcctccacccatgggagag
gtggtgcaagtgcgttggacagacggactcatctacggagccaagtttgttgcagcacac
gtcattcaaatgtaccaagtggagtttgaagatggctcacagctcacagccaagagagat
gatgtctacacattagacgaagaactgcccaaaagggtgaaatccagactgtcgaaggca
tcagacatgcgtttcgatggcatctttggagagaagaagctgcaggacagcaagaggcag
cgggtgattaactcaagatacagaggcgactacatcgagccggtcatctaccgaaccatc
atggagtaa

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