Pangasianodon hypophthalmus (striped catfish): 113532265
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Entry
113532265 CDS
T05759
Symbol
fbh1
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113532265 (fbh1)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113532265 (fbh1)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113532265 (fbh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
F-box-like
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
F-box
AAA_30
AAA_11
PhoH
ResIII
AAA_24
AAA_22
DUF1248
AAA_12
Motif
Other DBs
NCBI-GeneID:
113532265
NCBI-ProteinID:
XP_026779362
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
METASKGKAKRRHLSAAECSGLSQSLPGSQAITQPFTLNLHNKDPNKGLQPRTPTKRRRR
DGLQQRVITGFFASAGVLRSSPLKGNTVKTEPGLNGHIVIKEEEEERDVTMDLMEGITEE
MFVDDEEFETGMCSVKKEENEQEGTGAGCSSWVSRPLHSSFINGHMKKEEEDDEEYEVQS
LPDAHYGLLGLNRALLEPRGHIQDLPEEVLSVIFAQLPADDLYRHVSLVCRHWREIVMDS
QFLPWKKLYYRYDKQEEVAVKQLNALLEDNGIVRNDDLCVLNMVRYMSQFKHSRRVNVAD
VLRCVKGHRLYAQAEACVKHRLPDMETVDGGPNPWSAMALMLILADGVKDVLDLVARLRT
SGCFLTPDRISEFLWAMATILLAMKNTNITITSRWHYNIFYVLHLMENSPPPLSHGDGRE
KQIHVTHEQQQILNHDIQRDHVVKIMAFAGTGKTTTLVKYAQQRPHLRFLYISFNKSVAM
QATRSFPSNVECRTIHSMAYKAIGHRYKNLSKLCSNLKPFTVAWVLPEGRGGFVNAKVVT
QTINNFCSSTDECIGPQHVPDRYKNTTGREECPTKSKRKLFAHDAQNIWRKMTELNPTKE
AAHHITHDGYLKLWQLQKPELKDYDVIFIDEAQDCTPVIMDIMLSQACGKILVGDPHQQI
YTFRGAVNALHTVPHTHLYYLTQSFRFGSEIAYVGATILNVCKKVKKILVGGRHDGSVRG
EDRETLDNIRLAHSQVGGKVAILCRCNVTVFSEAVRLTDINPNCKIHIVGGVENFGLKQI
LDIWILMQPEERRRNENLWIKDPFIRSFCKEKLGGYAGLKKYATHTEDRELEAKLSVVEK
YNKRIPELVDQIYNCAQSKPNCADYILGTVHKSKGLEFDTVVVTDDFIKVPCSRHNLQRI
NINPAIRKADADEWNLLYVAVTRAKRELYITKSISNILTLAGEYFLRFELSRTLLNTDQY
RRCSTRECPNLITVESPLSMHKLPIRYMDTAEEGGILCATCVEQRVGPVAFLLSPPETIK
SMHYTEERPELPINIAMLLALL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcttcaaaaggaaaggccaagcggaggcacctgagtgcagcagagtgcagc
ggtttgagccaaagcctccccggcagccaggcaatcacacagcctttcaccctgaacctc
cataataaagaccccaataaaggacttcagcccaggaccccaactaagaggagaagaaga
gatggcctacagcagagagtcattacaggattctttgcgtctgctggagtccttaggagc
agcccgctaaaaggcaacacagtgaagacggagcccggattgaacggtcacatcgtcata
aaggaggaggaagaggaacgagatgtgacgatggacctcatggaaggcattactgaagag
atgtttgtggatgatgaggagtttgagacaggcatgtgttcggtaaagaaagaggagaat
gagcaggaggggacaggagcaggatgcagcagttgggtgtctcgtccacttcactccagt
tttattaacggacacatgaaaaaggaggaagaagatgatgaagagtatgaagtgcaaagc
ctccctgatgctcattacgggttgctgggactgaatcgggcgctgctggagccccggggt
cacattcaggacttgcctgaagaggttctgagtgttatttttgctcagctcccagcagat
gatctttaccgccatgtcagtctggtgtgtcggcactggagagaaatcgtcatggatagc
cagtttctgccatggaagaagttgtactacagatacgacaagcaggaggaggtggcagtg
aagcagctgaatgccctccttgaagacaacggcattgtcagaaatgatgatctttgtgtt
ctgaacatggtgaggtacatgtcacagtttaagcacagcagacgggtgaatgtggcagat
gttttgcggtgtgtgaaaggccatcggctctacgcccaggcggaggcctgcgtcaagcac
aggctgccagacatggagacggttgatgggggaccaaacccctggtctgccatggccctg
atgctgatccttgcagatggggtgaaggatgtcctggacctggtggctcgtttacgaacc
tctggctgtttccttactccagacaggatctcggagttcctgtgggctatggctacaatt
cttctcgccatgaagaacactaacattaccatcactagtaggtggcactacaatattttt
tatgtgttgcatctgatggagaactcaccaccgcctctgagtcatggtgacggcagagaa
aagcagatacacgtcactcacgaacagcagcagatcctcaatcacgacatccagagagac
cacgttgtcaaaatcatggcttttgctggtactggaaagacaacgactctggtgaagtat
gctcaacaaagaccacatttgcgcttcctctatatttccttcaacaagtcagtggccatg
caggccacccgcagttttccttctaatgtagagtgcaggaccatccactctatggcctac
aaagctattggacacaggtacaaaaatctgagtaagctgtgcagtaacttgaagccgttc
acggtggcctgggtgcttcctgagggccgcggcggcttcgtcaacgccaaggtggtgacg
caaaccatcaacaatttctgctcctccacggatgagtgcattggcccacagcatgtccca
gaccgctacaagaataccaccgggcgtgaggagtgcccgaccaaatccaaaagaaagttg
tttgcacatgacgcacaaaacatctggaggaaaatgactgagctgaaccccaccaaagaa
gcggcacaccacataacccatgatggttacctcaaactatggcagctgcagaagcctgaa
ctcaaagactatgatgtgatttttatagacgaagctcaggattgcactccagtcatcatg
gacatcatgctttctcaggcctgtggaaagatcctggttggagatccccatcagcagata
tacactttcagaggagccgttaatgctttacatactgttccacacacacatctttactac
ctaacacagagttttagatttggctctgagattgcctacgttggtgcgacaatcctaaat
gtctgcaaaaaggtgaaaaagattttggttggtggacgccacgatggcagtgtgagagga
gaggacagggagactctggacaatataagactggctcattcacaagttggaggaaaggtg
gccattttgtgtcgctgtaatgtaacagtgttcagtgaagcagtacggctcaccgacatc
aaccctaactgcaagatccacattgtcggcggtgttgaaaattttggcttgaagcaaatc
ctggatatctggattctgatgcagccagaggagagacgtaggaacgaaaacctgtggatt
aaggacccgtttatccggagcttctgtaaggagaagctgggcggttacgcaggcctgaag
aagtatgccacacacacggaagaccgtgagctggaggctaaactgtctgtggtggagaaa
tacaacaagcgcattccagagctggtggatcagatctacaactgcgctcagagcaagccg
aactgtgcagactatatcctgggtacggtgcataaatccaagggtctggagtttgataca
gtagtggtgacagacgacttcatcaaagtgccttgctccagacacaacctgcagagaata
aacattaacccagctataagaaaagctgatgcagatgagtggaacctgctgtacgtggcc
gtgactcgagccaagagagagctgtacatcaccaagagcatcagcaacatcctcacactt
gcaggggaatactttctgaggtttgagctgagcaggacgcttttaaatacggatcagtat
cgccgttgcagcacccgagagtgtcccaacctcatcactgtggagtcaccactcagcatg
cacaaactccctatcagatacatggacactgcagaggaaggcggtatcctctgtgctaca
tgtgtggaacagcgtgtaggccctgtagctttcctgctttctccacctgagacaatcaag
tctatgcattacacagaggaacgaccggagctgcctattaacatcgccatgctgctggct
ctgctataa
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integrated database retrieval system
