Pangasianodon hypophthalmus (striped catfish): 113532283
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Entry
113532283 CDS
T05759
Symbol
zbed4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113532283 (zbed4)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
113532283 (zbed4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
113532283
NCBI-ProteinID:
XP_026779392
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MDGEEGLSQKTDDVHLEHNGSVENDKRKEVKETCLKIEGQDGYVFKSYSMTPHENPLAKK
SSLVSSSLKGTLSDVSSQVDGHLVDGPEAETCDKQDCSTSPAISDDTTHTTEIDKDNSIN
DTSVHIKEEPVETGESSQEDDKLFFDGAVGPFVTRSNDDDYDNLLSGYTSTLYDVAMDAV
TQSLLTSIRNPLNPRKKSPAWNHFFISPRDSTKAICMYCMKEFSRGKNEKDLSTSCLMRH
VRRAHPTVLLQDSDSPNTSSNSASSLIPPVKSPNNDLAASSKSHSNNHTSPSTSTAEAAD
VAFKEVSQKVKPKVEKSAKADSGAAPSPHSINNHSDDAMDIGSDCSGSTPKSANSRRRSA
VWKHFYLSPADSSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRDIVIEENGQGSTI
PPPYTTPPTLLSHSQMQDPVEVKKEPPCTSSSPETMSDEVPMDDRENMEFKEEVNDASYH
SGHESSLNMSFGLKSESIQLSSSPEDSAEVSSLTQEPSSVFQQNKKIMKRVKSEVWHHFI
VSPVDQLKALCRYCPCVISRGKRGDFGTSCLMRHLMRRHPDVLKNQKSTSDKATLPQSLH
RTLTAEEDMSSNATDSPASEKKQHTQTIFSKKTSKLWNHFSLSSADPTKVVCLHCNRTIS
RGKKTTNLGTSCLFRHMQRFHGHVLENNSNISGDASSAEIQVKQKLMDTSAYEESSEKFD
DCHPVAKKITRLVAEMLALDLQPSAVVENVGLNRLLEYLQPQYSLPSSSYFTSTAIPEMY
ESVKEVVLTHLKEAESGIIHFTTSIWVSSQTREYLTLTAHWVTFESRVRPQGQDFHCSAL
LGVSPIDCDYNMLSIQKQLEYLWDTWIVSSGLKLGFTVTDNQAIGNVLEDNAHTLMNCFG
HNIDLIVNEAIKSQRMVQNLLSIARKICERVHRSAKAKEKLAELQKAYNLPENQLIQDVP
SKWKTSYFMLERLVEQKKAIDEMSLECNFRELISCDQWEVMQSVCNALKPFEVACREMSN
RTATLGQVIPLIHILNRKIDMLFDETMGIDNMLKSLKEAMVTRMSPTLHDPRYTWATMLD
PRYKTSLFTEEEAEKCKQELIREVQRVSISASAETKPPLSNGCSEDPAPSNSSTTNKDNL
WALMDDIRQKIKQDDRPKSSELAVLEYLEEDILDQSCDPLDYWNLKLFLWPELAKVAVRY
VGCPPSIVPADTLFSTSSVNCALNQSRPLLENLERLLFLKVNLPLIYFQY
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaggaaggcctttctcaaaagactgatgatgtgcacttggaacataacggt
tctgtggagaatgacaagagaaaagaggtcaaagaaacctgtttgaaaattgaggggcaa
gacggttatgtttttaaatcatacagcatgacccctcatgagaatccactggcaaaaaag
tcttcacttgtgtcctcgtccctgaagggaacactcagtgatgtatcttctcaggttgat
ggacatttagtagatggtccagaggcagaaacctgtgataagcaggactgttcaacttct
ccagccatttcagatgatacaactcatactactgaaatagacaaagataattcaataaat
gacacaagtgtacatatcaaagaggaaccagttgaaacgggtgaaagttctcaggaggac
gataagttattctttgatggggctgtaggcccctttgtcactagaagtaatgatgatgat
tatgataacctactgagtggctacacaagtactctttacgatgttgcaatggatgcggtc
acacaaagccttctgacatctattagaaaccctcttaatccaagaaaaaaatctcctgca
tggaaccattttttcatatctccccgcgatagtaccaaagctatctgtatgtattgtatg
aaagagttcagtcgaggtaaaaatgagaaagacctcagcactagttgtttaatgaggcat
gtgcgaagggctcaccctactgtacttttacaagacagtgactcgccaaatacttcatct
aattctgcctcatctctaatacctcctgtcaaatcaccaaataatgatctggcagctagc
agtaaatcccactcaaacaatcacacctcaccctccacctctacagcagaagccgcagat
gtagcattcaaagaggtatcccaaaaagtcaagccaaaagtggaaaagagtgccaaggct
gactctggtgcagccccatcccctcattccattaacaaccacagtgatgacgccatggac
attgggtctgactgctcaggatctacgcctaagagtgcaaattctcgaaggcgatcagcc
gtgtggaaacacttttatctgtctcctgctgatagctccaaagcagtgtgtattcactgt
atgaatgagttcagtcggggtaaaaacgggaaagacctagggacaagttgtctaattcgc
cacatgtggcgggcccaccgagacattgtcatcgaagaaaatggacagggttcaacaatt
cctccaccatatacaacaccgccaacactgttatcacactcgcagatgcaggaccctgta
gaagtcaaaaaagaacccccttgtacctcctcatcccctgaaaccatgtcagatgaagtg
cccatggatgaccgtgaaaatatggaatttaaggaggaggtaaacgatgcctcatatcat
tctggacacgagtcttcactgaacatgtcttttggtctaaaaagtgaaagcatacagctg
tcatcctccccagaagattctgctgaagtctcaagcctaactcaagagccaagctcagtt
ttccaacaaaataaaaagataatgaaaagagtgaaatctgaagtatggcaccacttcatt
gtctccccagttgaccagctcaaggctttgtgtcgatactgtccatgcgtcattagtcgg
ggcaaacgtggagatttcggcacaagctgtttgatgcgtcatctgatgagacggcatcct
gatgtcctaaagaaccaaaaaagcacaagtgacaaagcgaccttacctcagtcactccat
agaaccctcactgcagaggaggacatgtcatcaaatgcgactgacagccctgctagtgag
aagaaacagcacacacaaaccatttttagcaaaaagacttcaaagctgtggaatcacttt
tctctttcttctgcagaccctacaaaggtggtctgtttgcactgtaaccgcacaataagc
agggggaaaaagacaacaaacctgggcactagttgcttgtttaggcacatgcagaggttt
catggacatgtgcttgagaataatagtaatatctcaggggatgcatcatctgcagaaatt
caagtaaaacagaagctcatggacacatctgcgtatgaggagagtagtgaaaaatttgat
gattgtcacccagttgccaaaaaaatcaccagactcgttgctgaaatgcttgcactggat
cttcagccatcagctgtggtggaaaatgttggtctgaaccgattactggaatacctccaa
ccacagtattctcttccttcttcatcatacttcaccagcactgccataccagaaatgtac
gaaagtgtaaaagaggttgtcctgacacacctcaaagaggctgagagtggaattattcat
ttcacaacaagcatatgggtaagcagccaaacgcgggaatacctgactcttacagcccac
tgggtgacgtttgagtcacgtgtccgacctcagggccaagatttccactgctcagctctg
cttggtgtctccccaatagactgtgattataacatgcttagcatacagaagcaacttgag
tacctttgggacacctggattgtttcctcaggcctgaagcttggattcactgtcactgat
aatcaagccattggaaatgttctggaggacaatgctcacaccctcatgaactgttttggt
cataacatagatctcatcgttaatgaagccataaagagccagaggatggtacagaacttg
ttaagcatcgcgcgaaagatctgtgaacgagtacatcgttcggcaaaggcaaaggagaag
ctggcagaacttcaaaaagcctataacttgcctgaaaatcagttgatccaggatgttccc
tccaagtggaagacctcatattttatgcttgaaaggttagttgagcaaaagaaagccatt
gacgaaatgtctttagagtgcaatttcagggaacttataagctgtgaccagtgggaggtg
atgcaatcagtttgcaacgctctgaaaccttttgaagtggcctgcagggaaatgagcaat
cgaacggccactcttggccaggtcataccgctcattcatattctcaaccgcaagatagac
atgcttttcgacgagactatgggtattgataacatgcttaaatctctaaaagaggccatg
gtgaccagaatgtctcccacacttcatgatccacgttatacatgggcaacgatgctggac
cctaggtacaagacatccctgttcaccgaggaggaggctgagaagtgtaagcaggagctc
atacgagaagttcagagggtatccatatctgcgtctgcagaaacgaaacctccattgtct
aatgggtgcagtgaggacccagctccatctaacagttcaaccacaaacaaggacaacctg
tgggccctgatggatgacataaggcaaaagattaagcaagatgaccggccaaagtcatcc
gagcttgctgttctggagtatttggaggaagatatacttgaccagagctgtgatcctttg
gactattggaatctcaagttgttcttgtggcctgagcttgccaaagtagccgtacgttat
gtgggttgtccacccagcattgtaccagcagatacactgttcagcacatcaagtgtgaac
tgtgccctgaatcagtctcgaccattgctagaaaatcttgaaagactcttatttttaaag
gtcaaccttcctttgatatattttcagtactaa
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