Pangasianodon hypophthalmus (striped catfish): 113532306
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Entry
113532306 CDS
T05759
Symbol
tmtc2
Name
(RefSeq) transmembrane and TPR repeat-containing protein 2 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
phyp01003
]
113532306 (tmtc2)
Glycosyltransferases [BR:
phyp01003
]
O-Glycan biosynthesis
O-linked Man type
113532306 (tmtc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TMTC_DUF1736
TPR_12
TPR_16
TPR_11
TPR_17
TPR_10
TPR_7
TPR_19
TPR_14
TPR_CcmH_CycH
NatA_aux_su
TPR_6
TPR_Slam
TPR_9
TPR_MalT
TPR_4
FAT
TPR_15
TPR_21
TPR_3
ANAPC3
HAT_Syf1_CNRKL1_C
RNPP_C
ARM_TT21_C
ARM_TT21
Suf
DUF7017
TPPII_C
Motif
Other DBs
NCBI-GeneID:
113532306
NCBI-ProteinID:
XP_026779434
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MIRELVCGAVALLLYVNTLDADFCYDDSRAIKTNPDLLPETPWTNILYSDFWGTRLTHSG
SHKSFRPLCTLSFRLNYALGGLEPRGYHLFNVGLHCCVTALFTALCGLLLAGGPWSLLAG
LLFASHPVHTEAVAGLVGRADMGAALCFLLSLLCYRCHCRLRPHAGKSWCMRWRVQAWLA
GSLVAAAAAMLWKEQGVTVLAVSAVYDVCVVHRMQLHHMLEVFLKRKNATLLVSLAWLAG
WGTVLLAARLYWMGCKPPQFSNSDNPAADSPHLLTRTLTFLYLPPANAWLLLCPHTLSFD
WSMDAIPLLTNISDWRNLCSLAFYLGFVVLACFGLKSKNSATFQTTNGKSHIMNGKALAN
GHSLHFPDSNNKHDNGHHHNGLTSSEVFASTQNGYSKPLHAATHTSLPSKENMVVFSLGL
LALPFLPATNLFFYVGFVVAERVLYIPSMGFCLLVTLGIRAMFVKMRRRSSRALLFGCAA
GLVLLYSLRTVCRNQDWQSEEMLYRSGITVNPAKAWGNLGNVLKNQGKMAEAEEAYRNAL
YYRGNMADMLYNLGLLLQESERFSEALHYYKRAIQSRPTLASAYLNTGIIFESEGNVEEA
KRTFETCASIPDENLKDPHAHKSAVTSCLYNLGKLLHEQGQQEEALSVYKEAVKKMPHQF
APQSLYNMMGEAYMRLNKFEDAEHWYRESLKAKPDHVPAHLTYGKLLSVMGHKTEAEHYF
LKAIELDPTKGTCYMHYGQFLVEQSRLGEAAVMAEKAAELDSTEFDVVFSAAHILRQARL
NEAAERYYGKAADIRPDYAAALMNLGAILHLNGKLAEAEANYLRALQLKPDDLITQSNLR
KLRNVMHRRGLKTVGS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgataagggagttggtgtgcggcgctgtggctctgctcctgtacgtgaacacgctcgac
gcggatttctgctacgatgacagtcgtgctatcaaaaccaatccagatctcctgcctgag
acaccttggaccaacatactgtacagtgacttctggggcactcggctcactcacagtggc
agccataagtccttccggccgctctgcacactctctttccgcctcaactatgctctgggt
ggcctggagccaagaggctaccatttattcaatgtgggcctgcactgctgtgtcacagct
ctgttcactgcgctttgtggcctcctgctagccggaggaccctggagtctgctggctgga
ctcctcttcgcctcacacccagtgcatactgaggcagtagcgggactggtaggacgtgca
gatatgggcgctgccctgtgctttctactctctctgctctgctacaggtgccactgcagg
ctccggccacacgctggaaaatcgtggtgcatgaggtggagagtgcaggcatggttggct
ggtagcctggttgctgcagcagcagctatgctgtggaaagagcagggggtgactgttttg
gctgtgtcagctgtctatgacgtctgtgtggtccaccgcatgcaactgcatcatatgcta
gaagtcttccttaagaggaaaaatgcaaccctgctcgtaagcctggcttggctggctggt
tggggaacagtcctgctggcagctcgactatactggatgggctgcaagccaccacagttc
tccaactccgacaacccggcagctgattcacctcacctcctcaccagaacacttaccttc
ctctacctgccacctgccaatgcctggctcctcctctgtccacacacccttagctttgat
tggtctatggatgccatacccttgctcacaaacatttctgattggaggaacttgtgctca
ctagcattttacctaggctttgtagtgcttgcttgttttggcttaaaaagcaagaattct
gccactttccaaacaaccaatggaaaatcccatatcatgaatggaaaagctctggctaat
gggcacagcctgcattttcctgacagcaataataaacatgacaacggccaccaccacaat
ggcttaacctcatcagaagtttttgccagtacccagaatgggtattccaaaccccttcat
gctgctactcacacatcactgccatccaaagagaacatggtggtcttctcacttggtctt
ctggctttaccttttctccctgccaccaatctattcttctatgtgggctttgtggtggct
gagagggttctctacatccccagcatgggcttctgtctactggtgacacttggaattagg
gccatgttcgtaaaaatgaggcggagaagctccagggcactgctgtttggctgtgctgct
ggacttgttctgctttactccctcagaacagtgtgcaggaaccaggactggcagagtgaa
gagatgctctacaggtctggcatcactgtgaaccctgccaaagcttggggtaaccttggc
aatgtcttgaagaaccagggtaagatggcagaggcagaggaagcatacagaaatgcctta
tactaccgtggcaacatggctgacatgctctacaacctgggtctgttgctgcaagagagt
gaacgtttctctgaggctctgcattactataaacgggccatccaaagcagaccgactctg
gcatctgcatatttaaacactggtattatatttgagtctgagggaaacgtggaggaggcc
aagcgcacatttgagacgtgtgccagcatcccagatgagaacctaaaggacccccatgct
cacaaaagtgcagtcactagctgcctgtacaatcttggcaagctgctgcatgaacagggt
cagcaagaggaagctctgtccgtttataaagaggctgtgaagaagatgcctcatcagttt
gcaccacagagcctttacaacatgatgggtgaagcctatatgagactgaataagtttgag
gatgcggaacactggtacagagagtcacttaaggccaaaccagaccacgtccctgcccac
ctgacatatggcaagttgctgtctgttatgggtcataaaactgaggcagagcattacttc
ctgaaggcaatagagctggatcccaccaaggggacgtgttatatgcactatggtcagttt
ttggtggaacagtctcgattaggagaagctgctgtgatggctgagaaggctgctgaactg
gacagcacagaattcgatgtagttttcagtgctgctcatatactcagacaggcaaggctg
aacgaggcagctgaaaggtattatgggaaggcagcagacattagaccagattatgctgct
gctctgatgaacctcggggccatcctccatctcaatggaaagcttgcagaggctgaggcc
aactacttgcgtgcgcttcagctcaaacctgacgatctgatcacgcagtccaatttgcgc
aaactccggaatgtcatgcacaggcgaggactgaagactgtggggtcatga
DBGET
integrated database retrieval system
