Pangasianodon hypophthalmus (striped catfish): 113532411
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Entry
113532411 CDS
T05759
Symbol
mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113532411 (mkrn1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113532411 (mkrn1)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113532411 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113532411
NCBI-ProteinID:
XP_026779624
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAEAAAAAVASTAAPATTTGGWTKHVTCRYFMHGLCKEGDNCRYSHDQSSSKPAMICKFF
QKGCCAFGDRCRYEHTKPAKQEELPGPMPSVLLPAAPLTLAGDSGSMPSGPAGMSKARER
PHSSGGVDWVNAAEFVPGQPYCGRADPVIVDCPGPLIEDEYEKEQTNKELKKQLCPYAAV
GECRYGLNCAYLHGDVCDMCGLQALHPSDTAQRSQHIRACIEAHEKDMEISFAIQRSKDM
MCGVCMEVVFEKANPSERRFGILSNCNHCYCLKCIRKWRSAKQFESKIIKSCPECRITSN
FVIPSEYWVEDKEEKQNLIQKYKDGMGSKPCRYFDEGRGTCPFGANCFYKHAFPDGRLEE
PQPQSQNQRRQNGSNARNRGSRRTPLWDLLDERESSDSLDNDDEEMVTFELSEMLLMLLA
AGTDEDVTDSEDEWDLFHEELDDYYELYL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggcggcggtagcgtctaccgcagctccggcgacaacaacggga
ggctggaccaaacacgttacctgcaggtatttcatgcacggtctttgcaaagagggggac
aactgtcgatactcgcatgaccaaagcagcagcaagccagccatgatctgcaagttcttt
cagaaaggatgctgcgcgtttggagaccgctgcaggtatgaacacaccaaaccagccaag
caagaggagctccctggccccatgccctcggtgctgcttcccgctgcccccctcaccctt
gctggtgactctgggtccatgcccagtgggccagctggcatgtccaaagcccgggaaagg
ccccacagctccgggggagtggactgggtcaatgccgccgagtttgtgccaggccagccc
tactgcggaagggcagatcctgtgattgtggattgtccagggcctctcatcgaggatgag
tatgaaaaggaacaaaccaacaaggagctgaagaagcagctgtgcccgtatgcagctgtt
ggtgagtgccgctacggcctcaactgtgcctatctgcacggggacgtgtgcgacatgtgc
ggcctgcaggcgctccatccgtccgacactgctcagcgctctcagcacatcagagcgtgc
atcgaggcccatgagaaggacatggagatctcgttcgctatccagcgcagtaaagacatg
atgtgtggcgtgtgcatggaggtggtgttcgagaaggccaatcccagcgagcgtcgcttc
ggcatcctctccaactgcaaccactgctactgcctcaaatgcatccgcaagtggaggagt
gccaagcagtttgagagcaagatcataaagtcctgcccagagtgtcgaatcacgtccaac
tttgtcatcccaagcgagtactgggtggaggacaaggaggaaaagcagaatctcattcag
aagtacaaggatggcatggggagtaagccctgtcgatattttgatgagggccgtggaact
tgtccatttggagctaattgcttctacaagcatgccttccctgatggacgcctcgaggag
cctcagcctcagtcccaaaaccagcgaaggcagaatggctccaacgcaaggaacagaggc
tcgaggcgcacgccgctctgggatctgctcgatgaacgggaaagcagcgactccttggac
aacgacgatgaggagatggtaacgtttgagctgagcgagatgctgcttatgcttctggcg
gcaggaaccgacgaagacgtcaccgactctgaagacgagtgggacttatttcacgaggag
ctggacgattactatgagctctacctatag
DBGET
integrated database retrieval system
