Pangasianodon hypophthalmus (striped catfish): 113532425
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Entry
113532425 CDS
T05759
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyp03032
]
113532425 (rtel1)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113532425 (rtel1)
DNA replication proteins [BR:
phyp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113532425 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
113532425
NCBI-ProteinID:
XP_026779661
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MPSLTLRGVTVDFPFTPYPCQTDYMSKVIECLQNKVNGVLESPTGTGKTLCLLCAALGWR
AYFKDSISARKIAERMGGAELFPDRSMSSWGTAATDGETPAYYTDIPKIIYASRTHSQLT
QVISELKNTSYRPKICVLGSREQLCINQEVMKQESNHVKVHMCRAKVSSRSCVFYNNVDE
KSTDKDIINSILDVEDLVKTGKKERVCPYYLSRSLKQHADLIFMPYNYLLDPKSRRAHNI
ELKGAVVIFDEAHNVEKMCEESTSFDLTPYDLTTAIDAVDKLLREQASDIGKGESSEDFN
AESLNSGLNLDITTIAKIKQILMDLEIAINSFEMPYNNQGITKPGSFIYELLQKAHVNYD
TKTAVVEAMEQITGYLAGKPGIFLNTSGLQKVADIIQLVFAVEPAEGGMQSHKGNSMQQF
KVHIHPDTSNFKKKQSTDLWASSSTRKQGNVLSYWCFSPGFSMQDLLRQEVRCIILTSGT
LSPLSSFTCEMQIPFPVCLENPHVIQKDQIFVSIIDKGPDGVQLSAAFDRRFVPENMASL
GNTIVNLSRVVPHGLLVFFPSYPVLDKTLEYWKASGHVDRIESMKPMFVEPKGKGTFTEV
MDGFYDKVNDSKANGGSFFAVCRGKVSEGLDFADTYGRGVIITGLPYPPRMDPRVVLKMQ
YLDEMCKNKTSGVKYLSGNEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDYRFKNLDVR
QQLPSWVRPYVRTYENFGTVVRDAAQFFRVAQKLRPVPEKKMKGTGCESQTAKATSQSSP
GCSRSAQSAWECSSSLKAKVFDSHVPSLKRRKLGEHLERDGTARLCIQYEMEMSSSKNRP
MSLLDALDESDPNRDEDDTFVGEEKASRLSTLSLQHDKRMDDESRGGKRKIRVVQDRKPI
DSSAAGKGKAFMLELKRSLSLESFTQIMHALQVYKATDNLNDLVAKAADLLIQDPNTHIL
LRGLYQFVRPHHKKQFDEKCELLTGKGCGYKPEHSLSREERALLMKQTAKVETSEMCTTT
QLDSSRQLNQGGSHLGTHNLCGMDASGKDQKLQQSGKESQFSASLLSDIKKAIGAEKTNQ
LFVALQTYKKTNDYEQMVSTVVGLLTERDEDIILLKRLTAFIPAPHRQQFSEMLISLTGS
VSMPCQDSDEVSSPPISVSQLCAGKSQSKISSFFS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttactttaagaggagttactgtggattttccctttactccatatccatgc
cagacggattatatgagcaaagtgattgagtgcctgcaaaataaagtaaatggagttctt
gagagtccaactggcacagggaaaaccctgtgcttgctttgtgctgcgcttggctggagg
gcgtatttcaaagactccatatccgcccgcaagattgcagagagaatgggaggtgctgag
ctttttcctgacaggtcgatgtcatcttggggaacagcagcaactgacggagaaacacca
gcatattacacagacattcccaaaatcatctacgcatcgaggacacattctcagttgacc
caggtcatcagcgagctcaagaacacatcctacaggccgaagatttgcgttctgggctcc
agagaacaactgtgtatcaaccaagaagtaatgaagcaagaaagcaaccatgtcaaggtc
catatgtgccgagcaaaagtgtcgtcccgctcttgtgtcttctacaataatgttgatgag
aagagtaccgacaaggacatcataaactctatcctggacgttgaagatcttgtgaaaact
gggaaaaaggaaagggtgtgtccatattatctgtctcgctctctgaagcagcatgccgac
ctcatattcatgccctacaactacctccttgatccaaagagtcgtcgagcacacaacata
gagcttaaaggagccgttgtcatatttgatgaagcacataatgtggagaagatgtgtgaa
gaatctacctcgtttgacctgactccttacgatttgactacagccattgatgctgtagac
aagcttttgagggagcaggcctcagatattggcaaaggagaatcttcagaagatttcaat
gctgaatctttaaactcaggtctgaacctggacatcaccactattgctaaaataaaacaa
attttaatggacctggagattgccataaatagctttgagatgccttacaataaccagggg
attaccaagcctggcagttttatttatgagcttttgcaaaaggcccacgtaaactacgac
actaaaaccgcagttgtggaggcgatggagcagatcacaggatatttagcaggaaagcct
ggtatcttcctcaacaccagtggactgcagaaagtcgcagatataatacaattggtgttt
gcagttgaacctgcagagggcggtatgcaatcacacaaggggaacagcatgcagcagttt
aaggtacacattcatccagacactagcaatttcaagaaaaagcagagcactgatctgtgg
gcgtcctcttctacaaggaaacaagggaatgtgctgagttactggtgtttctccccggga
ttcagcatgcaagatctcctcaggcaggaagtgcgctgcatcatcctgactagtggcacc
ctgtcacccctgtcatccttcacctgcgaaatgcagatcccctttcctgtgtgtctggag
aaccctcatgtcattcagaaggaccagatctttgtcagcattattgacaaaggaccggac
ggcgtgcagctcagcgcagccttcgacaggaggtttgttcctgagaacatggcatcatta
ggaaacactattgtaaatttgagtcgagtggttcctcatggcctgctagtgtttttccct
tcgtacccggtgttggataagacgcttgaatattggaaggctagcggtcatgtagaccgc
attgagtcaatgaagcccatgtttgtggaacccaaaggaaaaggtacctttacagaggtt
atggatggcttttatgacaaggtaaatgactccaaggcaaacggaggaagcttctttgct
gtatgtagaggaaaggtgagtgaagggttggactttgcagacacgtatggccgtggagtg
atcatcactggccttccctatcctccgagaatggaccccagggtggtgctgaagatgcag
tatttggatgagatgtgcaaaaacaaaaccagcggtgtaaagtatctgtctgggaacgag
tggtacaggcagcaggcctcccgcgctgtgaaccaagctatcggtagagtgatccgccac
cgcgaggattacggtgccatctttctttgtgactacaggttcaaaaatttggatgtacga
cagcagctcccttcttgggtcagaccttacgttcgaacttatgaaaactttggcaccgtg
gtccgtgatgctgcacagtttttccgggttgcacaaaagcttaggcctgtgccagagaag
aagatgaaaggtacagggtgtgagagccagacagctaaagccaccagccagtcaagtcca
gggtgcagtcgttcagctcagagtgcctgggagtgcagttcctctctcaaagccaaagtg
ttcgactctcatgtgccaagtctaaagaggaggaaactgggcgagcacttggagagagat
gggacagccaggctttgcatccagtacgagatggagatgagttccagtaagaacagaccc
atgagcctgcttgatgctctggatgaaagcgaccctaatcgagatgaggatgataccttt
gttggggaggagaaggccagccgtttgtccacattatctctacaacatgataagcgcatg
gatgatgaatcgaggggagggaaacgcaaaatcagagtagtgcaagaccggaaacccata
gactccagcgcagcaggcaaaggcaaggcctttatgctggagctgaagagaagtttaagt
ctggagagcttcacgcagatcatgcatgcacttcaggtgtacaaggccacagataacctc
aatgaccttgtggcaaaagcagcagaccttctcatacaagatcccaacacacacatcctg
ctgagaggactctaccagtttgttcggccacaccacaagaagcagtttgatgagaagtgt
gagctccttacaggcaaaggctgtggttacaaacctgagcactcactctctagggaggag
agagcattactcatgaaacaaacagccaaagtggagacttctgaaatgtgcacaaccact
caactagactcaagcaggcagctcaatcaaggtggatctcatctgggaacgcataatttg
tgtggaatggatgcaagtgggaaggatcagaagctacaacagtcaggcaaagagagtcaa
ttcagtgcttccctgctgtctgatataaaaaaggctattggtgctgagaagacaaatcag
ctttttgtagcgttgcaaacgtacaagaaaactaatgattatgaacagatggtatcaaca
gttgtggggttgctgactgagcgtgatgaagacattattcttctaaaacgcttaacagct
ttcattccagctccccatcgtcagcagttctctgagatgttaatatccttgactgggagt
gtttcaatgccttgccaggattcagatgaggtttctagtcccccaatttcagtttcacag
ctctgtgcaggaaaatcacaaagcaagatatcgtccttcttctcctga
DBGET
integrated database retrieval system
