Pangasianodon hypophthalmus (striped catfish): 113532492
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Entry
113532492 CDS
T05759
Symbol
rrp8
Name
(RefSeq) ribosomal RNA-processing protein 8
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113532492 (rrp8)
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
113532492 (rrp8)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113532492 (rrp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
CTD12
Motif
Other DBs
NCBI-GeneID:
113532492
NCBI-ProteinID:
XP_026779672
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MFAEEEWTDNMPAEEQADSVVRAEPLVRKHKAISRHCLKRTLQTLGSAPDWECIKTSPGS
DEETEEAPVHLFKKKKKQRCKKQKKTSSTGIEGDMGRETDILQKPVKKRQVKLTVDTANT
GRSSKKLYKAVEDSTDERLSRQQWKNKMKNKRRCKNKFLLSSAIADLKLEEKLRQVQDLS
VAGKMQNDDSSLWRMASEEKNDNVNLSTDTSEKAQTITKKVNKDTHQLTPIKPVSNGLKT
TAYNQCEKQRPVKVDKKSWLQAKKLQRFLNIHVTESNEKLSDSNLEQEKDFKNVSECQVD
RSSALRSRMEKQLQSARFRYINELLYTSTSGEAQHIFKQDPDAIKIYHRGYTEQVKRWPA
NPVDSIIIYIQQRSSSLVIADFGCGDCKIARSVKNKVHCFDLAPVCDLVTACDMANVPLG
DSTVDIAVFCLSLMGTNLADFLAEANRVLVMGGVLKVAEVASRFDNIRQFTGALSRLGFK
LVSKDTDNSHFYSFEFLKTHNVPNDVRKIGLELKPCLYKKR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggaggaatggactgataacatgccagctgaggaacaggccgactctgta
gtgagggctgagcctcttgttaggaagcacaaggcaatcagcaggcactgccttaagcga
actctccagaccttggggtcagccccagactgggaatgtataaaaacttctccaggtagt
gatgaggaaacggaagaagctcctgtacaccttttcaagaagaagaagaaacaaaggtgc
aaaaaacagaagaaaacttctagtacaggaattgaaggagacatgggcagggaaacagac
atactgcagaaacctgtgaagaaacgacaagtgaagcttacagtggacacagccaacact
ggaagaagttctaaaaagttgtataaagcagtagaagattctactgatgaaagattgagc
cggcaacagtggaagaataaaatgaagaacaagaggcgatgcaagaataaattccttctc
agttcggctattgcagatcttaaattggaggaaaagttgaggcaggtgcaggacctctca
gtagcagggaaaatgcagaatgatgattcgtcactttggagaatggcatcagaagagaag
aacgataatgtaaacttgagtacagacacatctgaaaaagcccagactattacaaaaaaa
gtaaacaaagacacacatcagttaacacctataaaaccagtctctaatgggttgaagacc
actgcatataatcagtgtgaaaaacaaaggcctgtcaaagtggataaaaagtcttggctt
caggctaagaaattgcagcgttttttaaacatccatgtcactgaaagcaatgaaaaacta
agtgattcaaatcttgaacaggaaaaagatttcaaaaatgtcagtgaatgtcaagtggac
cgctccagtgccttaaggtcccgaatggagaagcagttacaatcagcccggttccgctac
ataaatgaactgctttacacatcaacaagtggtgaggcccaacatatatttaagcaggac
cctgatgccatcaagatttaccatagaggctacactgaacaagtgaaacgctggcctgca
aacccagtggattccatcatcatctatattcagcaaagatcgtcatctttggtaatagca
gactttggctgtggagattgcaagattgcacggagtgtgaagaacaaagtgcattgcttt
gatctggctcctgtatgtgaccttgtcactgcctgtgatatggcaaatgtgccacttggt
gactccacagttgatattgcagtcttttgtctctcccttatggggaccaaccttgcagac
tttttggctgaggcaaacagagttctggtgatggggggtgtcctcaaagttgcagaagtt
gccagcaggtttgataatatacgccagttcactggagccttatctcgtctgggctttaag
ttggtcagtaaggacacagacaacagccacttctactcctttgagtttctgaagacacac
aatgttccaaatgatgtaaggaaaatagggcttgaactcaagccttgtttgtacaagaaa
cggtag
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