Pangasianodon hypophthalmus (striped catfish): 113532768
Help
Entry
113532768 CDS
T05759
Name
(RefSeq) neural cell adhesion molecule 1-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
phyp04514
Cell adhesion molecule (CAM) interaction
phyp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
113532768
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113532768
04517 IgSF CAM signaling
113532768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113532768
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113532768
04090 CD molecules [BR:
phyp04090
]
113532768
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113532768
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phyp00537
]
113532768
04091 Lectins [BR:
phyp04091
]
113532768
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
113532768
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
NCAM1/2
113532768
CD molecules [BR:
phyp04090
]
Proteins
113532768
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
113532768
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phyp00537
]
Others
113532768
Lectins [BR:
phyp04091
]
I-type lectins (Siglecs)
113532768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
Ig_PDGFR_d4
Ig_6
C2-set_2
C2-set_3
C1-set
Fn3_VIN3
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
113532768
NCBI-ProteinID:
XP_026780170
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MRDKRVMAMFLNKEIILIFLFLGNAASLQVSITPAQGEVSVGESKFFLCEVVGAVKGIDW
FSPSGEKIESNRQDITVIRNDDTSSTLTIYNANIENAGTYKCVATSGDQQAEATVNVKIY
QKITFKNSTSPQEFTEGDDAVIVCDVISSPPPTVMWKHKRAKIQFDKDVRFKILDNNHLQ
IRGIRKADEGVYTCEARIMARGEIDFRDIRVVVNVVPTIRVRQAEVNATADISHSAMLAC
DADGFPEPTITWTRSLRSEVLLESGDKYSFNEDGSEITIMDVKKLDEGDYTCIARNKAGT
SEEEVSLRVFVKPKITYLENQTTTEMEEQIRLTCEATGDPTPSITWSFGTHVFAEGEQEH
LKRIYQASWTRPEQHKSEDGSVVARSDARVSSLTLKYVQYTDAGQYLCTASNAVGQSSQS
TFLEVRYAPKILGSVAVYTWEGNPANISCEILAHPSDVSIMWLRDGLQLPNANSTNVKIY
TTPTASYLQVNPDSQNDFGSYNCTASNEIGTESKEFILIQADVPSAPTITRVEPYSSTAE
VLFDEPEASGGVPVLKYRAEWRAASKSNWVQRVYEVREGLSAVTITGLKPDTKYEVKVSA
INGKGEGESSSIVTFKTEPVQGEPSPPKLEGALQSKGNALKVKWIKQDDGGSPITHYLIR
YKAREDLAWKDELRVPSTSGHVLLSGLDWNTEYDVMVVAENQQGKSQPGSLNFRTSSEPS
TTPDYMEDGPGLSTGLIVGILILVCVVLLLAMDATCCFVNKCGLLMCLCGKPGTGPKGKD
VEAGKAAFVKDDSKEPIVEMRTEDGLTANHDVGGHAEPNETTPLTEPEQQTEVVSTVVDL
PLSLATNSDTVTDTFDLSQSSPVSESTTLTSSLTAPPSEPKSTPKTSSQPLDTSLLSSDA
PLVDLADSQTSIQSAGQIKSTELDTQAPPSLALSTEKEARDLEAEPMLLGSPCEPRTLVT
NPQTSGAPPSSEDLELQIDGGASLTHFPQDGLHSLATAASTDPSAPQNEKILEEDEIRAE
EDKLKKVQPEALAEPNAVSQTNASESKA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagggacaagcgagtgatggcaatgtttctgaacaaggagatcatcttgatatttctt
ttccttggcaatgcagcctctctacaagtgagcattacgcccgcgcaaggagaagtcagc
gtcggagagtccaagttctttttgtgtgaagttgtcggtgcagtgaagggaatcgactgg
ttctcaccgagcggcgagaagatcgaatccaacaggcaggacatcacagtgatccgcaat
gatgacacatcctctacgctcactatctacaatgctaacattgagaatgccggcacgtac
aagtgtgtagccaccagcggagaccagcaggctgaggccacagtgaacgtgaagatatac
caaaagattaccttcaaaaactccacatcaccacaagagtttactgagggggatgacgcc
gtcattgtatgtgatgtgattagctccccaccacccactgtcatgtggaaacacaaaagg
gcaaaaatccagtttgataaagatgttcggttcaaaattttggacaacaaccacctgcag
ataagagggatcagaaaggcagatgaaggagtgtacacctgcgaggcccgcattatggct
cgaggcgagattgacttccgtgatatcagagtcgtagtgaacgttgttcccactatcaga
gtgcgacaagccgaggtgaacgccaccgctgacataagccattctgccatgctggcctgt
gatgcagacggcttccccgaacccacaatcacatggacgcgttctctcaggagtgaggtt
cttctggagagtggggataagtacagcttcaatgaagatggctcagagatcacaataatg
gatgtgaagaagctggatgaaggagattacacctgcattgctaggaacaaagctgggacg
agtgaagaagaagtcagcctcagagtttttgtgaaacccaaaatcacatacttggaaaac
cagaccactacagagatggaggagcagatcaggttgacgtgcgaagccacaggagaccca
acacccagcatcacgtggagcttcggtacacacgtctttgccgaaggagaacaggagcat
ctaaagaggatttatcaggcatcttggactcgacccgaacaacacaagagtgaagatggg
agtgtggtggctcgcagtgacgctcgtgtctcctctctgacgctaaagtacgtccagtac
accgacgctggacagtatctctgcacggccagcaacgccgttggccagagctcccagtcc
acgttcttagaagtgcgctacgcaccaaaaatcctgggctcagtggcagtctacacgtgg
gaggggaatcctgccaacatcagctgcgagatcctggctcaccccagtgatgtgtctatc
atgtggctgcgagatggactccagctacccaacgccaactccaccaatgtcaaaatctat
accacccccactgccagctacctgcaggttaacccggactcccagaacgactttggcagc
tacaactgcactgcttctaatgagatcgggactgagtccaaagagttcatcctgattcag
gctgatgttccctcggctccaaccatcactcgggtggaaccctactcaagcacggctgag
gtactgtttgatgaacctgaagcttctggtggagttcccgtgctcaagtaccgtgccgag
tggagagcagcgagcaaaagcaactgggtccagcgcgtctatgaagttcgagaggggctg
agtgcagtcacaatcacaggcttaaaaccagacacgaagtatgaagtcaaggtgtctgct
atcaacggcaagggagaaggcgagagcagctctatagtcaccttcaagacagagcctgtt
caaggggagcccagtccccctaaattggagggagccctacagtccaaaggcaatgcactt
aaagtcaagtggatcaagcaggatgacggaggctcgcccatcacacactacctcatccgg
tacaaagctagagaggatttggcctggaaagacgagctccgtgtcccgagcacaagtgga
cacgtcctcctcagcggcctggactggaacactgaatatgacgtgatggtggtggccgag
aaccagcagggcaagtcgcagcctggctcattgaactttcgcacgtcctctgagccctcc
accaccccagactacatggaggatggcccaggcctgagtacagggctgattgttgggatc
ctcatcctggtgtgtgtggtcctgttgttggccatggacgccacctgctgcttcgtcaac
aagtgtggcttgctaatgtgtctctgtggcaaacccgggaccggtccaaagggcaaggat
gtagaggcaggaaaggctgcatttgtgaaggacgactccaaagagcccattgtagaaatg
aggactgaggatgggctcacagccaatcacgatgtagggggacatgctgagccaaatgag
accacgcccctaactgagccagagcaacagacagaagtagtgtctactgtggtggactta
cccctgtccttggccaccaactcagacacagtcactgacacatttgacctgagtcagagc
agccctgttagtgagagcaccactctcacgtccagcctcacagctcctccttctgagccc
aaatccacccctaaaacctcctcccagcccttagacacttcactcctctcatctgatgct
cccttagtcgatctggctgattctcagaccagtatccaatcagctggtcagattaaatct
acagaactcgacactcaggctccaccttctcttgctcttagcacagagaaagaagccaga
gatctggaggcagagccaatgcttttaggaagtccatgcgagcccagaacgcttgtcact
aatccacagaccagtggtgctcctccctcctctgaggatcttgagctccaaatagatgga
ggtgcctcactaacacatttcccacaggatggcttacactctctggctacagctgcctct
actgacccatcggctccacaaaatgaaaaaatcctagaggaggatgagattagagctgag
gaagacaagctgaagaaggtccagccagaagcactggcagaaccaaatgcggtatcgcaa
acaaacgcctctgagagtaaggcatga
DBGET
integrated database retrieval system
