Pangasianodon hypophthalmus (striped catfish): 113532893
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Entry
113532893 CDS
T05759
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113532893
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113532893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113532893
Spliceosome [BR:
phyp03041
]
Common components
Common spliceosomal components
SR proteins
113532893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
113532893
NCBI-ProteinID:
XP_026780399
LinkDB
All DBs
Position
Unknown
AA seq
242 aa
AA seq
DB search
MSGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFE
DPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGAPRGRYGPPSRRSEYRVIVS
GLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE
TAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNERSRSYSPRRGRSSPQYSPRHSRSRS
RS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagtgatccgaggcccagctggtagcaacgactgccggatttatgtaggaaac
cttcctcctgatatccgcactaaagacgtcgaggacgtgttctacaagtacggagcgatc
cgagatatcgatctgaaaaaccgacgaggtggccctccgtttgcctttgtcgagtttgaa
gaccccagggacgccgaggacgcggtgtatgctcgggacggctatgactacgacggctac
cggctccgggtggagtttcccagaagtggacgcggtatggggagaggaggcttcggtgga
gctcccagaggcagatacggacctccatccaggcgatctgaatacagagtcattgtttca
gggttaccacccagcggcagttggcaagatctgaaggatcacatgcgtgaagcaggtgat
gtatgttatgctgacgttttccgagatgggaccggtgtggtggagtttgtgcgcaaagaa
gacatgacctacgctgttcgaaaactggataacactaaattccggtcacatgagggggaa
accgcatatatccgtgtgaaagtggatggtccacgcagtccaagttacggaagatcaagg
tcccggagccgcagtcgcagcagaagtcgcagtcgcagcaacgagcgtagccgcagctac
tcgccgcgccgtggccgaagctccccacagtactccccccggcacagccgctctcgctct
cgttcctaa
DBGET
integrated database retrieval system
