Pangasianodon hypophthalmus (striped catfish): 113532898
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Entry
113532898 CDS
T05759
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113532898 (polrmt)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113532898 (polrmt)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
113532898 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
113532898
NCBI-ProteinID:
XP_026780408
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MSLLRLCAFPKYLSGKFMFERSARFTLNVDHCQICLRLRNNCERGTRDNPWTTLHQRHYS
AIPKKEDGKRRVWEQSHLLDVLEARMQQLQSDVLHVNHLKVEFVKMPQGEKRATPVKSQK
TVAETPKAVQSTKKDATSDNSPSKTHTSRWIEKLKLEKSNKTKKQSSLQQKLRDKTTAAA
KSSKGNLMAPGTSMKTITTAKRSKQAKPESTAGPTPQSKHLKPKVSKRSTSATTVKEDPE
ELSRAEELAEVEELEEMIGEWSPTNAEKLLEDKDGNRYGDAQLNLRCYLEACVFTGDVER
AQRCLFFHHRHLSKRKTLSISAYNIMMRMWAKKGSVNHIGRLFVLVEEAGLKPNLVSYAT
ALECMGRNPETSSRTINRCLQQMAESGLCLDDMFRQCVFRQDERDMVLKAIRTVQPDYEP
HSPTERLHCSLPLAESFYTQREETSYPKLDFSVAELQERFRRQLAMEQANTITIDSVEAI
KPVTEHMARMRKLLAEQHSHWHKALLQALRESRMVLGSSNQRNWKISIYPFLRILRDEDY
VNIMLQGLASLPPSGESLLFLAKELGNRVHNVYCIQQKSHSQIVEKLGNIYNSYVKLLGK
DTEPSNVLPREQWSTMEAERTAGPSLLSDDTPWPHMLVIQLGSFLVDLLVRELKIPNNIL
NPTLENKLIPVLYHMYTFRSNRQIGFIKPHPILTQIQSEAMETKLTFDSYVMPMLCPPVP
WTSAKSGAYLLTPTKLMRSVEGAIQHQLLLEKRQDEELHAVLDSLSQLGNCAWRINKPLL
DIIISIFNDKGSEKLDVPPPISEAPEIPRFNPHDPAYTPAEKAHLKREATRAKKKVAEMH
SLRMDALYKLSIANHMRDEIFWFPHNMDFRGRTYPCPPYFNHLGSDVTRAILLFAEGKPL
GPKGLDWLKIHLVNLTGLKKRSSLAGRLEYANSIMDDILDSADNPLMGRKWWMNADEPWQ
TLACCMEIANASRSHDPTQFISHFPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCEEPQ
DVYSGVAQQVEEFRARDAAKGMKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKR
LKEIDDFPKEYIWDASHYLVHQVFSSLKEMFTGTREIQDWLTESARLIAKSGSTVEWVTP
LGLPIVQPYHRTRNHVLKSNIQFLSLQISHDVYERPDTVKQKNAFPPNFIHSLDSTHMML
TALNCYSAGLTFVSVHDCYWTHALSVDIMNKVCREQFVALHSQPILQNLSKFLLQKYCSG
PPGNTKSKKFLEYWKMSQLLGKVPETGDFDLQRVKESTYFFS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttaagactgtgcgcttttccgaaatacttgagcggtaaattcatgtttgaa
agaagtgctcgttttacattaaatgtcgaccactgtcaaatctgcctcagactccggaat
aactgcgagagaggaacaagagataacccatggacaacactgcaccaaaggcactactct
gcaattccaaagaaggaagatggaaagagacgagtgtgggaacagtctcatttgttggat
gttcttgaggctcggatgcaacagttgcagtctgatgttttacatgtaaatcatttgaag
gttgagtttgtcaaaatgccacaaggagaaaaaagagccactcctgtgaagagtcaaaag
acagtggcagaaactcctaaagctgttcagtccactaaaaaagatgccacgtcagataac
tcaccctccaaaacacacacgagccgctggattgaaaaactaaagcttgagaagtcaaac
aaaactaaaaaacagtcgtctctgcagcagaaactccgtgacaaaacaacagcagcagcg
aaaagcagtaaaggaaatctgatggctcctggaacatccatgaaaacaatcactactgcc
aaaaggagcaaacaagccaaacccgagtccacagcgggtccaacgcctcagtccaaacac
ttaaaaccaaaggtgtctaaacgtagtacaagtgcaaccacagtgaaagaggatcctgaa
gaactttccagagctgaagagctggctgaagtcgaagagctcgaagagatgatcggtgag
tggagtccaacgaacgccgagaaacttctggaagataaagacgggaaccgttatggcgac
gcgcagctaaacttgcgctgctacctggaggcatgtgtttttacgggtgatgtggagcga
gcgcagcgctgcctgttttttcaccaccggcacctaagcaaacgcaaaacactctccatc
agcgcctacaacatcatgatgaggatgtgggccaagaagggatctgtgaatcacattggt
cgcttattcgttctggtggaggaagcaggcctgaagcccaacctggtgtcatacgccacg
gctctggagtgcatgggccgcaatcctgagacctcttcacgcaccattaacaggtgtctg
cagcagatggctgaaagtggcctgtgtttggacgacatgttcagacagtgtgtattcaga
caggatgagcgagacatggtgctgaaggccatccggaccgtacaacccgactatgagcca
cactctcctactgaacggctgcactgctcattaccactggcggagagcttttatacacag
agggaagaaaccagctatcctaagctagactttagtgtggctgagctgcaggagcgcttc
aggcgtcagctggctatggagcaggccaacaccatcaccatcgactctgtggaggccatt
aaacctgtcaccgaacacatggccaggatgaggaagctgttagctgagcagcactctcac
tggcacaaagcgctgctacaggctctgagagagagccggatggttttaggcagcagcaac
cagaggaactggaagatcagcatttacccattcctgcgcatccttcgcgatgaggattac
gtcaacatcatgctgcagggattggccagcctgccacccagcggagagtctctgctattc
ctggctaaggaactgggcaacagagtccacaacgtgtactgcatccaacagaagagtcac
agccagatagtggagaaactgggcaacatctacaactcatacgtgaaactgcttggaaaa
gacacagagcccagcaacgtgttgccacgggagcaatggagcactatggaggcggagcga
actgctggcccctccctcctgagcgatgacacgccctggccgcacatgctggtcattcag
ctgggcagcttcctggtggatctgctggttcgcgagctcaaaatcccgaacaacatcctg
aaccccaccctggagaacaagctcatccctgtgctctatcacatgtacacattccgcagc
aatcggcagattggttttatcaagccacacccaatcctgacccaaatacagtcagaagcc
atggagaccaagctgacctttgactcgtatgtgatgcccatgctgtgcccaccagtgccc
tggacatcagccaagagtggagcttacctgctaactcccaccaagctgatgcgctcagtt
gagggtgccatccagcaccagctgctgctggagaagcgccaggatgaggaactgcatgct
gtgctggactccctcagccagctgggcaactgtgcctggagaatcaacaaacctctgttg
gacataatcatctccatctttaacgataagggtagtgagaagctggacgtgcctccaccc
atttccgaggcgccagaaatcccacgcttcaaccctcacgacccggcatacacgcccgcc
gagaaggcccacctgaagcgtgaggccacaagggccaagaagaaggtggctgagatgcac
agtctgcgcatggatgcactctacaagctgtccatcgccaaccacatgagggatgagatc
ttctggttccctcacaacatggatttccgagggcgtacttacccgtgcccaccttacttt
aatcatctgggaagtgatgtaaccagagccatcttgctgtttgctgaggggaagccgttg
ggtcctaaaggcctggactggttaaagatccacctggtgaacctcacgggtctgaagaag
cggagttcgctagctgggagactggaatacgccaacagcatcatggatgatatcctagac
tctgcagacaaccctttaatggggaggaagtggtggatgaatgctgatgagccttggcag
actctggcatgctgcatggaaatagcaaatgcctccagatcacatgaccccacgcagttc
atctcccatttccctgtacatcaggatggctcctgtaatggcctccagcactatgctgca
ctgggtcgtgacgtcattggtgcaacgtcggtaaacttaatgccctgtgaagaaccgcag
gatgtctacagtggtgtggctcagcaggtggaggagtttcgggcccgagacgctgctaag
ggcatgaagattgcacaggtgctggagggcttcatcagcaggaaggtagtgaagcaaact
gtgatgacggtggtctatggggtcacgcgctatggtggccgactgcagatcgaaaagcgc
ctcaaggagatcgatgacttccccaaggagtatatttgggacgcctcacactacctagtg
caccaggtcttcagcagcttgaaggaaatgttcactgggacaagagagatccaggactgg
ctaactgagagtgctaggctaatcgctaagtctggcagcacggtggagtgggtgacccct
ctgggactgcccatcgtccagccctaccaccgcaccaggaaccacgtgctcaagagcaac
attcagtttctgagtctccagataagccatgacgtctatgagaggccagacacagtaaag
caaaagaatgcatttcccccaaacttcatccattctctggactccacacatatgatgctg
actgcactcaactgttacagtgctggtttgacattcgtatcagtgcatgactgctactgg
acccatgctctttcagtagacatcatgaacaaggtgtgtcgtgagcagtttgtggctctg
cacagtcagcccattctgcagaacctctccaagttcctgctgcaaaaatactgctcagga
ccaccgggcaacaccaagagcaagaagtttctggagtactggaagatgtcgcagctgctg
gggaaggttccagaaacaggtgattttgatctgcagagggtgaaggaatccacatatttc
ttcagttga
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integrated database retrieval system
