Pangasianodon hypophthalmus (striped catfish): 113532900
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Entry
113532900 CDS
T05759
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113532900 (vps53)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Others
EARP complex
113532900 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
113532900 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
FBF1
NBD94
GrpE
Syndetin_C
COG5_N
hAT-like_RNase-H
VPS51_Exo84_N
COG3_N
O_Spanin_T7
Sec8_N
ING
Motif
Other DBs
NCBI-GeneID:
113532900
NCBI-ProteinID:
XP_026780406
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MMEDEELEFVEDLDAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQMAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRNLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFDEAFPAQGSKRPGGPSIVLRD
ACLVASVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRARAREIEVKLLLFAIQRTTNFEGLLAK
RFSGSTLSNGPGKRPETPLEPTNPFLEDESGEDNVSEKDEDLVRPKKPKTPENPFHGIVS
KCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTEEGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTISSLLKEKEGSEVA
KFTTEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLTGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLAATRKY
FTQFCIKFINSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKILDMKGLKRSE
QSSMLELFRQRLPTPPSGPDTGPTMSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatgaagaattagaatttgtggaggatttggacgcaattttacaccttacc
ccagaagtgcagctggccatcgagcaggtgtttcccagtcaggatccactcgatcgagct
gatttcaatgcagttgaatacatcaacactttgtttccaactgagcagtcactggcaaat
atagatgaagtggtgaacaagattcgcctgaaaatcagacggctggatgacaacatcagg
acggtggtgaggggacaaactaacgtgggacaggatggcaggcaggctctggaggaggct
cagatggctatccagcaactgtttggcaaaatcaaagacatcaaggacaaagcggagaaa
tcggaacaaatggtaaaagagatcacccgggacatcaagcagctggaccatgcaaaacgt
aacctaaccacgtccattactactcttaatcacctgcacatgctagcaggaggtgtggac
tctctagaggccatgacacgcaagaggcagtatggagaggtggccaacttgctccaggga
gtggttaacgtgctggagcacttccaaaagtatatgggcatccctcagatccgccaactg
tctgaaagagtgaaagcagcacaaagtgaactaggcacacagatcctagctgactttgat
gaggcttttcctgcacagggctcaaagaggcctggaggccccagcattgtgctcagagat
gcctgtttggtggccagtgtcctggatcctcgcattaagcaagaaataatcaagaagttt
attaggcagcatctctctgagtaccttgtgctctttcaagagaaccaggatgtggcatgg
ttagataagattgaccggcgctatgcatggataaagcgtcagctagtggactatgaggag
aagtatggccgcatgtttcctgaagagtggtgcatgaccgagcgtatcgctgtggagttc
tgccatatcaccagaactgagctggccaagctgatgcgagctcgtgccagggagattgag
gtcaagctcttgctctttgctattcagaggaccaccaatttcgaggggctgctggctaag
cgcttctcaggcagcaccttgagcaacggcccagggaagagacctgagacgcccttggag
cccactaacccctttctggaggatgagtcaggagaggacaacgtttctgagaaggatgaa
gatctggtcaggccgaaaaagcctaagaccccagagaacccgttccatggcatcgtttcc
aaatgtttcgagcctcatctctatgtctacattgaatcacaggacaagaacctcggggag
ctgattgaccgctttgtggctgatttccgagcgcagggtccccctaagtcaggcacagaa
gaagggggagctgtgttgcccagctgtgcagatctttttgtatactataaaaagtgcatg
gtgcagtgctctcagctgagcacaggagagcccatgattgccctcactaccatcttccag
aagtacctgcgcgagtatgcctggaagatcctgtctgggaacctgcccaaaacaagcagt
aacagtggaggtctgaccatcagcagtctgttaaaggaaaaagaaggttcagaggtggcc
aaatttaccacagaagagctctgtcttatttgcagtatcctcagcacagctgaatactgc
cttgcaaccacacaacagctggaggagaagctaaaggagaaagttgacaagtcgctcatg
gagaggattaatctaacaggagagatggacacctttagcactgtgatctccaacagcatc
cagcttttggttcaggatctggatgctgcatgtgacccagccctcacagccatgagcaag
atgccatggcagagtgtggagcatgttggtgaccaaagcccctacgtcacgtctgtcatc
atgcatatcaaacagaatgtaccaatcatcagagacaacctggctgccacccgcaaatac
ttcacccagttctgcatcaagttcatcaactcctttatcccaaagttcatcaaccacttg
ttccggtgtaaacccatcagcatggttggagctgagcagcttctattggacacacactct
ctgaagacggttttgttagacctcccatccattggctctcaagtccttcgcaaagctcca
gcgagttacactaaaatagtggtcaaagggatgactcgtgccgagatgattctaaaggtg
gtcatggcccctcatgagccttcagtggtctttgtggataattatatcaagcttcttgct
gatggcaacccagagactttccagaaaattctagacatgaagggactgaagcgcagtgag
cagagcagtatgctggagctcttcagacagaggttacccactcccccctcagggccagac
acagggcccactatgtccttcagcgccccaacccctgagcaggagtcctcccgcatccgc
aaactggagaaactgatcaaaaaacgaattcagtga
DBGET
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