Pangasianodon hypophthalmus (striped catfish): 113532987
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Entry
113532987 CDS
T05759
Symbol
wdr6
Name
(RefSeq) WD repeat-containing protein 6
KO
K24737
WD repeat-containing protein 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113532987 (wdr6)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
113532987 (wdr6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
SHKBP1_KCTD3_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
113532987
NCBI-ProteinID:
XP_026780559
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MAASDSLTVLQSSALVAPVTALEFLGDDCLLAGEGPILSIFCLQASPTQCASLSVLHNYR
IHGIRPKLQNNNGHVTVPELVELVIFGGKAVRLINVRPCGLSLEVAGPLLELQDWVLDIS
WLRGETESLLGICLAHNSVLLLKPQSGNIVSLCSCVEVCLLYSALLIGPSWETSVLVGGT
VFNQLVLWRPGGTKADSQSQVERRLLGHSGVIFSLCYLQSSRWLASASDDRSVRVWNVGV
LGADGGCGVESPTCLRVLYGHQARVFCVRLLPGWVFSAGEDGTCLLWDWEGNGRVGRTLK
GHRSGGIRALAVSKGGGWVATGGADGGIQAWRVLEGTRQVKQSNEGDSQIDLGFSGRGCP
KVVRSVGGHDAVLVCTDRGEVFLHQDKSWQTVWNSGPEFQSYCVMEVTHVQYQSASLCVC
AVGNLNGGVQVFALHHPNSGILLQAGQGKVHALQWVEGDHLCLLASGAEGLVYRWTIEVE
EDETGLGLRSEELKSFLLPLCANRWLTAAVRLPQGKGSLWVCGDRRGSLLLYRERELSGE
SEVARQNREGGSEEEQGVLRDENKWTESATSDTATPISPVNTLFGVHGKQGVTSVCEHQG
LLYSTGRDGCVRVLTVYSNTLKVRRVHRASKGMEWLEKVLFLGSDISDMYEVNKRSKQED
SEEEERSITEGVLENLGVGRKERDGLKEEPELKKSMGNKLDDGGSESVAEAHFVMVGFHS
IQFVLWDPLRRETLFSAACGGGHRSWAYISPSHTQMLPSSHSLGQGTLIFIKQGAVMASC
SLTSKATHVRGHTLKEGLHGRGLSCICHLGSVSRGRASSEEWEVLVTGGEDTTVTVLAVE
PGHGMVKVLTVLADHISNVRTLTAVQREPRQEGNGDMRTNTSSSFSTLLFSAGGRAQLQC
YRLLIGWNEQVNWPVCQVTQVAGHRLDEQWERRRNRHKTVKMDPETRYMSMAVVHESIEE
ILLTLACSDGAVRLFTVREDSRKVELLWENFYHQRCVLSVASYSLEDPQGKQHVLLFSGA
TDGAIALWDLTTVLDSKSKDSCHGPSAPCFSLPVHQSGVNTLVISKEAEKMDKDIITVAS
GGDDGQLSVMKIRVQPHQEVVFPELLAHWTVTLAHSAPLTALSALNCATLVSASPDQRVC
VWHVCCDGLRHQATVFSHTADAAGLWAWHKKGSELQSGDYVVVCGQGLQLLKLTEGKDPE
RTRKEEERQKVIFANRFVRV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatcagacagtttgactgtcctgcagagctctgcgcttgtggcccctgtcact
gctctggagtttcttggagatgactgcttgttggcaggtgagggacccattctctccatc
ttctgtctccaagcttcacctacgcaatgtgcttcacttagtgttctgcataactatcgt
atccatggaatacggcccaagctgcaaaataacaatggtcatgtcactgttcctgaactg
gtggaactagtcatttttggcgggaaagcagtgcgtcttattaacgtcaggccttgtggc
cttagtttggaggtggctggccctctgttggagctccaggattgggtgctggatatttct
tggctaagaggagagactgaatcattactaggtatatgtctggctcacaactctgtgttg
cttttaaagccacagtctggaaacattgtgtccctctgctcgtgtgtagaggtgtgcctt
ctctactctgcacttctgattggtccaagttgggaaacatcagtgctggtaggggggact
gtcttcaaccagctggtcctgtggagacctggagggaccaaagcagacagtcagtcccaa
gtagagagacgcctgctggggcacagtggtgtgattttcagcctgtgctacctccagagc
tccagatggttggcttctgcctcagacgatcgtagcgttcgtgtgtggaacgttggtgta
ctgggcgcagatggagggtgtggagtagaatcacccacatgcctgcgagttctctatggg
caccaggctcgtgtattctgtgtcagactcttacctggctgggtgttcagtgctggggag
gacggtacctgcctactgtgggattgggaagggaatggtagagttggtcgaacattaaaa
ggtcatagatctggtggcatcagagcactagctgtgagtaaaggaggtggatgggtggct
acaggaggggctgatggaggaatacaggcatggagagttttggagggaaccagacaggta
aagcaaagcaatgagggtgatagccagatagatttgggcttcagtgggcgaggttgtcct
aaggttgtgcgttcagtaggaggccatgatgctgtgcttgtttgcactgatcgaggagaa
gtgtttttgcatcaggataaatcatggcagacagtttggaatagtggtccagaatttcag
tcctactgtgtgatggaagtaacacatgtccaataccagagtgcctctttgtgcgtgtgc
gcggtaggtaatcttaatggaggggttcaggtgtttgcactacaccatccgaattcaggt
atattactgcaagcaggccaggggaaggttcacgctttgcaatgggtggaaggggatcat
ttgtgtctgttggcttctggtgctgaaggactggtatatagatggacaatagaggtggag
gaggatgaaacaggcctaggtttaagatcagaggagctaaagtctttcctgttgcctctt
tgcgcgaatagatggctcactgcggcagtcaggctgccacaaggaaagggatcactgtgg
gtgtgtggagaccgccgtggttcactgctgctctacagagagagggaattaagtggagag
agtgaagtagctagacagaatagagaaggagggagtgaggaagagcaaggagttttgagg
gatgagaacaaatggactgagagtgctacgagtgacactgctactcccatttcccctgtc
aacactctgtttggtgtccatggaaagcaaggtgtgacaagtgtatgtgagcatcagggt
ttgctttatagcaccggtcgggacgggtgtgtgcgggttctgacagtatacagcaacaca
ctaaaggtgcggcgtgttcatcgtgccagcaaaggaatggagtggctagaaaaggtcctc
ttcctgggttctgatatatctgacatgtatgaggtcaacaagagaagcaaacaggaagac
agtgaggaagaagagaggagtataacagaaggagtgctagagaatttaggggttggcaga
aaagagagagatggattgaaggaagaaccagaattgaagaaatccatgggaaacaaattg
gacgatggtgggagtgaaagtgttgccgaggcccattttgtaatggttggcttccactct
atccagtttgttttgtgggatcctttgagacgagagacacttttctcagcggcatgtgga
ggaggacacaggtcctgggcttacatttctccttctcacactcaaatgctcccatcctca
cacagtctcggacaaggtacactgatcttcatcaagcaaggagctgtcatggcttcttgt
tcgttgacttctaaagcaacccatgtgagaggacacaccctgaaggaaggacttcatggc
cgaggcctgagttgcatttgccaccttggtagtgtatccagaggcagagcatcatctgag
gagtgggaggtgctagttacaggtggggaggacaccacagtgacggtgcttgcggttgaa
cctggacatggcatggtgaaagtgctcactgttttagctgaccacatctcaaacgttcgg
acactgactgcggtccaaagagaaccgagacaagaaggaaatggtgacatgaggacaaat
acatcttcttcgttctcaacattgctcttttctgctggtgggcgggctcagctgcagtgc
taccggctcctgattggatggaatgagcaggtgaactggcctgtttgtcaggtgactcag
gttgctggtcacagattggatgagcaatgggagagaagacggaatcgccacaagactgta
aaaatggaccctgagacaaggtacatgtcaatggctgtggtgcatgaaagcatagaggag
attctcctgacacttgcctgcagcgatggagcagtaaggcttttcactgtgagagaggac
agcaggaaggttgagctgctctgggagaatttttaccatcagcggtgtgtgctcagtgtt
gcctcttatagccttgaagacccacagggcaagcagcatgtgttgttgtttagcggggct
acagatggtgctatagctctgtgggatctgactacagtgttggacagtaaatccaaggac
agctgtcacggtccatctgctccttgcttctctctccctgttcatcaaagtggagtaaac
acccttgttatatctaaagaagcggaaaaaatggacaaagacattatcactgtggctagt
ggtggagatgacggacagctgtcagtaatgaagattcgagtacaaccccatcaagaggtc
gtgtttccagagctgctcgctcattggacagtaacattagcacactctgccccactaact
gccctgagtgctcttaattgcgcaacactggtgtccgcgtctccagaccagcgtgtgtgc
gtgtggcacgtgtgttgtgacggacttcggcaccaagcgacagtgttctcacacactgca
gatgctgcgggactgtgggcgtggcacaagaaagggtcagaattacagagtggagactac
gtggtggtttgtgggcagggcttgcaactcttgaagttaacggagggaaaagacccagag
agaacaagaaaagaagaggaacgacagaaagtgatatttgcaaaccgttttgtcagagta
taa
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