Pangasianodon hypophthalmus (striped catfish): 113533044
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Entry
113533044 CDS
T05759
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113533044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113533044
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113533044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
113533044
NCBI-ProteinID:
XP_026780666
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEDNREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFTLNQSRVEEITMREEVGNISLMNDDHFGDFGIEDREILREETAFEDP
TFIHGPSASNLLLEAEPGPAHLPDKSTNLDYDDFGDNNLENSDGGILVDKLLSGDGGGGI
FDDPPAITDSVMMPPDHRDDDDDDYDHLSPAGAPDSPDSGPVEALPNTTDQTEQTTLVPN
EEEAFALEPIDITVKETKAKRKRKLIVDSLKELDSKTIRAQLSDYSDIVTTLDLAPPTKK
LMMWKETGGVEKLFSLPAQPLWNSRLLKMFTRCLTPLVPDELRKRRKGGEADSLEEFLKE
LENPEVPREEQLSHRPDIIDQTIVEEPSILHTSSVEGSRTALDETLMPPPSRQRGVKRKS
QEPEAALPTMSILDQSVPPPMEQSVLSQQLDMPQVDLPPEDSGNLSRIVPELDLLGEKNK
DKEDSEEEEEGEGQGGDQDQEERRWNKRTQQMLHGLQRVVAKTGAQSISLLELCRNNNRK
QAAAKFYSFLVLKKQQAVDLSQAEPYSDIIATPGPRFHIV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcccacttcgtcctcagcaagcgagggccgctggccaagatctggctggcg
gcccattgggacaagaagctgaccaaagcccacgtctttgagtgcaacctggagagcagc
gtggagagcatcatttcacccaaggttaaaatggctctgcgtacatctggtcacctgctc
ctgggggtggtgaggatctaccacaggaaggccaagtatctgctcgctgactgtaatgag
gcatttataaagatcaaaatggctttccgaccaggggttgtggatctgcctgaagataat
cgcgaggctgcttacaacgccatcaccctgcccgaggaatttcacgactttgatcagccg
cttcctgatctcgacgatatagatgtagcacagcagttcacgctgaaccagagccgagtg
gaggagatcaccatgagggaggaggtggggaacataagcctcatgaacgacgaccacttc
ggtgattttggcattgaggaccgggagatccttagggaggagactgcctttgaggacccc
acctttattcatggaccctctgcctccaatctcctgctggaggcggagcctggccccgcc
caccttcccgacaagtcgactaacctcgactacgacgactttggagataacaacctggag
aacagcgatggcgggatacttgtggataagctcttgagtggcgatggcggcggtgggata
ttcgacgatcctccggccatcacagacagcgtcatgatgcctccagaccacagagacgac
gacgatgacgactatgaccacctttcaccggctggagctccagacagtcctgattcaggt
ccggttgaggctctacccaacactacagaccagacggagcagaccacgctggtgcctaac
gaggaggaggcctttgctctcgagcccatcgacatcactgtgaaagagacaaaggcgaag
agaaagaggaagctgatcgtggacagcctgaaagagctcgacagtaagaccatccgcgct
cagctgagcgattattccgacattgttactacactggatctggccccacctaccaagaag
ctgatgatgtggaaagagactggaggggtggagaagctgttctctctgcctgcccagcca
ctgtggaacagcagactgctcaagatgttcacacgctgcctgactccactggtgccagac
gagctgaggaagaggaggaagggtggcgaggctgacagcctggaggagttcctgaaggag
ctggagaaccctgaggttccccgtgaggaacagctgagccacaggcccgacatcattgat
caaaccattgtggaggagcccagcatactgcatacttcgtctgtggagggcagcagaacc
gcgctggacgagaccctgatgccgcctccttcacggcagcgtggagtcaaacgcaagtcc
caggagcccgaagctgctctgcctacgatgagcatactggatcagtccgtgcctccgccg
atggagcagtcggtgttgtcccagcagctggacatgccacaggttgaccttcctccagaa
gacagcggcaacctgtcgagaatcgtgccagagctcgacttgctgggagagaagaacaag
gacaaggaggacagcgaggaggaggaggagggcgaaggacaaggtggagaccaggaccaa
gaggagagacggtggaacaagagaacccagcagatgctgcatggacttcagcgtgtggtg
gctaagactggtgcccagtccatcagcctgctggagctttgcagaaacaacaacaggaaa
caagccgccgccaagttctacagcttcctcgtcctgaagaaacagcaagcagtggatctg
tcccaagccgagccttacagcgacatcatcgctacgccgggaccgcgattccacattgta
tag
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