Pangasianodon hypophthalmus (striped catfish): 113533048
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Entry
113533048 CDS
T05759
Name
(RefSeq) myomesin-3-like
KO
K24495
myomesin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113533048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113533048
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113533048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
ig
Ig_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
Tissue_fac
Ig_6
fn3_2
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
113533048
NCBI-ProteinID:
XP_026780672
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MAAKRVTYRCQEEEKGQMSHSMELSSQIKKKKFKSSDEEASLSEFYPIIPGNIMSVKEIL
TEPKFPRHRTWEVLRETMDNDELRERDQWTMFGNEAEKVEIEVIRNQHMVRQRMDRMALR
KEAERKISTHLKFLDDLSMKTPDFSIPLRPHTVWEGMAVKLSCTVEGCPSPHVTWYKDGV
PLTASSQPWNYKLLQKYGLNMLEIRRCSVADAGEYKVVAKSSLGEATTYATLVVNSKRGL
EAGMKHTQAVVPVMEEEALFDTTFPPSYIKEGDTLTLSCRFTFPLLPFQQDVAWFRDGVP
LRASGRLDIHTTLRSSTLSLKGMHKEHEGLYTVRLRTRDGITEHSAYVYVKDGPAAVPGA
PGSPLHLKCSDVNRDYVFLSWEPPSADGAGPVQGYYIERCEVGTGKWLFCNELVQKLCHY
PVMGLKENTMYQFRVCAVNQAGVGRPSKLSKPIITSDPMEPSRTMVVKVDRGREIVITKD
QLESQIRVPFSPTDVRVCELSDTYVVMCWTEPDPRGKEPLTYFVERSIAGQESWHLASLD
MTINATRFAAYDLQKGVAYCFRVRSVNKYGISDPSEPSQPVSLGEALDVPAAPHCVQAIR
DTDRSILLMWKEPKSTEGILGYYLYCNELGSSEWRTINNKPVTSTRFLVHGLRTNKKYVF
RVKSVGRAGNSRYSDESEPILVQAAKFAPSAPSAISILHCTGTEMVIGWRAPVNNGGDPV
HGYYLDQREKSQSTWSEVNVKPVKERVYTVPGLLEGCYYQFRVIAANMVGVGKPSGPSEA
FLCEKWTMPEPGCPYDLELREVRQESLVLLWAEPLYQGQSQITGYVVEISEGEDSEDWTA
VTQEPITDTYLKVSGLKAGQTYRLRVCAINNAGVGRPSFPTDPIKAQADPATRDIEIGVD
NDGFICLSFEAPETLDQIQFEWKKNYKKAIDAGRAHLETKQNKSVLTFSAAAEEDLGLYT
AEVIGRPDISSSFNFTAEDLERLMELSWHIRNPLIALRSEGWQVDVSEQGNVRLWLQTEP
LSNAAELHMILNDREISSTPARKINFDKANGLVEILFDQLSKEDEGSYTAQLKDGRAKNQ
FTLVLVDEKFRQTLAKSQAKRRDWKRRSGPYFEEFLSWTVTEDCELIMKCKVTNMNKDTK
MKWFKDGGEITQFVYEPSGVSTFTVPQVTKKEAGVYRAVVADGRGEDESILELVDNEFER
LMQCLSRNCALSAGPMRIQCTAAGFKLYCSLKYYLSYMKTSWHFKERRIDQDERTKPGNS
MQKLWIEIFNPTENDKGKYTLEMFDGQETHKRSLDLSGQAFADALLEYQRLKQVAIAEKN
RARVTKGLPDVVAIMEDKSLCLTCFAEGDPMPEMFWLKNDREIVSVERFSVARDNNCTTL
TIYSVCMEDSGNYSVFVRNKYGSQTVNVTVSVYKHGEKPRADAVEM
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaaagagtgacgtaccggtgccaggaggaggagaaggggcagatgtctcac
agcatggagctgtcctcacagatcaagaaaaagaaatttaaatccagtgatgaagaggcc
tccctgtctgagttctatcccatcatccccggcaacatcatgtctgtcaaagagattctg
acggagccaaagttcccacgccacaggacatgggaggtcctgagggaaaccatggataac
gatgagctccgggagagggaccaatggaccatgtttggtaatgaggcagaaaaggtagag
atcgaggtgatcaggaaccagcacatggtccgtcaacgtatggaccgcatggcgctgcgt
aaagaggcagaaaggaagatttcaacacacctgaagtttctggacgatttgagcatgaag
actccagatttttccatccctcttcgtccccacaccgtctgggagggaatggctgtcaag
ctttcctgcactgtcgagggttgtccatcaccacacgtcacctggtataaagatggagtt
cctctgacagcgtcctcacaaccctggaactacaaactgctacagaagtatggcctgaac
atgctggagattagaaggtgtagtgttgctgatgctggagaatacaaagtggtggccaaa
agctctttaggggaggcaacaacctatgccacccttgtagtgaactcgaagcgaggactt
gaggcgggaatgaaacacacccaggctgtggtccctgtaatggaggaggaggctttgttc
gacaccaccttccctccatcttatataaaagaaggagacacgctgactctgagctgccgt
ttcacttttcctctcctccccttccagcaagacgtggcctggttcagagacggagtgcct
ctccgtgcatctggtcgtctggacatacacacgaccctgcgctcctccaccctcagcctg
aagggcatgcacaaagagcacgagggtctgtacaccgtccgcctgcgcacccgagacggc
atcaccgaacacagcgcctacgtttatgtcaaagatggtcctgcagcagtgcccggagct
ccaggttctccacttcacctcaagtgctctgatgtgaacagggattacgtgtttctctcg
tgggagcctcccagcgcagacggagcgggtccagtgcagggctactacatcgagaggtgt
gaggttggcacggggaagtggctattctgtaacgagcttgttcagaagctgtgtcattac
ccagttatgggtttaaaggaaaacaccatgtaccagttcagagtgtgtgcagtgaaccag
gctggcgtgggacgcccgtctaaactctccaaacccatcatcacctctgaccccatggag
cccagcaggactatggtggtcaaggtggatagaggcagagagatcgtgatcactaaggac
cagctggaaagtcagatccgagtccctttttccccaactgatgtgcgagtgtgtgagtta
agtgacacttacgtcgtgatgtgctggactgagccggatccacggggcaaagagccactc
acctactttgtggagcggtccatagctggccaggagagctggcacctggccagcctggac
atgacgatcaacgctacgaggtttgcagcgtacgacttgcagaaaggggtggcctactgc
ttccgtgtgcgctctgtgaacaaatatggcattagtgatccatcagagcccagccaaccc
gtgtcgctaggagaagctctcgatgtccctgctgcaccccactgtgttcaggccattagg
gatacagacaggtcaatccttctaatgtggaaagagccaaagagcacagagggaattctg
ggatattacctgtactgcaatgagctggggagctcggagtggagaaccattaacaacaaa
ccagtcacaagcaccaggttcttggtgcatggcctcaggaccaataagaagtacgtgttc
agagtgaaatcagtgggccgagcgggaaacagccgctactcagacgagtctgagccaatc
ctggtccaggcagctaaattcgctccatctgccccatctgccatttcaattcttcactgt
acgggcactgaaatggtgattggctggcgagctcctgtcaataatggtggagatccggtg
catggctactacctggatcagcgggaaaaatcccagagcacgtggagcgaggtcaacgtt
aaacctgtcaaagagagagtgtacacagttcctggtcttctagaagggtgttattaccag
ttccgtgtcatcgcagccaacatggtcggagtcggcaaaccctctggacctagtgaggct
tttctgtgtgaaaagtggacgatgcctgaacccggctgcccatatgacctggagttgaga
gaggtgcggcaggaatctctggttctgctgtgggcggagcctctgtaccaaggtcagtca
caaatcactggttatgttgtggagatcagtgagggggaggactcagaggactggaccgca
gtgacccaggaaccaatcacagacacgtacctaaaggtttctgggctgaaggcaggtcag
acatatcgtctccgtgtgtgtgccatcaacaatgctggagtgggaagaccttccttcccc
acagaccccatcaaagcccaggctgacccagcaaccagagacatcgagattggggttgat
aatgatggcttcatctgcttgagctttgaagcacctgagacacttgaccaaatccagttt
gagtggaagaagaactacaaaaaggccattgatgcaggacgagcccacttggagaccaag
caaaataaatctgttctcaccttcagtgcagctgcggaggaggatcttggtctttacact
gctgaagtgattggcaggcctgacatctcctctagctttaatttcactgctgaagatctg
gagagactcatggagttgagctggcacattaggaaccctcttatagcgctgcgctctgag
ggctggcaggtggatgtgtcggagcaggggaatgtgagactgtggctgcagacggagccc
ctgtccaacgccgcagagctgcacatgatcctcaacgaccgagagatctcctccacaccg
gcgcgtaagatcaactttgacaaggcaaacggtctggtggagattctgttcgatcagctg
tcgaaggaggacgagggctcgtacacggcacagctgaaggacggcagagccaagaaccag
ttcaccctcgtcctggtggatgaaaagttcaggcaaaccctggccaagtcacaggccaag
cgtcgggactggaagagacgctcaggaccctactttgaggagtttttgtcatggactgtg
acagaggactgtgagctgattatgaaatgcaaggtgacgaacatgaacaaggacacgaag
atgaagtggtttaaggatggtggagagatcactcagtttgtgtatgagccgtctggagtg
agcacatttaccgttccgcaggtgactaagaaggaagccggcgtgtacagggccgtggtg
gctgatggtagaggagaggatgagagcattctagagttagtggacaatgagttcgagcgg
ttgatgcagtgcctaagcagaaattgtgctctctctgctggtcccatgaggattcagtgc
acagcggctggctttaagctctactgttctctgaagtactatctgagctacatgaagacc
agctggcacttcaaagagaggaggatcgatcaggatgagaggaccaagcctggcaacagc
atgcagaagctctggatcgagatcttcaaccccactgaaaacgacaaaggaaaatacacc
ctggagatgtttgatgggcaggaaacacacaaacgctctctggatttgtctggacaagct
tttgcagatgctctgctggaataccagaggctgaagcaggtggcaattgcagagaaaaat
cgtgccagagtcacaaagggattaccggatgtggtggccatcatggaagacaagtctctg
tgtctgacctgtttcgctgagggtgaccccatgccggagatgttctggctgaagaacgac
agggagattgtctctgtagagcgctttagtgtggccagagacaacaactgcacaaccctc
accatctactcagtctgtatggaggattcaggcaactacagcgtgtttgtacgcaacaag
tacggctcgcagacggtaaacgtgaccgtgagtgtgtataaacatggtgagaagccacgg
gccgatgcagtggagatgtag
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