KEGG   Pangasianodon hypophthalmus (striped catfish): 113533052
Entry
113533052         CDS       T05759                                 
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
  KO
K16478  nephrocystin-4
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:phyp03037]
    113533052 (nphp4)
Cilium and associated proteins [BR:phyp03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   113533052 (nphp4)
SSDB
Motif
Pfam: NPHP4_C2_3rd NPHP4_C2_2nd Ig_NPHP4_1st Ig_NPHP4_4th Ig_NPH4_3rd Ig_NPHP4_2nd NPHP4_SK
Other DBs
NCBI-GeneID: 113533052
NCBI-ProteinID: XP_026780683
LinkDB
Position
Unknown
AA seq 1415 aa
MRGDITHAVQMSEWKRIFDENRVIPPPNQTARLAQGPSQAFQLVLERLDGLHLNQAEEVR
SYRFELRVSLFDNNLHRFFGRTWKSEPHQATKRNQEQPSKVHFNEVVYFHTSLCLASVVA
VVELVSLSPGTDTSQNAVGQGFGILQLFSGQAEGEGRLTLFHGTPRALLHPTLRDPLQMN
AVLSAIEGTQLLYYLQPHPALNPIMHLLPPNIMVSGHELIPGVLPPSDSTGDALQRPRLL
PAFSCVLERVCVSLAPSVQAFEADLLERLNNDRNNTGMGAEVRSVVVQERRLHVGVHNGL
GWVDGPQVMVLEPRAGGSGGLKQSSTETNSSALMLRGNVELRMIRHPAFSLLFQLEYVFS
VPLAGDGKMPSMAVQRAVFMQCVRWGVWSPFSDPDGPYESVCVSLQGGALPNPYGVMVYT
AHTHQTDAERSVIKFKFIYNTEGTTSTATPKSISQEKPQPKKWHVTSQDESKLGLEASPL
RTTRGPGLSLSQLAVASHYPTLSHTTGSPWQQQLPAPLALSPMASAHQLSHVVHPAVGIA
HLEVSAMEREGMRDAPEEECDLHELTFTPVHAPVITLGTHTTSSSRTGSRGFLAHLFSSR
FPEIRDDLNQVAELLDPDEPVNFDPHREEADPLQANTLLLQFLAFTRVHQAGVNMEWPST
VHFTFQLYRFPPVTTQRLKLVASEASSRPDYPCILFVTNRDGSVGSGPPGLQLQYRVDPA
FLKPGERVWFLRYLALHTLHIDVWDSDSILLIGSAAVQLKHLLRQGRAAVQVIHELEVIS
TEYLQDASLAREHAGGQRAMPAMTVYTIVKGRLHIRLGNIGGVVQKNPNSSVLLPPSRSH
VIQPSQTPTGFQGGSLSSNTILNLNARNARRAQRLPDIDGELASLLQSRMREVDGARLQS
RGETEEVRQRKIDRMAAVRQYEENTTSNTQEKASYMRRKEDRAQHSQDLRLIEAYRERCK
VEGIINMLSQAITTTHTIYATLGTAEFFEFVLKNPFNIPQTVTIECEDPELSVIVNAEEW
RYFKDLTKTCTPLEVEMFHMKEGSSTPQVYLRPRESIHIPLKYQSFVSGHVLLSQDSKSS
NSLHFAHHQQYNTVMAKSIKVFFRAADSQPLAICQVRVEPTPHIVDQTFRFYQPELSFFK
KAIRLPPAEPGKPDACSRLQVRCSDPNVICHVISTAPGEPQDIYLKVPGAPSPQIKTFVI
TVFNDPWLASPTQTWQVYMHYLQKMDISCVCGTLSWHSLVLRGTQSIRKVKCYTSHPLEL
QVDPEEVFALPALAVQDIRLGVKALHSGSCFRYLNVVDVDTRQLVASWLLCLTCRQPVIS
RAFEIQVPVGGGRGSNKKISFTNPYPSSRGFRLCSDHPDLLQFKEEKFQIEGGASYNIGL
RFAPSQSAGTEEILVFINDLDDKNEETYCIKVVYR
NT seq 4248 nt   +upstreamnt  +downstreamnt
atgagaggagatataacgcatgccgtccaaatgtcggagtggaaacgcattttcgatgaa
aaccgagtgattcctcctcctaaccaaacagcccgcttagcacagggcccgagccaggct
ttccagctcgtgctcgaacgactggacggccttcacttaaaccaggctgaggaggtgaga
tcgtacaggttcgagctgcgtgtctctctgtttgacaacaatcttcatcgtttctttgga
aggacatggaagagtgaaccacatcaggccactaagcgaaatcaggagcaacccagcaaa
gtgcattttaatgaggttgtatacttccacacgtctctgtgtttggcctcagtggtggct
gttgtggagctggtttctctctctcctgggacagacacttcccagaatgcagtggggcag
ggctttggcatcttgcagctcttctctggacaagcggagggagagggcaggttgactctg
ttccatggtactcctcgagctctgctacacccaacactgagggacccactgcagatgaat
gcagtgttgtcagcgatagagggaactcagctgctgtattatctccagccacaccctgcc
ctcaatcccatcatgcacctactcccacccaatatcatggtctctggccatgaactcatc
cctggagtgcttcctccaagtgatagcacaggagacgctctgcagagacctcggctgctc
ccggcattctcatgtgtgctggagagggtgtgtgtgtccctcgctccctccgtacaggcc
ttcgaggcagacttgctagagaggctgaacaatgatcgcaacaacacgggaatgggtgcg
gaggtgcggtcagtggtggtgcaggagcgaaggctgcacgttggtgtccataatggcctg
ggctgggtggatggacctcaggtaatggtgctagagcccagggctgggggaagcggtggc
ctcaaacagagttctacagagacaaacagctctgccctgatgctacgtggtaacgtggag
ctgagaatgataaggcacccagccttcagcttgctcttccagctggagtacgtcttctcc
gttccccttgccggagatgggaagatgccctccatggccgtgcagagagcggtgtttatg
cagtgtgtgcgctggggcgtatggagtcctttctctgatcctgatggcccttatgaaagt
gtgtgtgttagcttgcagggtggagccctacccaacccgtatggagttatggtttacaca
gcacacacacatcagactgatgcggaaagaagcgttatcaaattcaagtttatctacaac
acagaaggcaccacttccactgcgacgccaaaatcaatttcccaggaaaagcctcagcct
aagaagtggcatgtcacatcccaagatgaaagcaagcttggacttgaagcttcaccactg
cgcaccacccgtggtcctggactctcactctctcagctggctgtggcttctcactaccca
actctgagccacacgacggggtcgccatggcaacagcagcttcccgctccactcgctctc
tccccgatggcgtcggcccaccagctgtcacacgtcgtacatcctgctgtaggcatagca
cacctagaagtcagtgcgatggagagagagggaatgagggatgccccagaggaagagtgt
gatctacacgaactgaccttcacccctgtccatgctcctgtcatcacgctgggaacacac
acaaccagctccagcaggacgggttctcgaggattcctcgctcatctcttctcctcccgc
ttccctgaaatccgtgatgacctcaaccaagtggctgagcttctcgatcctgatgagcct
gtgaactttgaccctcacagagaagaggcagatccactgcaagccaatacactcctcctt
cagttcctggcttttaccagggtccatcaggcaggtgtgaatatggaatggccgagcacg
gtacattttacctttcagctgtaccgcttccctcctgtcaccacgcagcgcctcaagctt
gtggcatctgaggccagttcgaggcctgattacccctgcattctgtttgttaccaacagg
gacggcagcgttggatcaggccctcctgggctgcagttgcagtaccgtgtcgatcctgcc
ttcctaaagcctggcgagcgtgtatggttcctccgctacctggcactgcacaccctgcac
atagacgtgtgggacagcgactcgatactgctcatcggctctgctgctgttcagctgaag
catctgttgcgtcagggtcgagccgctgtgcaggtgattcatgagctggaggtcattagc
actgagtacctgcaggatgccagtctggcaagagagcatgcaggtgggcagagggccatg
cctgccatgactgtctacaccattgtcaaaggcaggctgcatatccgactgggaaacatc
ggtggtgtggtgcagaaaaacccgaactcgtctgttcttctccctccatctcgctctcat
gtcattcagcccagccagactcccacaggctttcaaggaggcagtctgtcctcaaacacc
atcctcaacctcaacgcacggaacgcgaggcgggcccagcgtttgccagatattgatggc
gagttggctagtctcctgcagagtcggatgagagaagtggatggtgcccggctgcagagt
cgaggtgaaacagaggaagtgcgtcagaggaagattgacaggatggcagctgtccgtcaa
tatgaagaaaacaccacatccaacacacaggagaaagccagctatatgaggagaaaagag
gatcgggcacagcactctcaggacctgcgtttgatagaggcctatcgagaacgctgcaaa
gtggagggcatcattaacatgctgagccaagccatcactactacgcacacaatctatgct
acactcgggaccgctgaattcttcgaatttgtgcttaagaaccctttcaacattcctcag
acggtcaccattgagtgtgaagaccctgagcttagtgttatagtgaacgctgaggaatgg
aggtattttaaagacttgacaaagacatgcactccgttggaggtggagatgtttcacatg
aaggagggtagctcgacacctcaggtgtacttgcggcccagagagagcatccacatccct
ctgaagtaccaaagctttgtctctgggcatgtcctgctttctcaggactcaaagtcttct
aacagtctacattttgcacaccaccagcagtataacacagtgatggctaaatctatcaag
gtgtttttccgagcagcggacagtcagccgctggccatctgccaagtgcgagtggagcca
actccccacatagtcgaccagacctttcgcttctatcagcccgagctctccttctttaag
aaagccatccggctgcctcctgctgaacccggcaaaccagatgcttgttccaggctccag
gtgcgctgcagcgaccccaatgtgatctgccacgtcatctccacggctccaggagaacct
caggacatttatctgaaagtgcctggggctcccagtccacagattaagacgtttgtcatc
actgtgttcaatgatccctggctggcctctcctactcaaacgtggcaggtgtacatgcat
tacctgcagaaaatggacattagctgtgtgtgtggtacgctcagctggcattccctggta
ctgcgtggcacacagagcatccgcaaggtcaagtgctacacttcccaccctctggagctg
caggtggacccagaggaagtgtttgctctccctgctctggctgtgcaggacattaggctg
ggagtgaaggctctgcactccgggagctgcttccgctaccttaacgtggtggatgtggac
acgaggcagctggtggcatcctggcttctgtgcctcacctgcaggcagcctgttatatca
cgggcgtttgagatccaagtgcctgtagggggtgggagaggcagcaataagaagatcagc
ttcaccaatccctatccttccagcagaggcttcaggctgtgctcggaccatccagaccta
ctgcagttcaaagaggaaaagtttcagattgagggaggtgcgagctacaacatcgggctg
cgttttgctcccagtcagagtgccggtacagaggagatcctggtcttcatcaacgacctg
gacgataagaacgaggagacgtactgcatcaaagtcgtctacagataa

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