Pangasianodon hypophthalmus (striped catfish): 113533065
Help
Entry
113533065 CDS
T05759
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113533065 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113533065 (washc5)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Others
WASH complex
113533065 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Strumpellin
RSF
RNA_pol_L_2
DUF3106
Motif
Other DBs
NCBI-GeneID:
113533065
NCBI-ProteinID:
XP_026780697
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MDFLAENNLCGQAILRIVSRGNAIIAELLRLSDFIPTVFRLRDKSDQQKYGDIICDFSYF
KGQEYYESKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYIVDLIRYLDDLNEGVY
IQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSADS
NLDDICKLLRSTGYSSNPGAKRPNNYPESYFQRVPISSTFISMVIGRLRSDDIYNQARHT
FTLHIIEKTFLXXXAAMLYVCLYFCPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
VEAWEPYKAAKTALNYTLDAANIREQASRYASSVETLRPQVQQLLKEGFLREEIVLDNIP
KLLNCLRDCNVAIRWLMLHTAESVYDPNNKRLRQIKDQAISDSKYSPKILFQLLLDTAQF
EFILKEMFKQMLAEKQLKWESYKKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIA
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTSIMQESIRANPSMVTKLRATFLKLASALDLPLMRI
NQANSPDLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDK
LKDYAQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAF
SLHKGLIFNPKAKPSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSIYQSTHIPIPKYPPVDESATFIGRLCREILRITDPKATCYI
DQMNTWYDMKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQTFLNVLQKIIL
KDKAVVDIFKALLNAVNPVKGIVATASKVYTNAVAKTQKIWPAYLESIMKVGQMQILRLQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNTLLYEFTAYLEAA
GIHNPLNKIYITTKRLPYFPTVNFLFLIAQLPKLQYTKNQGMTCRRAADPVDWVPLVLGL
LTLLKQFHSRYTEQFLALIGQFIRSIMEQCTSQKIPDMPADVVGALMFLEDYVRYTKLSR
KVVEAHIPSFIFDEFRTVLQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggacttccttgccgagaataacctgtgcggccaggccatcctgaggatcgtgtcccgg
ggaaacgccatcatcgctgagctgctgcgcctctccgacttcatccccactgtgttcagg
ctccgagacaagagcgaccagcagaaatatggagacatcatctgcgacttcagctacttc
aagggtcaagagtactacgagagcaagcttgaggccaagccagaacttcaggacctggac
gaggagttccgggaaaacaacattgaaatattgtctcgcttttatctggccttcgaaagt
gtccataaatacattgtggacttaataaggtacctggatgaccttaatgaaggtgtctac
attcagcagactctggaaacagtcctgctcaacgaagatggaaaacagcttttgtgtgaa
gctctgtatctgtacggcgtcatgctgttggttatagatcagaaaatagaaggagaagtc
agagagaggatgctggtgtcttactacagatacagtgctgctcgatcctcagcagactca
aatctggatgatatctgtaaactcttaagaagcaccggttactccagtaaccccggggct
aaacggcccaataactaccccgaaagctacttccagagagtccccatcagctccaccttc
atcagcatggtcataggccgcctgcgctccgacgacatctacaaccaggcacgacacact
ttcacgttgcatatcattgaaaaaacatttttannnnnnnaagcggccatgctgtatgtc
tgcctgtacttctgtccctccatcttacacacacagcaggccaagatgagggagattgtg
gacaagtacttccctgataactgggtcatcagtatatacatgggcatcactgtgaactta
gtggaggcatgggagccttataaagcagccaagactgcactgaactacaccctggatgca
gcaaacatcagagagcaggcttctcgctacgcctccagcgtggagaccctccggccgcag
gtgcagcagctgctgaaagagggcttcctgagggaggagatcgtcctggacaacatcccc
aaactgctgaactgcctgcgggactgcaacgtcgccatccgctggctgatgctgcacact
gcagagtcagtgtatgatccgaacaacaagagactgcgtcagatcaaagatcaagcgatc
agtgactccaaatacagccccaagatcttgtttcagctgctcctggacacggctcagttt
gagttcatactcaaagaaatgttcaagcagatgttggccgaaaaacagctgaaatgggag
agctataagaaagagggatcggagaggatgactgaactggctgaggtgttttctggggtc
aagcctctcaccagggtggagaaaaatgaaaacctgcaggcgtggttcagagagatcgct
aaacagatcgagtctctgaactatgaagactccacagcagcagggaggaagacggtgcag
ctcattcaggctctagtagaagtgcaggagttccaccagctggagtcgaacctgcaggtg
tgtcagttcctggctgacacacgcaagttcctgcaccagatgattcgcacaatcaacatt
aaagaggaggtgctgatcaccatgcagattgtgggggatttgtcgtacgcttggcaactt
atagatagtttcacatccatcatgcaggagagtatccgagccaacccgtccatggtcacc
aaactccgagcaacgtttctgaagttggcctcagctctggatcttcccctcatgcgcatc
aatcaggccaacagccctgatctgctcagcgtgtcgcagttctactccggagagctggtg
gcctacgtcagaaaggttctgcagatcattccagaaagcatgttcacctcgctggctaaa
atcatcaagctgcagatccatgacatcatggaggttcctacacggctggacaaggacaag
ctgaaggactacgcccagctcggggcgcgctatgaggttgccaaactcacccacgccatt
tccatcttcactgagggaattctgatgatgaaaacaacacttgtcggaatcattaaggtg
gatcccaagcagctgctggaggatggaataaggaaggagcttgttaaacgagttgctttt
tctctacacaaaggcctcatctttaaccctaaagctaaacccagcgagctgatgcccaag
ctgaaggaaatggccgccaccatggacggcttctatcgctccttcgagtacatccaggac
tacgtcagcatctacggcctgaagatctggcaggaagaggtttcccgcatcatcaactac
aacgtggagcaggagtgcaacagcttcctcaggaccaagatccaagactggcagagcatc
taccaatcgacacacattcccattcccaaatacccgccagtggacgagtcggccactttc
attggccgtctctgcagggagatcttgaggatcactgatccgaaagcaacatgttatata
gatcagatgaacacctggtatgacatgaagacgcaccaggaagtgaccaataacaggctg
ttctcagagatccaggacactctgggcacatttggcctgaacggactcgaccgtctcctg
tgctttatgatcgtcaaggagctacagactttcctgaatgtacttcagaagatcatcctc
aaggacaaagccgtggttgacatctttaaagctctgctgaatgctgtgaacccggtgaaa
ggcattgtggccacagcaagcaaagtgtacactaacgctgtagccaaaacccagaagatc
tggccagcatatctggagtccattatgaaggttggtcagatgcagatcctgaggctacag
atagcaaatgagttgaactactcctgcaagtttgactccaaacatctcgcagcagctctg
gagaatctgaacaaatctctgctcgctgatattgaagctcactaccaggacccgagcctg
ccgtaccctaaagaggacaacaccctgctctacgagttcactgcctatctggaagcagct
ggaatacacaacccactgaacaaaatctacatcaccaccaagcgcctgccgtacttccct
actgtcaacttcctcttcctcatcgcccagctgcccaaactccagtacactaaaaaccaa
ggaatgacctgccggagagcagctgatccggtggactgggttcctctcgtcctgggttta
ctgacgctgctcaaacagtttcactccagatacaccgagcagttcctggctctcattggc
cagttcatccgctccattatggagcagtgcaccagtcaaaagatccccgacatgccagct
gatgtggtaggagcattgatgtttttggaagactatgtgcgctatacaaagctatccaga
aaggtggtggaagctcacatcccaagtttcatttttgatgaatttagaaccgtgttgcaa
tga
DBGET
integrated database retrieval system
