Pangasianodon hypophthalmus (striped catfish): 113533082
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Entry
113533082 CDS
T05759
Symbol
cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04142
Lysosome
phyp04144
Endocytosis
phyp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113533082 (cltc)
04142 Lysosome
113533082 (cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113533082 (cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113533082 (cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113533082 (cltc)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
113533082 (cltc)
Exosome [BR:
phyp04147
]
Exosomal proteins
Proteins found in most exosomes
113533082 (cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
113533082
NCBI-ProteinID:
XP_026780728
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMSDPNS
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMDGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISPKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGHAAAQSGNWEDLVKFLLMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPADAWKESQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
TKVKQLSLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQ
EEKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LDASESLRKEEEQATEAQPIVYGTPQLMLTAGPSVAVPPQQPYGYGYGAPAGYGQPAQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccagaacctgggcatt
aacccagcgaacattggcttcagcacgctcactatggagtcggacaagttcatctgcgtg
cgggaaaaggtcggagagcaagcgcaggttgtcatcatcgacatgagcgaccccaattcg
cccatccgcaggcccatctctgcagatagtgcaatcatgaacccagccagcaaagtgatc
gcccttaaagacgcggcgaaaaccctccagattttcaacattgaaatgaagagcaagatg
aaggcgcacaccatgactgacgatgtgacattctggaagtggatctccctcaacaccgta
gcactcgtaacggacaacgcagtctaccactggagtatggaaggcgactcacaacctgtt
aaagtgttcgaccggcattccagcttagcaggctgccaaattatcaactaccgcaccgac
gccaaacaaaaatggcttcttcttattgggatttctgcacagcaaaaccgtgtggtagga
gcaatgcagctgtactctgtggacaggaaggtgtcgcagcctatcgagggccatgctgca
ggttttgctcagttcaaaatggatggaaatgctgaagaatccacactgttttgctttgcc
gttcgcgggcaagcaggaggaaagctgcacatcattgaagttggaacacctccatctggc
aatcagcctttcccgaagaaagccgtagatgtgttctttccaccagaagcccagaacgac
ttccctgttgctatgcagatcagccccaagcaggatgtggtctttctcatcaccaaatat
ggctacatccacctgtatgaccttgaaactggcacttgcatctacatgaacaggatcagt
ggggagaccatcttcgtcaccgctcctcacgaggctacttctggcattattggagtcaac
agaaagggacaggtgctgtcggtgtgtgtggaggaggagaacatcatcccctacatcacc
aacgtcctgcagaaccctgatctggcgctgcgcatggccgtacgcaacaacttggctggc
gcagaggagctcttcgcacgcaagttcaacactttgttcgcagggggcaactactctgag
gctgccaaagtagctgccaacgcaccaaagggcattttgcggaccccagacaccattcgg
cgtttccagagtgttcccgcccagccaggccagacctctcctctgctccagtatttcggc
atcctgctggatcagggccagctcaacaagttcgagtccctggagctgtgcaggcctgta
ctgcagcagggccgcaaacagctgctggagaagtggctgaaggaagataagctggagtgc
tctgaagagctgggtgatttagtgaaatctgtggacccgactctcgctctcagtgtctat
ctgagagcaaatgtccctaacaaagtcattcagtgttttgccgagaccggccaattccag
aaaattgtactgtatgcaaagaaggtcggttacactccagactggatctttctgcttcga
aatgtgatgcggatcagtcctgagcagggcctgcagttctcccagatgttggtgcaggat
gaggaaccactggctgacattacccagattgtggatgttttcatggagtataacctgatc
cagcagtgcacttccttcctgctggatgctctaaagaacaaccgacccactgaaggccca
ctgcagacacggctgctggagatgaacctgatgcatgctcctcaggtggctgatgctatt
ttgggaaaccaaatgttcacccactacgaccgagcccatgtggcccagctttgtgagaaa
gccggattgctgcagagagccctggaacactacactgacctgtatgacatcaaacgtgct
gtggtgcacacccacctgctcaaccccgagtggctggtgaacttttttggctcactgtca
gtggaggactctctggagtgcctgagagccatgctctcggccaacatccgccagaacctg
cagatctgcgtccaggtggcctccaaatatcacgagcagctcaccacccagtccctcacc
gagctctttgagtctttcaagagcttcgaaggtctgttctatttccttggctccatcgtg
aacttcagtcaggatccagaggtccatttcaagtacatccaggcagcctgtaaaactgga
caaatcaaagaggtggagagaatctgcagagagagtaactgctacgatgctgagcgtgtg
aagaattttcttaaggaagctaaactgactgatcagctgcctctcatcatcgtgtgcgac
cgctttgactttgtccacgacctggtcctttatctgtaccgcaacaatctgcagaagtac
attgagatttacgtgcagaaggtgaaccccagccgcttacctgtggttattggtggcctg
ttggatgtggactgctcagaggacgtcattaagaacctgatcctggtggtccgaggacag
ttttccaccgatgagctggtggctgaggtggaaaagaggaacagactgaagctgctgctg
ccctggctggaagcccgtattcatgagggatgtgaagaacctgctacccacaatgccctg
gccaagatctacatcgacagcaacaataaccctgagcgattcctcagagagaacccgtac
tacgacagccgtgtggtgggcaagtactgcgaaaagagggacccccatctggcttgtgtg
gcttatgagagaggacagtgtgaccaagagcttattaatgtatgcaatgaaaactccctc
ttcaagagtctgtctcggtatttggtgcgtcgtaaggaccctgagctgtgggccagtgtt
ctcctggagagcaacccttacagaaggccactgatagatcaggtggtgcagactgctctc
tcggagactcaggacccagaagaggtgtctgttacagtcaaagccttcatgactgctgat
ctgcctaatgagctgattgagcttcttgagaagattgttttggataactctgttttcagt
gagcacaggaaccttcaaaaccttctgatcctgacggccatcaaagctgatcgcactcgc
gtaatggagtacatcaaccgcctggacaactacgatgcccctgacattgccaacatcgcc
atcagcaacgaactctttgaagaggcttttgccatcttcaggaagtttgatgtcaacaca
tctgcagtgcaggttctgattgagcacattggcaacctggaccgggcctatgaatttgct
gaacgctgcaatgagcctgcagtgtggagccagttggctaaagctcagctgcagaaaggt
ctggtaaaggaagccatcgattcctacatcaaggctgatgacccatcagcatacatggaa
gtgggacatgctgcagcccaaagtgggaactgggaggatttggtcaagttcttgctgatg
gcacgtaagaaggctcgtgagtcatatgtagagactgaactgatcttcgcattggctaaa
accaaccggctggctgaactggaagagttcatcaacggcccaaacaacgcccacatccag
caagttggtgatcgatgctatgatgagaagatgtatgaggcagctaagctgctgtataac
aacgtgtccaactttggccgcctggcttccactctggtccacctgggagagtaccaggct
gctgtggacggagcacgcaaggccaacagcacacgaacctggaaggaggtctgttttgcc
tgcgtagatgggaaggaattccgtctggcacagatgtgcggcttgcacattgttgtccat
gctgatgaacttgaggagctcattaactactaccaggaccgtggctatttcgaggagctg
atcaccatgttggaggcggctctggggcttgagcgtgctcacatgggcatgttcactgag
ctggccatcctctattccaagttcaaaccacagaagatgagggagcacctggaacttttt
tggtccagagtcaatattcccaaggtcttgagggcagcagaacaggctcatctgtgggct
gagctggtcttcctttatgacaaatatgaagaatacgataacgctatcatcaccatgatg
aaccaccctgcagatgcctggaaggagagccagttcaaagacattgtcactaaggtggct
aatgtggaactgtattacaaagccatccagttctatctggagttcaagcctctgctgctg
aacgatttgctcatcgtcctgtccccaaggcttgatcacacacgcgctgttaacttcttc
actaaggttaaacagctgtctctggttaaaccatacctgcgatctgtacagaaccataac
aacaaatcagtcaatgaagcactaaacaatctcttcataatagaggaggactaccaggct
ctgcgtacatccatcgatgcctatgacaactttgataacatatctctggcccagagcctg
gagaagcatgagctcattgagttcaggagaattgctgcctaccttttcaaaggcaacaac
cgctggaagcaaagtgtggaactctgcaagaaggataagctctacaaggatgccatgcag
tatgcgtcagagtcgaaggatacagagctggctgaggagctgctgcagtggttcctacag
gaggagaagaaggagtgctttgctgcctgtctcttcacatgctatgacctcctgcggccc
gacgtggtgctggagacggcctggaggcacaacatcatggacttctccatgccctacttc
atccaggtcatgagggagtacctcagcaaggttgatgcaattaaggaaaaggttgataag
ctggatgcgtccgagtctttgaggaaagaggaggagcaggccacagaggcacaacccatt
gtttatggcacaccccagctgatgctcaccgcaggaccaagcgtcgccgttcctcctcaa
cagccttacggctacggctacggcgcccccgctggctacggtcagccagcgcagcccggc
ttcggctacggcatgtag
DBGET
integrated database retrieval system
