KEGG   Pangasianodon hypophthalmus (striped catfish): 113533238
Entry
113533238         CDS       T05759                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137  Mitophagy - animal
phyp04140  Autophagy - animal
phyp04144  Endocytosis
phyp04145  Phagosome
phyp04148  Efferocytosis
phyp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113533238
   04145 Phagosome
    113533238
   04140 Autophagy - animal
    113533238
   04137 Mitophagy - animal
    113533238
   04148 Efferocytosis
    113533238
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113533238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113533238
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113533238
   04031 GTP-binding proteins [BR:phyp04031]
    113533238
Membrane trafficking [BR:phyp04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    113533238
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113533238
  Exosomal proteins of other body fluids (saliva and urine)
   113533238
  Exosomal proteins of colorectal cancer cells
   113533238
  Exosomal proteins of bladder cancer cells
   113533238
GTP-binding proteins [BR:phyp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    113533238
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW ATP_bind_1 PduV-EutP nSTAND3 Septin AAA_16 AAA_7 AAA_22 NTPase_1 G-alpha AAA_24 ATPase_2 AAA_5 SRPRB ATP-synt_ab ABC_tran AAA_14 NACHT DAP3 MCM
Other DBs
NCBI-GeneID: 113533238
NCBI-ProteinID: XP_026781023
LinkDB
Position
Unknown
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVDQAFQTIARNALKQETEV
EPYDFPDQIKLRDDRPVTSNDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctctcgcaagaaggtgctgcttaaggtgatcatccttggtgattctggggttgga
aagacttctttaatgaaccagtatgttaataacaagttcagcaaccaatataaggccacg
atcggcgccgactttttgaccaaagaggtgatggtggacgacaggctggtcaccatgcag
atttgggacacagccggacaggagcgttttcagtctctgggcgtggcgttctacaggggc
gccgactgctgcgtgctggtctacgacgtcacatctccaaacacctttaagactctggac
agctggagggacgagttcctgatccaagctagccctcgcgaccctgagaacttccccttc
gtcgtgctcggaaacaagatcgacttggagaacagacaggttactacaaagcgagctcag
gcatggtgtcaaagcaagaacaacatcccttattttgagaccagtgccaaagaagcgatc
aacgtggaccaggctttccaaaccattgctcgcaatgcacttaaacaggagactgaggtg
gagccatacgattttcccgaccagatcaagctacgagatgacagacctgtcacctcgaac
gatggctgcagctgctga

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